Literature DB >> 34227631

Biosensing with DNAzymes.

Erin M McConnell1, Ioana Cozma, Quanbing Mou, John D Brennan, Yi Lu, Yingfu Li.   

Abstract

This article provides a comprehensive review of biosensing with DNAzymes, providing an overview of different sensing applications while highlighting major progress and seminal contributions to the field of portable biosensor devices and point-of-care diagnostics. Specifically, the field of functional nucleic acids is introduced, with a specific focus on DNAzymes. The incorporation of DNAzymes into bioassays is then described, followed by a detailed overview of recent advances in the development of in vivo sensing platforms and portable sensors incorporating DNAzymes for molecular recognition. Finally, a critical perspective on the field, and a summary of where DNAzyme-based devices may make the biggest impact are provided.

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Year:  2021        PMID: 34227631      PMCID: PMC9136875          DOI: 10.1039/d1cs00240f

Source DB:  PubMed          Journal:  Chem Soc Rev        ISSN: 0306-0012            Impact factor:   60.615


  292 in total

1.  A deoxyribozyme that harnesses light to repair thymine dimers in DNA.

Authors:  Daniel J-F Chinnapen; Dipankar Sen
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-22       Impact factor: 11.205

2.  Target-Induced and Equipment-Free DNA Amplification with a Simple Paper Device.

Authors:  Meng Liu; Christy Y Hui; Qiang Zhang; Jimmy Gu; Balamurali Kannan; Sana Jahanshahi-Anbuhi; Carlos D M Filipe; John D Brennan; Yingfu Li
Journal:  Angew Chem Int Ed Engl       Date:  2016-01-08       Impact factor: 15.336

3.  Low-cost and highly efficient DNA biosensor for heavy metal ion using specific DNAzyme-modified microplate and portable glucometer-based detection mode.

Authors:  Jin Zhang; Ying Tang; Liumei Teng; Minghua Lu; Dianping Tang
Journal:  Biosens Bioelectron       Date:  2015-01-02       Impact factor: 10.618

4.  Catalytic nucleic acids (DNAzymes) as functional units for logic gates and computing circuits: from basic principles to practical applications.

Authors:  Ron Orbach; Bilha Willner; Itamar Willner
Journal:  Chem Commun (Camb)       Date:  2015-03-11       Impact factor: 6.222

5.  Programming a Target-Initiated Bifunctional DNAzyme Nanodevice for Sensitive Ratiometric Electrochemical Biosensing.

Authors:  Yunrui Li; Yuanyuan Chang; Jing Ma; Zhongyu Wu; Ruo Yuan; Yaqin Chai
Journal:  Anal Chem       Date:  2019-04-12       Impact factor: 6.986

6.  Label-Free and Enzyme-Free Colorimetric Detection of Pb2+ Based on RNA Cleavage and Annealing-Accelerated Hybridization Chain Reaction.

Authors:  Zhijun Huang; Junman Chen; Zewei Luo; Xiaqing Wang; Yixiang Duan
Journal:  Anal Chem       Date:  2019-03-14       Impact factor: 6.986

7.  In vitro selection and characterization of a highly efficient Zn(II)-dependent RNA-cleaving deoxyribozyme.

Authors:  J Li; W Zheng; A H Kwon; Y Lu
Journal:  Nucleic Acids Res       Date:  2000-01-15       Impact factor: 16.971

Review 8.  Isothermal nucleic acid amplification technologies for point-of-care diagnostics: a critical review.

Authors:  Pascal Craw; Wamadeva Balachandran
Journal:  Lab Chip       Date:  2012-05-16       Impact factor: 6.799

9.  Biostable L-DNAzyme for Sensing of Metal Ions in Biological Systems.

Authors:  Liang Cui; Ruizi Peng; Ting Fu; Xiaobing Zhang; Cuichen Wu; Huapei Chen; Hao Liang; Chaoyong James Yang; Weihong Tan
Journal:  Anal Chem       Date:  2016-01-15       Impact factor: 6.986

10.  Simple fluorescent sensors engineered with catalytic DNA 'MgZ' based on a non-classic allosteric design.

Authors:  William Chiuman; Yingfu Li
Journal:  PLoS One       Date:  2007-11-21       Impact factor: 3.240

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  13 in total

Review 1.  Enhancing CAR-T Cell Therapy with Functional Nucleic Acids.

