| Literature DB >> 34220995 |
Ana Nilce S Maia-Elkhoury1, Daniel Magalhães Lima2, Oscar Daniel Salomón3, Lia Puppim Buzanovsky2, Martha Idalí Saboyá-Díaz4, Samantha Y O B Valadas1, Manuel J Sanchez-Vazquez2.
Abstract
OBJECTIVE: Determine and characterize potential risk areas for the occurrence of cutaneous leishmaniasis (CL) in Latin America (LA).Entities:
Keywords: Cutaneous leishmaniasis; Latin America; cluster analysis
Year: 2021 PMID: 34220995 PMCID: PMC8238258 DOI: 10.26633/RPSP.2021.83
Source DB: PubMed Journal: Rev Panam Salud Publica ISSN: 1020-4989
Description of the variables, sources and metadata included in the study
Environmental | Environmental factors | Temperature | Average monthly minimum temperature | °C | TEMPMINMED | WorldClim ( | 2010-2018 | Matrix | 2,5 arcs per minute |
Average monthly maximum temperature | °C | TEMPMAXMED | WorldClim ( | 2010-2018 | Matrix | 2,5 arcs per minute | |||
Precipitation | Average monthly precipitation | mm | PRECMED | WorldClim ( | 2010-2018 | Matrix | 2,5 arcs per minute | ||
Altitude | Average altitude | meters | ELEVMED | WorldClim ( | 2000 | Matrix | 2,5 arcs per minute | ||
Forest coverage of any type | Forest coverage | % of territory | COBFORESTA | FAO ( | 2007 | Matrix | 5 arcs per minute | ||
Vegetation type | Land coverage with evergreen or semi-deciduous forests | % of territory | COBPERENNE | ESA ( | 2009 | Matrix | 10 arcs per second | ||
Land coverage with deciduous forests | % of territory | COBCADUCIF | ESA ( | 2009 | Matrix | 10 arcs per second | |||
Land coverage with shrubs (<5 m high) | % of territory | COBARBUSTO | ESA ( | 2009 | Matrix | 10 arcs per second | |||
Socioeconomic | Factors related to work and increase of vector exposure | Mining | Mining activities | % of territory | MINERIA | USGS ( | 2011 | Vectoral | Transformed in matrix density surface of a 10km radius |
Agricultural activities | Land coverage with plantation at risk of rain | % of territory | COBPLANLLUV | ESA ( | 2009 | Matrix | 10 arcs per second | ||
Land coverage with preponderance for plantation over vegetation | % of territory | COBPLANVEG | ESA ( | 2009 | Matrix | 10 arcs per second | |||
Land coverage with preponderance for vegetation over plantation | % of territory | COBVEGPLAN | ESA ( | 2009 | Matrix | 10 arcs per second | |||
Land coverage with preponderance for forest over pastures | % of territory | COBBOSPAST | ESA ( | 2009 | Matrix | 10 arcs per second | |||
Land coverage with tropical agriculture | % of territory | COBAGRITROP | ESA ( | 2009 | Matrix | 10 arcs per second | |||
Factors related to people and housing | Illiteracy | Illiteracy rate | % of population | ANALFAB | Countries’ censuses ( | Variable | Tabular | Municipality | |
Access to water | Inadequate access to water | % of population | AGUAINAD | Countries’ censuses ( | Variable | Tabular | Municipality | ||
Sanitation | Inadequate access to sanitation | % of population | SANEINAD | Countries’ censuses ( | Variable | Tabular | Municipality | ||
Overcrowding | Overcrowding (dwellings with more than 3 people) | % of dwellings | HACINAM | Countries’ censuses ( | Variable | Tabular | Municipality |
Data compiled by a previous study using the most recent population and housing census data for each country published between 2000 and 2012 (18).
For the purposes of the study, the provinces, districts, municipalities, cantons, etc., according to the nomenclature and structure in each country, were generically called municipalities (18).
FAO, Food and Agriculture Organization of the United Nations; ESA, European Space Agency; USGS, United States Geological Survey.
elaborated by authors with results from the study and with the permission of the authors of the original study from which the data on the people and housing factors were obtained.
