| Literature DB >> 34223276 |
Alyssa C Snider1, Tristan Darvin1, Lauren Spor1, Adedoyin Akinwole2, Cengiz Cinnioglu1, Refik Kayali1.
Abstract
OBJECTIVE: To define criteria for determining when preimplantation genetic testing for aneuploidy (PGT-A) results are suggestive of a potential balanced chromosomal rearrangement in the egg or sperm source and warrant karyotyping.Entities:
Keywords: PGT-A results; inversions; pattern detection; segmental aneuploidy; translocations
Year: 2020 PMID: 34223276 PMCID: PMC8244368 DOI: 10.1016/j.xfre.2020.12.003
Source DB: PubMed Journal: F S Rep ISSN: 2666-3341
Figure 1Classic segregation patterns in gametes and embryos. During meiosis, chromosomes involved in a rearrangement align in modified structures to allow crossing over and then segregate to daughter cells, resulting in balanced or unbalanced gametes. The resulting genetic complement, following fertilization of the egg and sperm, is indicated for each chromosome below the daughter cell. (A) Reciprocal translocations. Balanced gametes can result from alternate 2:2 segregation, segmental imbalances can result from adjacent 2:2 or tertiary 3:1 segregation, and complete imbalances can result from interchange 3:1 or 4:0 segregation. (B) Robertsonian translocations. Balanced gametes can result from alternate 2:1 segregation, and imbalances can result from adjacent 2:1 or 3:0 segregation. Imbalances resulting from segregation from a Robertsonian trivalent include complete chromosomal imbalances, rather than segmental imbalances. (C) Inversions. Balanced gametes can result from segregation of the parental chromosomes, and imbalances can result in segregation of the recombinant chromosomes. If recombination occurs within the inverted segment of a classic loop, recombinants have a terminal trisomy, followed by an interstitial disomic segment, followed by a terminal segment of monosomy, a pattern referred to here as a “stair” imbalance. Following the U-loop exchange, imbalances involve either an interstitial segment of monosomy or an interstitial segment of trisomy.
Performance of the test criteria.
| Test criteria | Follow-up obtained | No follow-up | Grand total | |
|---|---|---|---|---|
| Confirmed | Not confirmed | |||
Segmental imbalances: a terminal, segmental imbalance in ≥2 embryos, involving the same chromosome and the same breakpoint between the embryos | 32 | 1 | 22 | 55 |
Segmental and complete imbalances: 1 segmental imbalance in 1 embryo paired with a complete imbalance of the same chromosome in another embryo and a segmental imbalance of a second chromosome in 1 embryo paired with a complete imbalance of the same second chromosome in another embryo | 0 | 1 | 2 | 3 |
Complete imbalances: a set of ≥3 embryos with monosomy/trisomy of the same chromosome and a second set of ≥3 embryos with monosomy/trisomy of another chromosome. At least 50% of the cohort must include related aneuploidies. | 0 | 0 | 0 | 0 |
Rob(13;14): ≥3 embryos with chr13 or chr14 monosomy/trisomy with ≥50% of the cohort affected | 3 | 0 | 0 | 3 |
Any other Robertsonian: ≥4 embryos with acrocentric monosomy/trisomy with ≥50% of the cohort affected | 0 | 2 | 11 | 13 |
Two or more embryos with characteristic inversion “stair” pattern in any cohort size. The “stair” pattern involves a terminal segment of monosomy, an interstitial segment of disomy, and a terminal segment of trisomy. | ||||
Note: Cases in which the referring provider was notified of the suspected chromosomal rearrangement were considered “flagged.” Cases in which no response was received or the patient declined karyotyping were considered to be “lost to follow-up.” Cases were counted as “confirmed” when karyotypes were provided confirming the suspected chromosomal rearrangement. Cases were counted as “not confirmed” when cytogenetic analysis failed to identify the suspected translocation.
Figure 2Examples of cases flagged for karyotype review. (A) Example of PGT-A results meeting criterion 1a for a reciprocal translocation. These results demonstrate a recurring pair of segmental imbalances of chromosomes 2 and 9. (B) Example of PGT-A results meeting criterion 2a for 13;14 Robertsonian translocation. These results demonstrate 4 of 7 embryos with complete aneuploidies of acrocentric chromosomes 13 and 14. (C) Example “stair” NGS profile meeting criterion 3 for an inversion. A terminal segment of monosomy, an interstitial segment of disomy, and a terminal segment of trisomy is observed for chromosome 2, and this pattern is observed in multiple embryos. NGS = next generation sequencing; PGT-A = preimplantation genetic testing for aneuploidy.
Proposed criteria for flagging a potential chromosomal rearrangement.
| A terminal, segmental imbalance in ≥2 embryos, involving the same chromosome and the same breakpoint | 97% (n = 33) |
| Three or more embryos with complete aneuploidy of chr13 or chr14 with ≥50% of the cohort affected | 100% (n = 3) |
| Two or more embryos with characteristic inversion “stair” pattern in any cohort size | 100% (n = 2) |
Note: These criteria are proposed to be applied to the results of a preimplantation genetic testing for aneuploidy cohort to determine the likelihood of a balanced rearrangement in the egg or sperm source. If cases meet the criteria, it is recommended to perform high-resolution karyotyping, followed by FISH analysis in the case of a possible cryptic translocation. The clinical history of the reproductive couple should also be taken into consideration.