Literature DB >> 34201012

Stability of Radiomic Features across Different Region of Interest Sizes-A CT and MR Phantom Study.

Laura J Jensen1, Damon Kim1, Thomas Elgeti1, Ingo G Steffen1, Bernd Hamm1, Sebastian N Nagel1.   

Abstract

We aimed to evaluate radiomic features' stability across different region of interest (ROI) sizes in CT and MR images. We chose a phantom with a homogenous internal structure so no differences for a feature extracted from ROIs of different sizes would be expected. For this, we scanned a plastic cup filled with sodium chloride solution ten times in CT and per MR sequence (T1-weighted-gradient-echo and T2-weighted-turbo-inversion-recovery-magnitude). We placed sphere-shaped ROIs of different diameters (4, 8, and 16 mm, and 4, 8, and 16 pixels) into the phantom's center. Features were extracted using PyRadiomics. We assessed feature stability across ROI sizes with overall concordance correlation coefficients (OCCCs). Differences were tested for significance with the Mann-Whitney U-test. Of 93 features, 87 T1w-derived, 87 TIRM-derived, and 70 CT-derived features were significantly different between ROI sizes. Among MR-derived features, OCCCs showed excellent (>0.90) agreement for mean, median, and root mean squared for ROI sizes between 4 and 16 mm and pixels. We further observed excellent agreement for 10th and 90th percentile in T1w and 10th percentile in T2w TIRM images. There was no excellent agreement among the OCCCs of CT-derived features. In summary, many features indicated significant differences and only few showed excellent agreement across varying ROI sizes, although we examined a homogenous phantom. Since we considered a small phantom in an experimental setting, further studies to investigate this size effect would be necessary for a generalization. Nevertheless, we believe knowledge about this effect is crucial in interpreting radiomics studies, as features that supposedly discriminate disease entities may only indicate a systematic difference in ROI size.

Entities:  

Keywords:  computed tomography; magnetic resonance imaging; phantom; radiomics; reproducibility; robustness; texture analysis

Year:  2021        PMID: 34201012     DOI: 10.3390/tomography7020022

Source DB:  PubMed          Journal:  Tomography        ISSN: 2379-1381


  7 in total

1.  CT Texture Analysis of Pulmonary Neuroendocrine Tumors-Associations with Tumor Grading and Proliferation.

Authors:  Hans-Jonas Meyer; Jakob Leonhardi; Anne Kathrin Höhn; Johanna Pappisch; Hubert Wirtz; Timm Denecke; Armin Frille
Journal:  J Clin Med       Date:  2021-11-26       Impact factor: 4.241

2.  Brain MRI Radiomics Analysis of School-Aged Children with Tetralogy of Fallot.

Authors:  Yiwei Pu; Songmei Li; Siyu Ma; Yuanli Hu; Qinghui Hu; Yuting Liu; Mengting Wu; Jia An; Ming Yang; Xuming Mo
Journal:  Comput Math Methods Med       Date:  2021-10-29       Impact factor: 2.238

3.  Identification of CT Imaging Phenotypes of Colorectal Liver Metastases from Radiomics Signatures-Towards Assessment of Interlesional Tumor Heterogeneity.

Authors:  Hishan Tharmaseelan; Alexander Hertel; Fabian Tollens; Johann Rink; Piotr Woźnicki; Verena Haselmann; Isabelle Ayx; Dominik Nörenberg; Stefan O Schoenberg; Matthias F Froelich
Journal:  Cancers (Basel)       Date:  2022-03-24       Impact factor: 6.639

4.  Machine Learning Model Based on Radiomic Features for Differentiation between COVID-19 and Pneumonia on Chest X-ray.

Authors:  Young Jae Kim
Journal:  Sensors (Basel)       Date:  2022-09-05       Impact factor: 3.847

Review 5.  The Potential and Emerging Role of Quantitative Imaging Biomarkers for Cancer Characterization.

Authors:  Hishan Tharmaseelan; Alexander Hertel; Shereen Rennebaum; Dominik Nörenberg; Verena Haselmann; Stefan O Schoenberg; Matthias F Froelich
Journal:  Cancers (Basel)       Date:  2022-07-09       Impact factor: 6.575

6.  Enhancing the stability of CT radiomics across different volume of interest sizes using parametric feature maps: a phantom study.

Authors:  Laura J Jensen; Damon Kim; Thomas Elgeti; Ingo G Steffen; Lars-Arne Schaafs; Bernd Hamm; Sebastian N Nagel
Journal:  Eur Radiol Exp       Date:  2022-09-15

7.  Stability of Liver Radiomics across Different 3D ROI Sizes-An MRI In Vivo Study.

Authors:  Laura J Jensen; Damon Kim; Thomas Elgeti; Ingo G Steffen; Bernd Hamm; Sebastian N Nagel
Journal:  Tomography       Date:  2021-12-03
  7 in total

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