Literature DB >> 34183831

Real-time multi-angle projection imaging of biological dynamics.

Bo-Jui Chang1, James D Manton2, Etai Sapoznik1, Theresa Pohlkamp3, Tamara S Terrones3, Erik S Welf1,4, Vasanth S Murali1,4, Philippe Roudot4, Kayley Hake5, Lachlan Whitehead6,7, Andrew G York5, Kevin M Dean1,4, Reto Fiolka8,9.   

Abstract

We introduce a cost-effective and easily implementable scan unit that converts any camera-based microscope with optical sectioning capability into a multi-angle projection imaging system. Projection imaging reduces data overhead and accelerates imaging by a factor of >100, while also allowing users to readily view biological phenomena of interest from multiple perspectives on the fly. By rapidly interrogating the sample from just two perspectives, our method also enables real-time stereoscopic imaging and three-dimensional particle localization. We demonstrate projection imaging with spinning disk confocal, lattice light-sheet, multidirectional illumination light-sheet and oblique plane microscopes on specimens that range from organelles in single cells to the vasculature of a zebrafish embryo. Furthermore, we leverage our projection method to rapidly image cancer cell morphodynamics and calcium signaling in cultured neurons at rates up to 119 Hz as well as to simultaneously image orthogonal views of a beating embryonic zebrafish heart.

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Year:  2021        PMID: 34183831      PMCID: PMC9206531          DOI: 10.1038/s41592-021-01175-7

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   47.990


  31 in total

1.  Parallelized STED fluorescence nanoscopy.

Authors:  Pit Bingen; Matthias Reuss; Johann Engelhardt; Stefan W Hell
Journal:  Opt Express       Date:  2011-11-21       Impact factor: 3.894

2.  Integrated one- and two-photon scanned oblique plane illumination (SOPi) microscopy for rapid volumetric imaging.

Authors:  Manish Kumar; Sandeep Kishore; Jordan Nasenbeny; David L McLean; Yevgenia Kozorovitskiy
Journal:  Opt Express       Date:  2018-05-14       Impact factor: 3.894

3.  Fiji: an open-source platform for biological-image analysis.

Authors:  Johannes Schindelin; Ignacio Arganda-Carreras; Erwin Frise; Verena Kaynig; Mark Longair; Tobias Pietzsch; Stephan Preibisch; Curtis Rueden; Stephan Saalfeld; Benjamin Schmid; Jean-Yves Tinevez; Daniel James White; Volker Hartenstein; Kevin Eliceiri; Pavel Tomancak; Albert Cardona
Journal:  Nat Methods       Date:  2012-06-28       Impact factor: 28.547

4.  Calcium imaging of neural circuits with extended depth-of-field light-sheet microscopy.

Authors:  Sean Quirin; Nikita Vladimirov; Chao-Tsung Yang; Darcy S Peterka; Rafael Yuste; Misha B Ahrens
Journal:  Opt Lett       Date:  2016-03-01       Impact factor: 3.776

5.  SPED Light Sheet Microscopy: Fast Mapping of Biological System Structure and Function.

Authors:  Raju Tomer; Matthew Lovett-Barron; Isaac Kauvar; Aaron Andalman; Vanessa M Burns; Sethuraman Sankaran; Logan Grosenick; Michael Broxton; Samuel Yang; Karl Deisseroth
Journal:  Cell       Date:  2015-12-17       Impact factor: 41.582

6.  Mesoscopic in vivo 3-D tracking of sparse cell populations using angular multiplexed optical projection tomography.

Authors:  Lingling Chen; Yuriy Alexandrov; Sunil Kumar; Natalie Andrews; Margaret J Dallman; Paul M W French; James McGinty
Journal:  Biomed Opt Express       Date:  2015-03-12       Impact factor: 3.732

7.  Optical projection tomography as a tool for 3D microscopy and gene expression studies.

Authors:  James Sharpe; Ulf Ahlgren; Paul Perry; Bill Hill; Allyson Ross; Jacob Hecksher-Sørensen; Richard Baldock; Duncan Davidson
Journal:  Science       Date:  2002-04-19       Impact factor: 47.728

8.  Lattice light-sheet microscopy: imaging molecules to embryos at high spatiotemporal resolution.

Authors:  Bi-Chang Chen; Wesley R Legant; Kai Wang; Lin Shao; Daniel E Milkie; Michael W Davidson; Chris Janetopoulos; Xufeng S Wu; John A Hammer; Zhe Liu; Brian P English; Yuko Mimori-Kiyosue; Daniel P Romero; Alex T Ritter; Jennifer Lippincott-Schwartz; Lillian Fritz-Laylin; R Dyche Mullins; Diana M Mitchell; Joshua N Bembenek; Anne-Cecile Reymann; Ralph Böhme; Stephan W Grill; Jennifer T Wang; Geraldine Seydoux; U Serdar Tulu; Daniel P Kiehart; Eric Betzig
Journal:  Science       Date:  2014-10-23       Impact factor: 47.728

9.  MYC promotes tryptophan uptake and metabolism by the kynurenine pathway in colon cancer.

Authors:  Niranjan Venkateswaran; M Carmen Lafita-Navarro; Yi-Heng Hao; Jessica A Kilgore; Lizbeth Perez-Castro; Jonathan Braverman; Nofit Borenstein-Auerbach; Min Kim; Nicholas P Lesner; Prashant Mishra; Thomas Brabletz; Jerry W Shay; Ralph J DeBerardinis; Noelle S Williams; Omer H Yilmaz; Maralice Conacci-Sorrell
Journal:  Genes Dev       Date:  2019-08-15       Impact factor: 11.361

10.  Bleach correction ImageJ plugin for compensating the photobleaching of time-lapse sequences.

Authors:  Kota Miura
Journal:  F1000Res       Date:  2020-12-21
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  2 in total

1.  High-throughput widefield fluorescence imaging of 3D samples using deep learning for 2D projection image restoration.

Authors:  Edvin Forsgren; Christoffer Edlund; Miniver Oliver; Kalpana Barnes; Rickard Sjögren; Timothy R Jackson
Journal:  PLoS One       Date:  2022-05-19       Impact factor: 3.240

2.  Background inhibited and speed-loss-free volumetric imaging in vivo based on structured-illumination Fourier light field microscopy.

Authors:  Jiazhen Zhai; Ruheng Shi; Kuikui Fan; Lingjie Kong
Journal:  Front Neurosci       Date:  2022-09-29       Impact factor: 5.152

  2 in total

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