Literature DB >> 34221673

Multi-color structured illumination microscopy for live cell imaging based on the enhanced image recombination transform algorithm.

Tianyu Zhao1,2,3,4, Huiwen Hao5,4, Zhaojun Wang1, Yansheng Liang1, Kun Feng1, Minru He2,3, Xue Yun1, Piero R Bianco6, Yujie Sun5, Baoli Yao2,3, Ming Lei1,3.   

Abstract

Structured illumination microscopy (SIM) has attracted considerable interest in super-resolution, live-cell imaging because of its low light dose and high imaging speed. Obtaining a high-quality reconstruction image in SIM depends on the precise determination of the parameters of the fringe illumination pattern. The image recombination transform (IRT) algorithm is superior to other algorithms in obtaining the precise initial phase without any approximation, which is promising to provide a considerable solution to address the difficulty of initial phase estimation at low-modulation-depth conditions. However, the IRT algorithm only considers a phase shift of π∕2, which limits its applications in general scenarios. In this letter, we present a general form of IRT algorithm suitable for arbitrary phase shifts, providing a powerful tool for parameter estimation in low signal-to-noise cases. To demonstrate the effectiveness of the enhanced IRT algorithm, we constructed a multicolor, structured illumination microscope and studied at super-resolution, the cargo traffic in HRPE cells, and monitored the movement of mitochondrial structures and microtubules in COS-7 cells. The custom SIM system using the enhanced IRT algorithm allows multicolor capability and a low excitation intensity fluorescence imaging less than 1 W/cm2. High-quality super-resolution images are obtained, which demonstrates the utility of this approach in imaging in the life sciences.
© 2021 Optical Society of America under the terms of the OSA Open Access Publishing Agreement.

Entities:  

Year:  2021        PMID: 34221673      PMCID: PMC8221967          DOI: 10.1364/BOE.423171

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.562


  28 in total

1.  Surpassing the lateral resolution limit by a factor of two using structured illumination microscopy.

Authors:  M G Gustafsson
Journal:  J Microsc       Date:  2000-05       Impact factor: 1.758

2.  Time-lapse two-color 3D imaging of live cells with doubled resolution using structured illumination.

Authors:  Reto Fiolka; Lin Shao; E Hesper Rego; Michael W Davidson; Mats G L Gustafsson
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-19       Impact factor: 11.205

3.  Super-resolution 3D microscopy of live whole cells using structured illumination.

Authors:  Lin Shao; Peter Kner; E Hesper Rego; Mats G L Gustafsson
Journal:  Nat Methods       Date:  2011-10-16       Impact factor: 28.547

4.  ADVANCED IMAGING. Extended-resolution structured illumination imaging of endocytic and cytoskeletal dynamics.

Authors:  Dong Li; Lin Shao; Bi-Chang Chen; Xi Zhang; Mingshu Zhang; Brian Moses; Daniel E Milkie; Jordan R Beach; John A Hammer; Mithun Pasham; Tomas Kirchhausen; Michelle A Baird; Michael W Davidson; Pingyong Xu; Eric Betzig
Journal:  Science       Date:  2015-08-28       Impact factor: 47.728

5.  Non-iterative determination of pattern phase in structured illumination microscopy using auto-correlations in Fourier space.

Authors:  Kai Wicker
Journal:  Opt Express       Date:  2013-10-21       Impact factor: 3.894

Review 6.  Strategic and practical guidelines for successful structured illumination microscopy.

Authors:  Justin Demmerle; Cassandravictoria Innocent; Alison J North; Graeme Ball; Marcel Müller; Ezequiel Miron; Atsushi Matsuda; Ian M Dobbie; Yolanda Markaki; Lothar Schermelleh
Journal:  Nat Protoc       Date:  2017-04-13       Impact factor: 13.491

7.  Visualizing Intracellular Organelle and Cytoskeletal Interactions at Nanoscale Resolution on Millisecond Timescales.

Authors:  Yuting Guo; Di Li; Siwei Zhang; Yanrui Yang; Jia-Jia Liu; Xinyu Wang; Chong Liu; Daniel E Milkie; Regan P Moore; U Serdar Tulu; Daniel P Kiehart; Junjie Hu; Jennifer Lippincott-Schwartz; Eric Betzig; Dong Li
Journal:  Cell       Date:  2018-10-25       Impact factor: 41.582

8.  Composition and dynamics of human mitochondrial nucleoids.

Authors:  Nuria Garrido; Lorena Griparic; Eija Jokitalo; Jorma Wartiovaara; Alexander M van der Bliek; Johannes N Spelbrink
Journal:  Mol Biol Cell       Date:  2003-04       Impact factor: 4.138

9.  Fast, long-term, super-resolution imaging with Hessian structured illumination microscopy.

Authors:  Xiaoshuai Huang; Junchao Fan; Liuju Li; Haosen Liu; Runlong Wu; Yi Wu; Lisi Wei; Heng Mao; Amit Lal; Peng Xi; Liqiang Tang; Yunfeng Zhang; Yanmei Liu; Shan Tan; Liangyi Chen
Journal:  Nat Biotechnol       Date:  2018-04-11       Impact factor: 54.908

10.  Image recombination transform algorithm for superresolution structured illumination microscopy.

Authors:  Xing Zhou; Ming Lei; Dan Dan; Baoli Yao; Yanlong Yang; Jia Qian; Guangde Chen; Piero R Bianco
Journal:  J Biomed Opt       Date:  2016-09-01       Impact factor: 3.170

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  1 in total

Review 1.  Live-cell fluorescence spectral imaging as a data science challenge.

Authors:  Jessy Pamela Acuña-Rodriguez; Jean Paul Mena-Vega; Orlando Argüello-Miranda
Journal:  Biophys Rev       Date:  2022-03-23
  1 in total

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