Literature DB >> 34180026

Changes in soil ammonia oxidizers and potential nitrification after clear-cutting of boreal forests in China.

Dandan Qi1, Fujuan Feng2, Yanmei Fu1, Xue Sun1.   

Abstract

The Korean pine and broad-leaved mixed forests are the most typical and complete ecosystem among the global boreal forests, with extremely important ecological functions. However, few studies on the changes of soil ammonia oxidizers and potential nitrification after clear-cutting of forests are reported. In this study, in contrast to primary Korean pine forests, nitrate (NO3-) was significantly higher in secondary broad-leaved forests, while ammonium (NH4+) was on the contrary. The abundance of ammonia-oxidizing bacteria (AOB) was greatly higher in secondary broad-leaved forests, while levels of ammonia-oxidizing archaea (AOA) were not significantly different between them. The significant differences of community structure of AOA and AOB were observed in different forest types and soil layers. Compared with AOA, community compositions of AOB was more sensitive to forest type. The dominant groups of AOA were Nitrososphaera and Nitrosotalea, and the dominant group of AOB was Nitrosospira, of which Nitrosospira cluster 2 and 4 were functional groups with highly activity. Soil potential nitrification rate (PNR) was higher in secondary broad-leaved forests. Furthermore, PNR and AOB abundance had a significant positive correlation, but no significant correlation with AOA abundance. These results provide insights into the soil nitrogen balance and effects on forest restoration after clear-cutting.

Entities:  

Keywords:  Ammonia-oxidizing archaea; Ammonia-oxidizing bacteria; Clear-cutting; Pinus koraiensis; Potential nitrification rate

Year:  2021        PMID: 34180026     DOI: 10.1007/s11274-021-03087-2

Source DB:  PubMed          Journal:  World J Microbiol Biotechnol        ISSN: 0959-3993            Impact factor:   3.312


  29 in total

1.  Niche specialization of terrestrial archaeal ammonia oxidizers.

Authors:  Cécile Gubry-Rangin; Brigitte Hai; Christopher Quince; Marion Engel; Bruce C Thomson; Phillip James; Michael Schloter; Robert I Griffiths; James I Prosser; Graeme W Nicol
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-08       Impact factor: 11.205

2.  Genomic analysis of the uncultivated marine crenarchaeote Cenarchaeum symbiosum.

Authors:  Steven J Hallam; Konstantinos T Konstantinidis; Nik Putnam; Christa Schleper; Yoh-ichi Watanabe; Junichi Sugahara; Christina Preston; José de la Torre; Paul M Richardson; Edward F DeLong
Journal:  Proc Natl Acad Sci U S A       Date:  2006-11-17       Impact factor: 11.205

3.  Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean.

Authors:  Christopher A Francis; Kathryn J Roberts; J Michael Beman; Alyson E Santoro; Brian B Oakley
Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-26       Impact factor: 11.205

4.  Activity, diversity and population size of ammonia-oxidising bacteria in oil-contaminated landfarming soil.

Authors:  Jukka Kurola; Mirja Salkinoja-Salonen; Tuula Aarnio; Jenni Hultman; Martin Romantschuk
Journal:  FEMS Microbiol Lett       Date:  2005-09-01       Impact factor: 2.742

5.  Ammonia-oxidizing archaea use the most energy-efficient aerobic pathway for CO2 fixation.

Authors:  Martin Könneke; Daniel M Schubert; Philip C Brown; Michael Hügler; Sonja Standfest; Thomas Schwander; Lennart Schada von Borzyskowski; Tobias J Erb; David A Stahl; Ivan A Berg
Journal:  Proc Natl Acad Sci U S A       Date:  2014-05-19       Impact factor: 11.205

Review 6.  The microbial nitrogen-cycling network.

Authors:  Marcel M M Kuypers; Hannah K Marchant; Boran Kartal
Journal:  Nat Rev Microbiol       Date:  2018-02-05       Impact factor: 60.633

7.  The phylogeny of autotrophic ammonia-oxidizing bacteria as determined by analysis of 16S ribosomal RNA gene sequences.

Authors:  I M Head; W D Hiorns; T M Embley; A J McCarthy; J R Saunders
Journal:  J Gen Microbiol       Date:  1993-06

Review 8.  Mesophilic Crenarchaeota: proposal for a third archaeal phylum, the Thaumarchaeota.

Authors:  Céline Brochier-Armanet; Bastien Boussau; Simonetta Gribaldo; Patrick Forterre
Journal:  Nat Rev Microbiol       Date:  2008-03       Impact factor: 60.633

9.  Unifying the global phylogeny and environmental distribution of ammonia-oxidising archaea based on amoA genes.

Authors:  Ricardo J Eloy Alves; Bui Quang Minh; Tim Urich; Arndt von Haeseler; Christa Schleper
Journal:  Nat Commun       Date:  2018-04-17       Impact factor: 14.919

10.  Consequences of microbial diversity in forest nitrogen cycling: diverse ammonifiers and specialized ammonia oxidizers.

Authors:  Kazuo Isobe; Yuta Ise; Hiroyu Kato; Tomoki Oda; Christian E Vincenot; Keisuke Koba; Ryunosuke Tateno; Keishi Senoo; Nobuhito Ohte
Journal:  ISME J       Date:  2019-09-03       Impact factor: 10.302

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