Literature DB >> 34167485

Archiving time series sewage samples as biological records of built environments.

David S Thaler1,2,3, Thomas P Sakmar4.   

Abstract

This commentary encourages the regular archiving of nucleic-acid-stabilized serial samples of wastewaters and/or sewage. Stabilized samples would facilitate retrospective reconstitution of built environments' biological fluids. Biological time capsules would allow retrospective searches for nucleic acids from viruses such as SARS-CoV-2. Current resources for testing need not be diverted if samples are saved in case they become important in the future. Systematic storage would facilitate investigation into the origin and prevalence of viruses and other agents. Comparison of prevalence data from individual and clinical samplings with community wastewater would allow valuable comparison, contrast and correlation among different testing modalities. Current interest is focused on SARS-CoV-2, but archived samples could become valuable in many contexts including surveys for other infectious and chemical agents whose identity is not currently known. Archived time series of wastewater will take their place alongside other biological repositories and records including those from medical facilities, museums, eDNA, living cell and tissue collections. Together these will prove invaluable records of the evolving Anthropocene.

Entities:  

Keywords:  Biological diaries; Covid-19; Historical epidemiology; Public health; SARS-CoV-2; Sample archiving; Sewage; Virus; Wastewater

Year:  2021        PMID: 34167485     DOI: 10.1186/s12879-021-06268-4

Source DB:  PubMed          Journal:  BMC Infect Dis        ISSN: 1471-2334            Impact factor:   3.090


  29 in total

1.  Predominant role of bacterial pneumonia as a cause of death in pandemic influenza: implications for pandemic influenza preparedness.

Authors:  David M Morens; Jeffery K Taubenberger; Anthony S Fauci
Journal:  J Infect Dis       Date:  2008-10-01       Impact factor: 5.226

2.  How sewage could reveal true scale of coronavirus outbreak.

Authors:  Smriti Mallapaty
Journal:  Nature       Date:  2020-04       Impact factor: 49.962

3.  Development of Microbiome Biobanks - Challenges and Opportunities.

Authors:  M J Ryan; M Schloter; G Berg; T Kostic; L L Kinkel; K Eversole; J A Macklin; B Schelkle; M Kazou; I Sarand; B K Singh; D Fischer; E Maguin; I Ferrocino; N Lima; R S McClure; T C Charles; R S C de Souza; G S Kiran; H L Krug; J Taffner; H Roume; J Selvin; D Smith; D Rybakova; A Sessitsch
Journal:  Trends Microbiol       Date:  2020-08-13       Impact factor: 17.079

4.  Biohistorical materials and contemporary privacy concerns-the forensic case of King Albert I.

Authors:  Maarten H D Larmuseau; Bram Bekaert; Maarten Baumers; Tom Wenseleers; Dieter Deforce; Pascal Borry; Ronny Decorte
Journal:  Forensic Sci Int Genet       Date:  2016-07-22       Impact factor: 4.882

5.  Direct evidence of extensive diversity of HIV-1 in Kinshasa by 1960.

Authors:  Michael Worobey; Marlea Gemmel; Dirk E Teuwen; Tamara Haselkorn; Kevin Kunstman; Michael Bunce; Jean-Jacques Muyembe; Jean-Marie M Kabongo; Raphaël M Kalengayi; Eric Van Marck; M Thomas P Gilbert; Steven M Wolinsky
Journal:  Nature       Date:  2008-10-02       Impact factor: 49.962

6.  The next generation of natural history collections.

Authors:  David E Schindel; Joseph A Cook
Journal:  PLoS Biol       Date:  2018-07-16       Impact factor: 8.029

7.  Early SARS-CoV-2 outbreak detection by sewage-based epidemiology.

Authors:  Gorka Orive; Unax Lertxundi; Damia Barcelo
Journal:  Sci Total Environ       Date:  2020-05-08       Impact factor: 7.963

8.  CoproID predicts the source of coprolites and paleofeces using microbiome composition and host DNA content.

Authors:  Maxime Borry; Bryan Cordova; Angela Perri; Marsha Wibowo; Tanvi Prasad Honap; Jada Ko; Jie Yu; Kate Britton; Linus Girdland-Flink; Robert C Power; Ingelise Stuijts; Domingo C Salazar-García; Courtney Hofman; Richard Hagan; Thérèse Samdapawindé Kagoné; Nicolas Meda; Helene Carabin; David Jacobson; Karl Reinhard; Cecil Lewis; Aleksandar Kostic; Choongwon Jeong; Alexander Herbig; Alexander Hübner; Christina Warinner
Journal:  PeerJ       Date:  2020-04-17       Impact factor: 2.984

9.  An environmental and health perspective for COVID-19 outbreak: Meteorology and air quality influence, sewage epidemiology indicator, hospitals disinfection, drug therapies and recommendations.

Authors:  Damia Barcelo
Journal:  J Environ Chem Eng       Date:  2020-05-05
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