Literature DB >> 25576361

A bidirectional drug repositioning approach for Parkinson's disease through network-based inference.

Hindol Rakshit1, Paulami Chatterjee2, Debjani Roy3.   

Abstract

Parkinson's Disease (PD) is one of the most prevailing neurodegenerative disorders. Novel computational approaches are required to find new ways of using the existing drugs or drug repositioning, as currently there exists no cure for PD. We proposed a new bidirectional drug repositioning method that consists of Top-down and Bottom-up approaches and finally gives information about significant repositioning drug candidates. This method takes into account of the topological significance of drugs in the tripartite Indication-drug-target network (IDTN) as well the significance of their targets in the PD-specific protein-protein interaction network (PPIN). 9 non-Parkinsonian drugs have been proposed as the significant repositioning candidates for PD. In order to find out the efficiency of the repositioning candidates we introduced a parameter called the On-target ratio (OTR). The average OTR value of final repositioning candidates has been found to be higher than that of known PD specific drugs.
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Drug repositioning; Indication-drug-target network; Parkinson's disease; Protein–protein interaction network; Topological significance

Mesh:

Substances:

Year:  2015        PMID: 25576361     DOI: 10.1016/j.bbrc.2014.12.101

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  4 in total

Review 1.  A review of computational drug repositioning: strategies, approaches, opportunities, challenges, and directions.

Authors:  Tamer N Jarada; Jon G Rokne; Reda Alhajj
Journal:  J Cheminform       Date:  2020-07-22       Impact factor: 5.514

2.  Network controllability solutions for computational drug repurposing using genetic algorithms.

Authors:  Victor-Bogdan Popescu; Krishna Kanhaiya; Dumitru Iulian Năstac; Eugen Czeizler; Ion Petre
Journal:  Sci Rep       Date:  2022-01-26       Impact factor: 4.379

Review 3.  Therapeutic drug repositioning with special emphasis on neurodegenerative diseases: Threats and issues.

Authors:  Bibhuti Bhusan Kakoti; Rajashri Bezbaruah; Nasima Ahmed
Journal:  Front Pharmacol       Date:  2022-10-03       Impact factor: 5.988

4.  Integrated network analysis identifying potential novel drug candidates and targets for Parkinson's disease.

Authors:  Pusheng Quan; Kai Wang; Shi Yan; Shirong Wen; Chengqun Wei; Xinyu Zhang; Jingwei Cao; Lifen Yao
Journal:  Sci Rep       Date:  2021-06-23       Impact factor: 4.379

  4 in total

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