| Literature DB >> 34224308 |
Yuxin Ran1,2,3, Dongni Huang4, Youwen Mei1,2,3, Zheng Liu1,2,3, Yunqian Zhou1,2,3, Jie He1,2,3, Hanwen Zhang1,2,3,5, Nanlin Yin1,2,3,5, Hongbo Qi1,2,3,5.
Abstract
Preterm birth (PTB) is an immune-inflammatory disease that needs to be resolved. This study aimed to identify the role of interleukin-27 (IL-27), an immunomodulatory factor, in PTB and its associated mechanisms. Here, we analyzed the high-throughput of samples data from the maternal-fetal interface to the peripheral circulation obtained from public databases and reported that the elevated IL-27 was involved with the onset of PTB. Further bioinformatics analyses (e.g. GeneMANIA and GSEA) revealed that IL-27 overexpression in the peripheral circulation as well as maternal-fetal interface is related to the activation of the immune-inflammatory process represented by IFN-γ signaling, etc. In addition, IL-27 and immune infiltration correlation analysis demonstrated that IL-27 mediates this immune-inflammatory imbalance, plausibly mainly through monocyte-macrophage and neutrophils. This finding was further validated by analyzing additional datasets. Overall, this is the first study to elaborate on the role of IL-27-mediated immuno-inflammation in PTB from the perspective of bioinformatics, which may provide a novel strategy for the prevention and treatment of PTB.Entities:
Keywords: Preterm birth; immune; inflammation; interleukin-27; mechanism
Mesh:
Substances:
Year: 2021 PMID: 34224308 PMCID: PMC8806804 DOI: 10.1080/21655979.2021.1945894
Source DB: PubMed Journal: Bioengineered ISSN: 2165-5979 Impact factor: 3.269
Detail information of datasets included in this study
| Sample type | Database | Accession | Contributor(s) | Preterm Group | Term Group | Data Type | Complications |
|---|---|---|---|---|---|---|---|
| Peripheral Blood | GEO | GSE96083 | Lye S et al, 2017 | 15 | 23 | RNA-seq counts | no |
| Chorion | GEO | GSE73685 | Baldwin DA, 2015 | 8 | 7 | Microarray data | no |
| SRA | SRP139931 | Universidad de la Republica, 2018 | 4 | 4 | RNA-seq rawdata | no | |
| Placenta | GEO | GSE73685 | Baldwin DA, 2015 | 5 | 5 | Microarray data | no |
| GEO | GSE118442 | Brockway HM et al, 2018 | 8 | 9 | RNA-seq counts | no | |
| GEO | GSE73712 | Ackerman WE et al, 2015 | 5 | 5 | RNA-seq counts | no | |
| Decidual | GEO | GSE73685 | Baldwin DA, 2015 | 6 | 7 | Microarray data | no |
| GEO | GSE73712 | Ackerman WE et al, 2015 | 5 | 5 | RNA-seq counts | no | |
| Myometrium | GEO | GSE73685 | Baldwin DA, 2015 | 6 | 7 | Microarray data | no |
| SRA | ERP116770 | University of Liverpool, 2020 | 6 | 6 | RNA-seq rawdata | no | |
| GEO | GSE9159 | Mason CW et al, 2007 | 3 | 3 | Microarray data | preterm group with chorioamnionitis |
Figure 1.The mRNA expression levels of IL-27 (IL-27p28 and EBI3) and IL-27 receptor (IL-27Rα and gp130) in term and preterm pregnancies samples. (a) maternal peripheral blood, (b) chorion tissues, (c) placenta tissues, (d) myometrium tissues, and (e) decidua tissues
Figure 2.The characteristics of IL-27p28-correlated genes. (a) Pearson’s correlation coefficients of IL-27p28-correlated genes in maternal peripheral blood and chorion tissues. (b) Heatmap of expressions of IL-27p28-correlated genes in preterm and term pregnancies. (c) PPI network of IL-27p28-correlated genes in maternal peripheral blood. (d) Venn analysis of IL-27p28-correlated genes in maternal peripheral blood and chorion tissues
Figure 3.Visualizations of GO and KEGG analysis. (a, c) The network of enriched GO and KEGG terms colored by the cluster. The most significant enriched terms in (b) maternal peripheral blood and (d) chorion tissues
Figure 4.Gene Set Enrichment Analysis. The hallmark pathways associated with IL-27p28 overexpression in (a) maternal peripheral blood and (c) chorion tissues. The immune changes associated with IL-27p28 overexpression in (b) maternal peripheral blood and (d) chorion tissues
Figure 5.Correlation between IL-27p28 expression and immune sub-cells in PTB. The different immune cells in (a) maternal peripheral blood and (c) chorion tissues. The linear regression analysis for the immune cells and IL-27p28 in (b) maternal peripheral blood and (d) chorion tissues. (e, f) Pearson’s correlation coefficients between the immune cells and IL-27p28. (Th: T helper; Tfh: T follicular helper; Treg: regulatory T; Tgd: γδ T; Tem: effector memory T; Tcm: central memory T; Tc: cytotoxic T; Tex: exhausted T; Tr1: Type 1 regulatory T; MAIT: mucosal-associated invariant T; NK: Natural killer; NK T: Natural killer T. * indicates P < 0.05; ** indicates P < 0.01; *** indicates P < 0.001.)
Figure 6.Validation of IL-27p28 expression level and its role in PTB. (a) The mRNA expression of IL-27 (IL-27p28 and EBI3), IL-27 receptor (IL-27Rα and gp130) and associated genes in the peripheral blood of preterm and term pregnancies. (b) The correlations between IL-27p28 expression level and immune cells in PTB. (c) The linear regression analysis for the immune cells and IL-27p28. (d) The mRNA expression levels of IL-27 (IL-27p28 and EBI3), IL-27 receptor (IL-27Rα and gp130) and related genes in the peripheral blood monocyte of preterm and term pregnancies. (* indicates P < 0.05; ** indicates P < 0.01; *** indicates P < 0.001)