Environmental[a] variables with greater weight according to the V-test in each cluster
A1 | ELEVMED | 53.7 | 2899.8 | 644.6 | 657.7 | 701.8 |
COBFORESTA | -15.1 | 17.3 | 39.9 | 14.4 | 25.1 | |
TEMPMINMED | -45.2 | 7.0 | 18.0 | 3.8 | 4.1 | |
TEMPMAXMED | -46.1 | 18.6 | 28.6 | 2.7 | 3.6 | |
A2 | ELEVMED | 18.1 | 1032.6 | 644.6 | 460.5 | 701.8 |
COBPERENNE | -11.3 | 0.2 | 0.3 | 0.2 | 0.3 | |
TEMPMAXMED | -24.2 | 25.9 | 28.6 | 1.8 | 3.6 | |
TEMPMINMED | -24.2 | 15.0 | 18.0 | 1.6 | 4.1 | |
A3 | COBPERENNE | 55.5 | 0.7 | 0.3 | 0.2 | 0.3 |
COBCADUCIF | -14.4 | 0.0 | 0.0 | 0.0 | 0.1 | |
PRECMED | -20.4 | 102.8 | 131.2 | 30.9 | 56.9 | |
COBARBUSTO | -22.3 | 0.0 | 0.1 | 0.0 | 0.1 | |
A4 | COBARBUSTO | 52.4 | 0.4 | 0.1 | 0.1 | 0.1 |
PRECMED | 6.1 | 148.5 | 131.2 | 45.2 | 56.9 | |
COBPERENNE | -17.3 | 0.1 | 0.3 | 0.1 | 0.3 | |
A5 | COBCADUCIF | 54.4 | 0.3 | 0.0 | 0.1 | 0.1 |
COBARBUSTO | 11.3 | 0.2 | 0.1 | 0.1 | 0.1 | |
COBPERENNE | -8.1 | 0.2 | 0.3 | 0.1 | 0.3 | |
A6 | TEMPMAXMED | 23.8 | 30.8 | 28.6 | 1.8 | 3.6 |
TEMPMINMED | 20.1 | 20.0 | 18.0 | 2.0 | 4.1 | |
PRECMED | -14.7 | 110.3 | 131.2 | 35.5 | 56.9 | |
ELEVMED | -18.4 | 321.1 | 644.6 | 216.7 | 701.8 | |
COBPERENNE | -20.4 | 0.2 | 0.3 | 0.1 | 0.3 | |
A7 | COBFORESTA | 41.0 | 73.3 | 39.9 | 18.7 | 25.1 |
PRECMED | 37.8 | 201.1 | 131.2 | 70.5 | 56.9 | |
TEMPMINMED | 27.7 | 21.6 | 18.0 | 1.6 | 4.1 | |
TEMPMAXMED | 22.4 | 31.2 | 28.6 | 1.5 | 3.6 |
All variables presented had a p <0.001 value.
SD: standard deviation.
elaborated by authors with results from the study.
FIGURE 1.Spatial distribution of clusters formed by environmental variables in municipalities with CL transmission, approach A (left) and of environmental and socioeconomic variables in municipalities with CL transmission between 2014 and 2018 in Latin America, approach B (right)
General characteristics of the clusters, environmental and socioeconomic variables[a] with the greatest weight[b] according to the V-test in each one
Cluster | N.° of municipalities | General characteristics | Variable | V-test | Cluster mean | General mean | Cluster SC | General SD |
|---|---|---|---|---|---|---|---|---|
Andean | 333 | Inter-Andean valleys, slopes of the Andes, presence of mining and areas with inadequate access to water | ELEVMED | 54.2 | 2656.5 | 644.6 | 769.3 | 701.8 |
MINERIA | 25 | 21.2 | 5.1 | 27.6 | 12.1 | |||
TEMPMINMED | -44.8 | 8.4 | 18 | 4.3 | 4.1 | |||
TEMPMAXMED | -46.8 | 19.6 | 28.6 | 3.2 | 3.6 | |||
Forest/populated | 311 | Areas with a predominance of forests, less presence of tropical agriculture and plantations. Presence of urban areas and communities in the process of urbanization | BOSPASTO | 54.5 | 0.1 | 0 | 0.1 | 0 |
AGRITROP | -8.1 | 0.3 | 0.4 | 0.3 | 0.4 | |||
PLANTACVEG | -14.3 | 0.1 | 0.2 | 0.1 | 0.2 | |||
Forest evergreen | 1347 | Areas with evergreen forest coverage and extensive geographic continuity | COBPERENNE | 55.3 | 0.7 | 0.3 | 0.2 | 0.3 |
