Exposure to fomesafen alters the gut microbiota and the physiology of the earthworm Pheretima guillelmi.

The application of herbicide fomesafen plays a crucial role in ensuring global soybean productivity in modern agriculture, but it results in both adverse effects on soil ecosystems and phytotoxicity to succeeding crops. Soil pollution due to herbicides has raised much concern worldwide. However, there has been little investigations concerning their effects on soil fauna, especially on the gut microbial communities of earthworms. In this study, the soil endogeic earthworm Pheretima guillelmi was incubated for 20 days in natural and fomesafen-polluted soils to investigate the effects of the herbicide on gut bacterial microbiota and the earthworm's physiological indices, including energy resource (protein) and antioxidant enzyme (superoxide dismutase, SOD) of earthworms in the soil ecosystem. A significantly different and smaller microbial community was presented in the earthworm's gut compared with the cast and the surrounding soil, with exposure to fomesafen further reducing the bacterial diversity and altering the gut community composition. This was observed as significant changes in the relative abundance of the phyla Actinobacteria, Firmicutes, and Proteobacteria as well as the genera Bacillus, Microvirga, Blastococcus, Nocardioides, and Gaiella. Moreover, exposure to fomesafen reduced earthworms' energy resources and activated the antioxidant system, with both effects being significantly correlated with the gut microbial diversity. These findings unravel the fact that exposure to the herbicide fomesafen may affect non-target soil fauna via changes in their microbiota and physiological indices, thereby contributing new knowledge regarding the adverse impacts of fomesafen on the terrestrial ecosystem.