Literature DB >> 32800611

Development of Microbiome Biobanks - Challenges and Opportunities.

M J Ryan1, M Schloter2, G Berg3, T Kostic4, L L Kinkel5, K Eversole6, J A Macklin7, B Schelkle8, M Kazou9, I Sarand10, B K Singh11, D Fischer2, E Maguin12, I Ferrocino13, N Lima14, R S McClure15, T C Charles16, R S C de Souza17, G S Kiran18, H L Krug3, J Taffner3, H Roume12, J Selvin19, D Smith20, D Rybakova3, A Sessitsch4.   

Abstract

The microbiome research field is rapidly evolving, but the required biobanking infrastructure is currently fragmented and not prepared for the biobanking of microbiomes. The rapid advancement of technologies requires an urgent assessment of how biobanks can underpin research by preserving microbiome samples and their functional potential.
Copyright © 2020 Elsevier Ltd. All rights reserved.

Keywords:  biobanks; cryopreservation; metagenomics; microbiome

Year:  2020        PMID: 32800611     DOI: 10.1016/j.tim.2020.06.009

Source DB:  PubMed          Journal:  Trends Microbiol        ISSN: 0966-842X            Impact factor:   17.079


  12 in total

Review 1.  Soil microbiomes and one health.

Authors:  Samiran Banerjee; Marcel G A van der Heijden
Journal:  Nat Rev Microbiol       Date:  2022-08-23       Impact factor: 78.297

2.  Age-specific microbiota in altering host inflammatory and metabolic signaling as well as metabolome based on the sex.

Authors:  Lili Sheng; Prasant Kumar Jena; Ying Hu; Yu-Jui Yvonne Wan
Journal:  Hepatobiliary Surg Nutr       Date:  2021-01       Impact factor: 7.293

3.  Towards a unified data infrastructure to support European and global microbiome research: a call to action.

Authors:  Matthew J Ryan; Michael Schloter; Gabriele Berg; Linda L Kinkel; Kellye Eversole; James A Macklin; Daria Rybakova; Angela Sessitsch
Journal:  Environ Microbiol       Date:  2020-12-03       Impact factor: 5.491

Review 4.  Microbiota medicine: towards clinical revolution.

Authors:  Prisca Gebrayel; Carole Nicco; Souhaila Al Khodor; Jaroslaw Bilinski; Elisabetta Caselli; Elena M Comelli; Markus Egert; Cristina Giaroni; Tomasz M Karpinski; Igor Loniewski; Agata Mulak; Julie Reygner; Paulina Samczuk; Matteo Serino; Mariusz Sikora; Annalisa Terranegra; Marcin Ufnal; Romain Villeger; Chantal Pichon; Peter Konturek; Marvin Edeas
Journal:  J Transl Med       Date:  2022-03-07       Impact factor: 5.531

Review 5.  Microbial Community and Function-Based Synthetic Bioinoculants: A Perspective for Sustainable Agriculture.

Authors:  Archna Suman; Venkadasamy Govindasamy; Balasubramanian Ramakrishnan; K Aswini; J SaiPrasad; Pushpendra Sharma; Devashish Pathak; Kannepalli Annapurna
Journal:  Front Microbiol       Date:  2022-03-11       Impact factor: 5.640

6.  The Pre-Analytical CEN/TS Standard for Microbiome Diagnostics-How Can Research and Development Benefit?

Authors:  Conny Stumptner; Vanessa Stadlbauer; Dominic O'Neil; André Gessner; Andreas Hiergeist; Kurt Zatloukal; Peter M Abuja
Journal:  Nutrients       Date:  2022-05-09       Impact factor: 5.717

7.  Expanding natural transformation to improve beneficial lactic acid bacteria.

Authors:  Stefano Di Giacomo; Frédéric Toussaint; Laura Ledesma-García; Adrien Knoops; Florence Vande Capelle; Christophe Fremaux; Philippe Horvath; Jean-Marc Ladrière; Hassina Ait-Abderrahim; Pascal Hols; Johann Mignolet
Journal:  FEMS Microbiol Rev       Date:  2022-07-20       Impact factor: 15.177

Review 8.  Archiving time series sewage samples as biological records of built environments.

Authors:  David S Thaler; Thomas P Sakmar
Journal:  BMC Infect Dis       Date:  2021-06-24       Impact factor: 3.090

Review 9.  Gut Microbiota and Diarrhea: An Updated Review.

Authors:  Yunxia Li; Siting Xia; Xiaohan Jiang; Can Feng; Saiming Gong; Jie Ma; Zhengfeng Fang; Jie Yin; Yulong Yin
Journal:  Front Cell Infect Microbiol       Date:  2021-04-15       Impact factor: 5.293

Review 10.  The microbiota-gut-brain axis: pathways to better brain health. Perspectives on what we know, what we need to investigate and how to put knowledge into practice.

Authors:  Anirikh Chakrabarti; Lucie Geurts; Lesley Hoyles; Patricia Iozzo; Aletta D Kraneveld; Giorgio La Fata; Michela Miani; Elaine Patterson; Bruno Pot; Colette Shortt; David Vauzour
Journal:  Cell Mol Life Sci       Date:  2022-01-19       Impact factor: 9.261

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