PLANTACLLUV | -22 | 0 | 0.1 | 0 | 0.1 | |||
VEGPLANTAC | -27.8 | 0.1 | 0.2 | 0.1 | 0.1 | |||
PLANTACVEG | -31.8 | 0.1 | 0.2 | 0.1 | 0.2 | |||
AGRITROP | -33.7 | 0.1 | 0.4 | 0.2 | 0.4 | |||
Forest/crop | 850 | Wooded areas, tropical crops and localities of medium development, and remnant patches of tropical forest | VEGPLANTAC | 32.1 | 0.3 | 0.2 | 0.2 | 0.1 |
AGRITROP | 16.3 | 0.6 | 0.4 | 0.3 | 0.4 | |||
TEMPMINMED | -14.3 | 16.2 | 18 | 2.3 | 4.1 | |||
HACINAM | -15.6 | 0 | 0.1 | 0 | 0.1 | |||
COBPERENNE | -15.7 | 0.2 | 0.3 | 0.2 | 0.3 | |||
AGUAINAD | -16.7 | 0.1 | 0.2 | 0.1 | 0.2 | |||
ANALFAB | -17.6 | 0.1 | 0.2 | 0.1 | 0.1 | |||
SANEINAD | -17.9 | 0.1 | 0.2 | 0.1 | 0.2 | |||
Savannah “cerrado“ | 505 | Shrub coverage and deciduous forests. On the margins of the Amazonian cluster, biological reserves. or in valleys at the foot of humid tropical forest Areas with poor access to water, sanitation, and education | COBARBUSTO | 41 | 0.3 | 0.1 | 0.2 | 0.1 |
COBCADUCIF | 36.6 | 0.1 | 0 | 0.2 | 0.1 | |||
COBPERENNE | -15.9 | 0.1 | 0.3 | 0.1 | 0.3 | |||
Agricultural | 1066 | Areas with tropical agricultural activities, such as cultivated areas at risk of rain, high average temperatures and low altitude, tropical crops, and a lower proportion of forest areas and pasture. | PLANTACLLUV | 26.4 | 0.2 | 0.1 | 0.2 | 0.1 |
PLANTACVEG | 23.5 | 0.3 | 0.2 | 0.2 | 0.2 | |||
TEMPMAXMED | 23.4 | 30.9 | 28.6 | 2.1 | 3.6 | |||
AGRITROP | 23.3 | 0.7 | 0.4 | 0.3 | 0.4 | |||
TEMPMINMED | 22.4 | 20.4 | 18 | 2 | 4.1 | |||
ANALFAB | 20.2 | 0.2 | 0.2 | 0.1 | 0.1 | |||
BOSPASTO | -11.9 | 0 | 0 | 0 | 0 | |||
ELEVMED | -17.3 | 315.5 | 644.6 | 267.4 | 701.8 | |||
COBPERENNE | -17.6 | 0.2 | 0.3 | 0.1 | 0.3 | |||
Amazonian | 539 | Great vegetation coverage, average temperatures and high precipitation that form the Amazonian basin and the humid tropical forest. Presents a high association with the occurrence of CL cases and an extensive and continuous geographic area with inadequate access to water and sanitation, and with illiteracy | HACINAM | 35.3 | 0.2 | 0.1 | 0.1 | 0.1 |
PRECMED | 34.2 | 210.4 | 131.2 | 76.7 | 56.9 | |||
AGUAINAD | 32.7 | 0.4 | 0.2 | 0.2 | 0.2 | |||
COBFORESTA | 32.3 | 72.9 | 39.9 | 21.2 | 25.1 | |||
SANEINAD | 30.6 | 0.4 | 0.2 | 0.2 | 0.2 | |||
TEMPMINMED | 22.6 | 21.7 | 18 | 1.7 | 4.1 | |||
ANALFAB | 20.8 | 0.2 | 0.2 | 0.1 | 0.1 | |||
TEMPMAXMED | 16.2 | 31 | 28.6 | 1.7 | 3.6 |
The analyzes of all the environmental and socioeconomic variables that had statistical significance in relation to the V-test for each cluster are detailed in the Supplementary Information.
All the variables presented had a p <0.001 value.
SD: standard deviation, CL: cutaneous leishmaniasis.
prepared by the authors with the results of the study.
FIGURE 2.Spatial distribution of CL cases in Latin America reported between 2014 and 2018 on a logarithmic base 10 scale