Literature DB >> 34210972

Long noncoding RNA BS-DRL1 modulates the DNA damage response and genome stability by interacting with HMGB1 in neurons.

Min-Min Lou1,2, Xiao-Qiang Tang1,2, Guang-Ming Wang3,4,5, Jia He1,2, Fang Luo1, Ming-Feng Guan1,2, Fei Wang1,2, Huan Zou1,2, Jun-Ying Wang1,2, Qun Zhang6, Ming-Jian Xu1, Qi-Li Shi1, Li-Bing Shen1, Guo-Ming Ma1,2, Yi Wu6, Yao-Yang Zhang1, Ai-Bin Liang5, Ting-Hua Wang7, Liu-Lin Xiong7, Jian Wang8, Jun Xu9, Wen-Yuan Wang10,11,12.   

Abstract

Long noncoding RNAs (lncRNAs) are known to regulate DNA damage response (DDR) and genome stability in proliferative cells. However, it remains unknown whether lncRNAs are involved in these vital biological processes in post-mitotic neurons. Here, we report and characterize a lncRNA, termed Brain Specific DNA-damage Related lncRNA1 (BS-DRL1), in the central nervous system. BS-DRL1 is a brain-specific lncRNA and depletion of BS-DRL1 in neurons leads to impaired DDR upon etoposide treatment in vitro. Mechanistically, BS-DRL1 interacts with HMGB1, a chromatin protein that is important for genome stability, and is essential for the assembly of HMGB1 on chromatin. BS-DRL1 mediated DDR exhibits cell-type specificity in the cortex and cerebellum in gamma-irradiated mice and BS-DRL1 knockout mice show impaired motor function and concomitant purkinje cell degeneration. Our study extends the understanding of lncRNAs in DDR and genome stability and implies a protective role of lncRNA against neurodegeneration.

Entities:  

Year:  2021        PMID: 34210972     DOI: 10.1038/s41467-021-24236-z

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  42 in total

1.  Gene regulation and DNA damage in the ageing human brain.

Authors:  Tao Lu; Ying Pan; Shyan-Yuan Kao; Cheng Li; Isaac Kohane; Jennifer Chan; Bruce A Yankner
Journal:  Nature       Date:  2004-06-09       Impact factor: 49.962

2.  A BRCA1-interacting lncRNA regulates homologous recombination.

Authors:  Vivek Sharma; Simran Khurana; Nard Kubben; Kotb Abdelmohsen; Philipp Oberdoerffer; Myriam Gorospe; Tom Misteli
Journal:  EMBO Rep       Date:  2015-09-27       Impact factor: 8.807

3.  Mosaic copy number variation in human neurons.

Authors:  Michael J McConnell; Michael R Lindberg; Kristen J Brennand; Julia C Piper; Thierry Voet; Chris Cowing-Zitron; Svetlana Shumilina; Roger S Lasken; Joris R Vermeesch; Ira M Hall; Fred H Gage
Journal:  Science       Date:  2013-11-01       Impact factor: 47.728

Review 4.  lincRNAs: genomics, evolution, and mechanisms.

Authors:  Igor Ulitsky; David P Bartel
Journal:  Cell       Date:  2013-07-03       Impact factor: 41.582

5.  Topological organization of multichromosomal regions by the long intergenic noncoding RNA Firre.

Authors:  Ezgi Hacisuleyman; Loyal A Goff; Cole Trapnell; Adam Williams; Jorge Henao-Mejia; Lei Sun; Patrick McClanahan; David G Hendrickson; Martin Sauvageau; David R Kelley; Michael Morse; Jesse Engreitz; Eric S Lander; Mitch Guttman; Harvey F Lodish; Richard Flavell; Arjun Raj; John L Rinn
Journal:  Nat Struct Mol Biol       Date:  2014-01-26       Impact factor: 15.369

6.  An architectural role for a nuclear noncoding RNA: NEAT1 RNA is essential for the structure of paraspeckles.

Authors:  Christine M Clemson; John N Hutchinson; Sergio A Sara; Alexander W Ensminger; Archa H Fox; Andrew Chess; Jeanne B Lawrence
Journal:  Mol Cell       Date:  2009-02-12       Impact factor: 17.970

Review 7.  DNA damage and its links to neurodegeneration.