Authors:  Bruktawit Maru; Lea Nadeau; Maureen McKeague
Journal:  ACS Pharmacol Transl Sci       Date:  2021-11-17

2.  Signal-on fluorescent sensing strategy for Pb2+ detection based on 8-17 DNAzyme-mediated molecular beacon-type catalytic hairpin assembly circuit.

Authors:  Junyang Wang; Zheng Liu; Ying Li; Chuanyu Yang; Xinyue Ma; Hongxia Li; Chunyan Sun
Journal:  Anal Bioanal Chem       Date:  2022-07-13       Impact factor: 4.478

Review 3.  Recent Advances in DNA Nanotechnology for Plasmonic Biosensor Construction.

Authors:  Jeong Ah Park; Chaima Amri; Yein Kwon; Jin-Ho Lee; Taek Lee
Journal:  Biosensors (Basel)       Date:  2022-06-15

4.  Noninvasive and Spatiotemporal Control of DNAzyme-Based Imaging of Metal Ions In Vivo Using High-Intensity Focused Ultrasound.

Authors:  Xiaojing Wang; Gun Kim; James L Chu; Tingjie Song; Zhenglin Yang; Weijie Guo; Xiangli Shao; Michael L Oelze; King C Li; Yi Lu
Journal:  J Am Chem Soc       Date:  2022-03-18       Impact factor: 16.383

Review 5.  Overcoming Major Barriers to Developing Successful Sensors for Practical Applications Using Functional Nucleic Acids.

Authors:  JingJing Zhang; Tian Lan; Yi Lu
Journal:  Annu Rev Anal Chem (Palo Alto Calif)       Date:  2022-02-25       Impact factor: 12.400

6.  Programming a DNA tetrahedral nanomachine as an integrative tool for intracellular microRNA biosensing and stimulus-unlocked target regulation.

Authors:  Lianyu Yu; Sha Yang; Zeyu Liu; Xiaopei Qiu; Xiaoqi Tang; Shuang Zhao; Hanqing Xu; Mingxuan Gao; Jing Bao; Ligai Zhang; Dan Luo; Kai Chang; Ming Chen
Journal:  Mater Today Bio       Date:  2022-05-06

7.  DNAzyme-Based Lithium-Selective Imaging Reveals Higher Lithium Accumulation in Bipolar Disorder Patient-Derived Neurons.

Authors:  Claire E McGhee; Zhenglin Yang; Weijie Guo; Yuting Wu; Mingkuan Lyu; Cynthia J DeLong; Shanni Hong; Yuan Ma; Melvin G McInnis; K Sue O'Shea; Yi Lu
Journal:  ACS Cent Sci       Date:  2021-11-03       Impact factor: 14.553

Review 8.  Photochemical modifications for DNA/RNA oligonucleotides.

Authors:  Amirrasoul Tavakoli; Jung-Hyun Min
Journal:  RSC Adv       Date:  2022-02-24       Impact factor: 3.361

Review 9.  DNA-based enzymatic systems and their applications.

Authors:  Yunfei Jiao; Yingxu Shang; Na Li; Baoquan Ding
Journal:  iScience       Date:  2022-03-05

10.  A localized DNA finite-state machine with temporal resolution.

Authors:  Lan Liu; Fan Hong; Hao Liu; Xu Zhou; Shuoxing Jiang; Petr Šulc; Jian-Hui Jiang; Hao Yan
Journal:  Sci Adv       Date:  2022-03-25       Impact factor: 14.136

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