Literature DB >> 34214958

Tetrahedral spectral feature-Based bayesian manifold learning for grey matter morphometry: Findings from the Alzheimer's disease neuroimaging initiative.

Yonghui Fan1, Gang Wang2, Qunxi Dong1, Yuxiang Liu1, Natasha Leporé3, Yalin Wang4.   

Abstract

Structural and anatomical analyses of magnetic resonance imaging (MRI) data often require a reconstruction of the three-dimensional anatomy to a statistical shape model. Our prior work demonstrated the usefulness of tetrahedral spectral features for grey matter morphometry. However, most of the current methods provide a large number of descriptive shape features, but lack an unsupervised scheme to automatically extract a concise set of features with clear biological interpretations and that also carries strong statistical power. Here we introduce a new tetrahedral spectral feature-based Bayesian manifold learning framework for effective statistical analysis of grey matter morphology. We start by solving the technical issue of generating tetrahedral meshes which preserve the details of the grey matter geometry. We then derive explicit weak-form tetrahedral discretizations of the Hamiltonian operator (HO) and the Laplace-Beltrami operator (LBO). Next, the Schrödinger's equation is solved for constructing the scale-invariant wave kernel signature (SIWKS) as the shape descriptor. By solving the heat equation and utilizing the SIWKS, we design a morphometric Gaussian process (M-GP) regression framework and an active learning strategy to select landmarks as concrete shape descriptors. We evaluate the proposed system on publicly available data from the Alzheimers Disease Neuroimaging Initiative (ADNI), using subjects structural MRI covering the range from cognitively unimpaired (CU) to full blown Alzheimer's disease (AD). Our analyses suggest that the SIWKS and M-GP compare favorably with seven other baseline algorithms to obtain grey matter morphometry-based diagnoses. Our work may inspire more tetrahedral spectral feature-based Bayesian learning research in medical image analysis.
Copyright © 2021 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Alzheimer’S disease; Bayesian manifold learning; Magnetic resonance imaging (MRI); Spectral shape analysis; Tetrahedral mesh

Mesh:

Year:  2021        PMID: 34214958      PMCID: PMC8316398          DOI: 10.1016/j.media.2021.102123

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   13.828


  60 in total

1.  Shape recognition with spectral distances.

Authors:  Michael M Bronstein; Alexander M Bronstein
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2011-05       Impact factor: 6.226

2.  The generation of tetrahedral mesh models for neuroanatomical MRI.

Authors:  Carl Lederman; Anand Joshi; Ivo Dinov; Luminita Vese; Arthur Toga; John Darrell Van Horn
Journal:  Neuroimage       Date:  2010-11-10       Impact factor: 6.556

3.  Smooth functional and structural maps on the neocortex via orthonormal bases of the Laplace-Beltrami operator.

Authors:  Anqi Qiu; Dmitri Bitouk; Michael I Miller
Journal:  IEEE Trans Med Imaging       Date:  2006-10       Impact factor: 10.048

4.  Riemannian metric optimization on surfaces (RMOS) for intrinsic brain mapping in the Laplace-Beltrami embedding space.

Authors:  Jin Kyu Gahm; Yonggang Shi
Journal:  Med Image Anal       Date:  2018-03-16       Impact factor: 8.545

5.  Unified heat kernel regression for diffusion, kernel smoothing and wavelets on manifolds and its application to mandible growth modeling in CT images.

Authors:  Moo K Chung; Anqi Qiu; Seongho Seo; Houri K Vorperian
Journal:  Med Image Anal       Date:  2015-03-02       Impact factor: 8.545

6.  Towards a Holistic Cortical Thickness Descriptor: Heat Kernel-Based Grey Matter Morphology Signatures.

Authors:  Gang Wang; Yalin Wang
Journal:  Neuroimage       Date:  2016-12-26       Impact factor: 6.556

7.  FOCUSR: feature oriented correspondence using spectral regularization--a method for precise surface matching.

Authors:  Herve Lombaert; Leo Grady; Jonathan R Polimeni; Farida Cheriet
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2013-09       Impact factor: 6.226

8.  Gaussian predictive process models for large spatial data sets.

Authors:  Sudipto Banerjee; Alan E Gelfand; Andrew O Finley; Huiyan Sang
Journal:  J R Stat Soc Series B Stat Methodol       Date:  2008-09-01       Impact factor: 4.488

Review 9.  Ushering in the study and treatment of preclinical Alzheimer disease.

Authors:  Jessica B Langbaum; Adam S Fleisher; Kewei Chen; Napatkamon Ayutyanont; Francisco Lopera; Yakeel T Quiroz; Richard J Caselli; Pierre N Tariot; Eric M Reiman
Journal:  Nat Rev Neurol       Date:  2013-06-11       Impact factor: 42.937

Review 10.  Posterior cortical atrophy.

Authors:  Sebastian J Crutch; Manja Lehmann; Jonathan M Schott; Gil D Rabinovici; Martin N Rossor; Nick C Fox
Journal:  Lancet Neurol       Date:  2012-02       Impact factor: 44.182

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