Literature DB >> 34162989

Integrated network analysis identifying potential novel drug candidates and targets for Parkinson's disease.

Pusheng Quan1, Kai Wang2, Shi Yan1, Shirong Wen1, Chengqun Wei3, Xinyu Zhang1, Jingwei Cao1, Lifen Yao4.   

Abstract

This study aimed to identify potential novel drug candidates and targets for Parkinson's disease. First, 970 genes that have been reported to be related to PD were collected from five databases, and functional enrichment analysis of these genes was conducted to investigate their potential mechanisms. Then, we collected drugs and related targets from DrugBank, narrowed the list by proximity scores and Inverted Gene Set Enrichment analysis of drug targets, and identified potential drug candidates for PD treatment. Finally, we compared the expression distribution of the candidate drug-target genes between the PD group and the control group in the public dataset with the largest sample size (GSE99039) in Gene Expression Omnibus. Ten drugs with an FDR < 0.1 and their corresponding targets were identified. Some target genes of the ten drugs significantly overlapped with PD-related genes or already known therapeutic targets for PD. Nine differentially expressed drug-target genes with p < 0.05 were screened. This work will facilitate further research into the possible efficacy of new drugs for PD and will provide valuable clues for drug design.

Entities:  

Year:  2021        PMID: 34162989     DOI: 10.1038/s41598-021-92701-2

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  44 in total

Review 1.  Trends in the exploitation of novel drug targets.

Authors:  Mathias Rask-Andersen; Markus Sällman Almén; Helgi B Schiöth
Journal:  Nat Rev Drug Discov       Date:  2011-08-01       Impact factor: 84.694

Review 2.  Parkinson's disease.

Authors:  Lorraine V Kalia; Anthony E Lang
Journal:  Lancet       Date:  2015-04-19       Impact factor: 79.321

3.  A bidirectional drug repositioning approach for Parkinson's disease through network-based inference.

Authors:  Hindol Rakshit; Paulami Chatterjee; Debjani Roy
Journal:  Biochem Biophys Res Commun       Date:  2015-01-07       Impact factor: 3.575

Review 4.  Repurposing drugs as inhaled therapies in asthma.

Authors:  Sandra D Anderson
Journal:  Adv Drug Deliv Rev       Date:  2018-06-12       Impact factor: 15.470

Review 5.  Diagnosis and Treatment of Parkinson Disease: A Review.

Authors:  Melissa J Armstrong; Michael S Okun
Journal:  JAMA       Date:  2020-02-11       Impact factor: 56.272

Review 6.  Parkinson's disease.

Authors:  Bastiaan R Bloem; Michael S Okun; Christine Klein
Journal:  Lancet       Date:  2021-04-10       Impact factor: 79.321

Review 7.  Parkinson's Disease Drug Development Since 1999: A Story of Repurposing and Relative Success.

Authors:  Deirdre M Boucherie; Gonçalo S Duarte; Tiago Machado; Patrícia R Faustino; Cristina Sampaio; Olivier Rascol; Joaquim J Ferreira
Journal:  J Parkinsons Dis       Date:  2021       Impact factor: 5.568

Review 8.  Technology of deep brain stimulation: current status and future directions.

Authors:  Joachim K Krauss; Nir Lipsman; Tipu Aziz; Alexandre Boutet; Peter Brown; Jin Woo Chang; Benjamin Davidson; Warren M Grill; Marwan I Hariz; Andreas Horn; Michael Schulder; Antonios Mammis; Peter A Tass; Jens Volkmann; Andres M Lozano
Journal:  Nat Rev Neurol       Date:  2020-11-26       Impact factor: 42.937

Review 9.  Recent advances in drug repositioning for the discovery of new anticancer drugs.

Authors:  Joong Sup Shim; Jun O Liu
Journal:  Int J Biol Sci       Date:  2014-06-10       Impact factor: 6.580

10.  Potential Therapeutic Drugs for Parkinson's Disease Based on Data Mining and Bioinformatics Analysis.

Authors:  Chuan Xu; Jiajun Chen; Xia Xu; Yingyu Zhang; Jia Li
Journal:  Parkinsons Dis       Date:  2018-10-02
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  2 in total

Review 1.  Construction and contextualization approaches for protein-protein interaction networks.

Authors:  Apurva Badkas; Sébastien De Landtsheer; Thomas Sauter
Journal:  Comput Struct Biotechnol J       Date:  2022-06-18       Impact factor: 6.155

2.  Comprehensive Network Analysis Reveals the Targets and Potential Multitarget Drugs of Type 2 Diabetes Mellitus.

Authors:  Wan Zhou; Qiang Liu; Wei Wang; Xiao-Jing Yuan; Chun-Chun Xiao; Shan-Dong Ye
Journal:  Oxid Med Cell Longev       Date:  2022-07-28       Impact factor: 7.310

  2 in total

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