Literature DB >> 34221814

Microscope Assisted Uni-algal isolation through Dilution (MAU-D): a simple modified technique for tapping diverse cyanobacteria.

Shaloo Verma1,2, Samadhan Yuvaraj Bagul1,3, Prassan Choudhary1, Hillol Chakdar1, Sudipta Das1, Nahid Siddiqui2, Anil Kumar Saxena1.   

Abstract

Cyanobacteria are oxygenic photosynthetic microorganisms known for their agricultural and industrial importance. Unavailability of efficient and fast isolation and purification methods of cyanobacteria has impeded our understanding of cyanobacterial diversity. A number of techniques for isolation and purification of cyanobacteria are available, but most of them are cumbersome as well as time-consuming. In the present study, we modified and validated a uni-algal isolation technique named as Microscope Assisted Uni-algal isolation through Dilution (MAU-D) which used dilution of mixed algal population on slide and isolation of single type of cyanobacterial cells using light microscope. Using this technique, we obtained 81 cyanobacterial isolates belonging to various species from 19 different genera from soil and water samples collected from rice fields of Uttar Pradesh, India. This technique also resulted in isolation of six distinct genera, viz., Cyanobacterium, Toxopsis, Desertifilum, Chroococcidiopsis, Halomicronema, and Alkalinema, which were previously not reported from rice fields of India. Hence, the MAU-D technique presents a simple, comparatively fast method of isolation and purification of cyanobacteria which can help to isolate those cyanobacteria which are difficult to isolate through routine sub-culturing. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s13205-021-02890-w. © King Abdulaziz City for Science and Technology 2021.

Entities:  

Keywords:  Cyanobacteria; Diversity; Isolation; Microscopy; Purification

Year:  2021        PMID: 34221814      PMCID: PMC8211812          DOI: 10.1007/s13205-021-02890-w

Source DB:  PubMed          Journal:  3 Biotech        ISSN: 2190-5738            Impact factor:   2.893


  32 in total

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Authors:  Alexey M Kozlov; Jiajie Zhang; Pelin Yilmaz; Frank Oliver Glöckner; Alexandros Stamatakis
Journal:  Nucleic Acids Res       Date:  2016-05-10       Impact factor: 16.971

2.  Isolation and direct complete nucleotide determination of entire genes. Characterization of a gene coding for 16S ribosomal RNA.

Authors:  U Edwards; T Rogall; H Blöcker; M Emde; E C Böttger
Journal:  Nucleic Acids Res       Date:  1989-10-11       Impact factor: 16.971

3.  Conjugal transfer of DNA to cyanobacteria.

Authors:  J Elhai; C P Wolk
Journal:  Methods Enzymol       Date:  1988       Impact factor: 1.600

Review 4.  Diversity, Genomics, and Distribution of Phytoplankton-Cyanobacterium Single-Cell Symbiotic Associations.

Authors:  Rachel A Foster; Jonathan P Zehr
Journal:  Annu Rev Microbiol       Date:  2019-09-08       Impact factor: 15.500

5.  HOW MANY SPECIES OF ALGAE ARE THERE?

Authors:  Michael D Guiry
Journal:  J Phycol       Date:  2012-09-20       Impact factor: 2.923

6.  Polyphasic characterization of benthic, moderately halophilic, moderately thermophilic cyanobacteria with very thin trichomes and the proposal of Halomicronema excentricum gen. nov., sp. nov.

Authors:  Raeid M M Abed; Ferran Garcia-Pichel; Mariona Hernández-Mariné
Journal:  Arch Microbiol       Date:  2002-02-13       Impact factor: 2.552

7.  Molecular characterization and the effect of salinity on cyanobacterial diversity in the rice fields of Eastern Uttar Pradesh, India.

Authors:  Ashish Kumar Srivastava; Poonam Bhargava; Arvind Kumar; Lal Chand Rai; Brett A Neilan
Journal:  Saline Systems       Date:  2009-04-06

8.  Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies.

Authors:  Seok-Hwan Yoon; Sung-Min Ha; Soonjae Kwon; Jeongmin Lim; Yeseul Kim; Hyungseok Seo; Jongsik Chun
Journal:  Int J Syst Evol Microbiol       Date:  2017-05-30       Impact factor: 2.747

Review 9.  A Metagenomic Approach to Cyanobacterial Genomics.

Authors:  Danillo O Alvarenga; Marli F Fiore; Alessandro M Varani
Journal:  Front Microbiol       Date:  2017-05-09       Impact factor: 5.640

10.  Isolation and screening of microalgae from natural habitats in the midwestern United States of America for biomass and biodiesel sources.

Authors:  Keesoo Lee; Megan L Eisterhold; Fabio Rindi; Swaminathan Palanisami; Paul K Nam
Journal:  J Nat Sci Biol Med       Date:  2014-07
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