Authors:  Ram Madabhushi; Ling Pan; Li-Huei Tsai
Journal:  Neuron       Date:  2014-07-16       Impact factor: 17.173

8.  Noncoding RNA NORAD Regulates Genomic Stability by Sequestering PUMILIO Proteins.

Authors:  Sungyul Lee; Florian Kopp; Tsung-Cheng Chang; Anupama Sataluri; Beibei Chen; Sushama Sivakumar; Hongtao Yu; Yang Xie; Joshua T Mendell
Journal:  Cell       Date:  2015-12-24       Impact factor: 41.582

9.  High levels of mitochondrial DNA deletions in substantia nigra neurons in aging and Parkinson disease.

Authors:  Andreas Bender; Kim J Krishnan; Christopher M Morris; Geoffrey A Taylor; Amy K Reeve; Robert H Perry; Evelyn Jaros; Joshua S Hersheson; Joanne Betts; Thomas Klopstock; Robert W Taylor; Douglass M Turnbull
Journal:  Nat Genet       Date:  2006-04-09       Impact factor: 38.330

10.  Long noncoding RNA LINP1 regulates repair of DNA double-strand breaks in triple-negative breast cancer.

Authors:  Youyou Zhang; Qun He; Zhongyi Hu; Yi Feng; Lingling Fan; Zhaoqing Tang; Jiao Yuan; Weiwei Shan; Chunsheng Li; Xiaowen Hu; Janos L Tanyi; Yi Fan; Qihong Huang; Kathleen Montone; Chi V Dang; Lin Zhang
Journal:  Nat Struct Mol Biol       Date:  2016-04-25       Impact factor: 15.369

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  8 in total

Review 1.  Examples of Inverse Comorbidity between Cancer and Neurodegenerative Diseases: A Possible Role for Noncoding RNA.

Authors:  Michele Salemi; Maria Paola Mogavero; Giuseppe Lanza; Laura M Mongioì; Aldo E Calogero; Raffaele Ferri
Journal:  Cells       Date:  2022-06-15       Impact factor: 7.666

2.  HMGB1 overexpression promotes a malignant phenotype and radioresistance in ESCC.

Authors:  Jing Dong; Xueyuan Zhang; Xingyu Du; Naiyi Zou; Wenbin Shen; Ming Ma; Yaojie Wang; Shuchai Zhu
Journal:  J Cancer       Date:  2022-05-21       Impact factor: 4.478

3.  A novel imatinib-upregulated long noncoding RNA plays a critical role in inhibition of tumor growth induced by Abl oncogenes.

Authors:  Yun Ma; Guijie Guo; Tingting Li; Faxin Wen; Jianling Yang; Biao Chen; Xuefei Wang; Ji-Long Chen
Journal:  Mol Cancer       Date:  2022-01-03       Impact factor: 27.401

Review 4.  LncRNAs and CircRNAs in cancer.

Authors:  Xin Yin; Huiran Lin; Lei Lin; Lei Miao; Jing He; Zhenjian Zhuo
Journal:  MedComm (2020)       Date:  2022-05-12

Review 5.  Interactions of HMGB Proteins with the Genome and the Impact on Disease.

Authors:  Calvin K Voong; James A Goodrich; Jennifer F Kugel
Journal:  Biomolecules       Date:  2021-10-02

Review 6.  Home and Away: The Role of Non-Coding RNA in Intracellular and Intercellular DNA Damage Response.

Authors:  Annabelle Shaw; Monika Gullerova
Journal:  Genes (Basel)       Date:  2021-09-23       Impact factor: 4.096

Review 7.  Host Non-Coding RNA Regulates Influenza A Virus Replication.

Authors:  Yuejiao Liao; Shouqing Guo; Geng Liu; Zhenyu Qiu; Jiamin Wang; Di Yang; Xiaojing Tian; Ziling Qiao; Zhongren Ma; Zhenbin Liu
Journal:  Viruses       Date:  2021-12-29       Impact factor: 5.048

8.  The lncRNA SEMA3B-AS1/HMGB1/FBXW7 Axis Mediates the Peritoneal Metastasis of Gastric Cancer by Regulating BGN Protein Ubiquitination.

Authors:  Guoquan Huang; Zhenxian Xiang; Haitao Wu; Qiuming He; Rongzhang Dou; Chaogang Yang; Jialin Song; Sihao Huang; Shuyi Wang; Bin Xiong
Journal:  Oxid Med Cell Longev       Date:  2022-02-27       Impact factor: 6.543

  8 in total

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