Literature DB >> 34159824

Tissue outcome prediction in hyperacute ischemic stroke: Comparison of machine learning models.

Joseph Benzakoun1,2,3, Sylvain Charron1,3, Guillaume Turc1,3,4, Wagih Ben Hassen1,2, Laurence Legrand1,2, Grégoire Boulouis1,2,3, Olivier Naggara1,2,3, Jean-Claude Baron1,3,4, Bertrand Thirion5, Catherine Oppenheim1,2,3.   

Abstract

Machine Learning (ML) has been proposed for tissue fate prediction after acute ischemic stroke (AIS), with the aim to help treatment decision and patient management. We compared three different ML models to the clinical method based on diffusion-perfusion thresholding for the voxel-based prediction of final infarct, using a large MRI dataset obtained in a cohort of AIS patients prior to recanalization treatment. Baseline MRI (MRI0), including diffusion-weighted sequence (DWI) and Tmax maps from perfusion-weighted sequence, and 24-hr follow-up MRI (MRI24h) were retrospectively collected in consecutive 394 patients AIS patients (median age = 70 years; final infarct volume = 28mL). Manually segmented DWI24h lesion was considered the final infarct. Gradient Boosting, Random Forests and U-Net were trained using DWI, apparent diffusion coefficient (ADC) and Tmax maps on MRI0 as inputs to predict final infarct. Tissue outcome predictions were compared to final infarct using Dice score. Gradient Boosting had significantly better predictive performance (median [IQR] Dice Score as for median age, maybe you can replace the comma with an equal sign for consistency 0.53 [0.29-0.68]) than U-Net (0.48 [0.18-0.68]), Random Forests (0.51 [0.27-0.66]), and clinical thresholding method (0.45 [0.25-0.62]) (P < 0.001). In this benchmark of ML models for tissue outcome prediction in AIS, Gradient Boosting outperformed other ML models and clinical thresholding method and is thus promising for future decision-making.

Entities:  

Keywords:  MRI; biomarkers; neuroradiology; penumbra; stroke

Mesh:

Year:  2021        PMID: 34159824      PMCID: PMC8756479          DOI: 10.1177/0271678X211024371

Source DB:  PubMed          Journal:  J Cereb Blood Flow Metab        ISSN: 0271-678X            Impact factor:   6.960


  42 in total

1.  Apparent diffusion coefficient threshold for delineation of ischemic core.

Authors:  Archana Purushotham; Bruce C V Campbell; Matus Straka; Michael Mlynash; Jean-Marc Olivot; Roland Bammer; Stephanie M Kemp; Gregory W Albers; Maarten G Lansberg
Journal:  Int J Stroke       Date:  2013-06-27       Impact factor: 5.266

2.  The Association between Diffusion MRI-Defined Infarct Volume and NIHSS Score in Patients with Minor Acute Stroke.

Authors:  Shadi Yaghi; Charlotte Herber; Amelia K Boehme; Howard Andrews; Joshua Z Willey; Sara K Rostanski; Matthew Siket; Mahesh V Jayaraman; Ryan A McTaggart; Karen L Furie; Randolph S Marshall; Ronald M Lazar; Bernadette Boden-Albala
Journal:  J Neuroimaging       Date:  2017-01-09       Impact factor: 2.486

3.  Deep Learning of Tissue Fate Features in Acute Ischemic Stroke.

Authors:  Noah Stier; Nicholas Vincent; David Liebeskind; Fabien Scalzo
Journal:  Proceedings (IEEE Int Conf Bioinformatics Biomed)       Date:  2015-12-17

4.  Pseudo CT Estimation from MRI Using Patch-based Random Forest.

Authors:  Xiaofeng Yang; Yang Lei; Hui-Kuo Shu; Peter Rossi; Hui Mao; Hyunsuk Shim; Walter J Curran; Tian Liu
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2017-02

5.  Role of Acute Lesion Topography in Initial Ischemic Stroke Severity and Long-Term Functional Outcomes.

Authors:  Ona Wu; Lisa Cloonan; Steven J T Mocking; Mark J R J Bouts; William A Copen; Pedro T Cougo-Pinto; Kaitlin Fitzpatrick; Allison Kanakis; Pamela W Schaefer; Jonathan Rosand; Karen L Furie; Natalia S Rost
Journal:  Stroke       Date:  2015-07-21       Impact factor: 7.914

6.  Optimal Tmax threshold for predicting penumbral tissue in acute stroke.

Authors:  Jean-Marc Olivot; Michael Mlynash; Vincent N Thijs; Stephanie Kemp; Maarten G Lansberg; Lawrence Wechsler; Roland Bammer; Michael P Marks; Gregory W Albers
Journal:  Stroke       Date:  2008-12-24       Impact factor: 7.914

7.  Technical considerations of multi-parametric tissue outcome prediction methods in acute ischemic stroke patients.

Authors:  Anthony J Winder; Susanne Siemonsen; Fabian Flottmann; Götz Thomalla; Jens Fiehler; Nils D Forkert
Journal:  Sci Rep       Date:  2019-09-13       Impact factor: 4.379

8.  Use of Deep Learning to Predict Final Ischemic Stroke Lesions From Initial Magnetic Resonance Imaging.

Authors:  Yannan Yu; Yuan Xie; Thoralf Thamm; Enhao Gong; Jiahong Ouyang; Charles Huang; Soren Christensen; Michael P Marks; Maarten G Lansberg; Gregory W Albers; Greg Zaharchuk
Journal:  JAMA Netw Open       Date:  2020-03-02

9.  ISLES 2016 and 2017-Benchmarking Ischemic Stroke Lesion Outcome Prediction Based on Multispectral MRI.

Authors:  Stefan Winzeck; Arsany Hakim; Richard McKinley; José A A D S R Pinto; Victor Alves; Carlos Silva; Maxim Pisov; Egor Krivov; Mikhail Belyaev; Miguel Monteiro; Arlindo Oliveira; Youngwon Choi; Myunghee Cho Paik; Yongchan Kwon; Hanbyul Lee; Beom Joon Kim; Joong-Ho Won; Mobarakol Islam; Hongliang Ren; David Robben; Paul Suetens; Enhao Gong; Yilin Niu; Junshen Xu; John M Pauly; Christian Lucas; Mattias P Heinrich; Luis C Rivera; Laura S Castillo; Laura A Daza; Andrew L Beers; Pablo Arbelaezs; Oskar Maier; Ken Chang; James M Brown; Jayashree Kalpathy-Cramer; Greg Zaharchuk; Roland Wiest; Mauricio Reyes
Journal:  Front Neurol       Date:  2018-09-13       Impact factor: 4.003

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  2 in total

Review 1.  Clinical Imaging of the Penumbra in Ischemic Stroke: From the Concept to the Era of Mechanical Thrombectomy.

Authors:  Lucie Chalet; Timothé Boutelier; Thomas Christen; Dorian Raguenes; Justine Debatisse; Omer Faruk Eker; Guillaume Becker; Norbert Nighoghossian; Tae-Hee Cho; Emmanuelle Canet-Soulas; Laura Mechtouff
Journal:  Front Cardiovasc Med       Date:  2022-03-09

2.  Performance of Machine Learning for Tissue Outcome Prediction in Acute Ischemic Stroke: A Systematic Review and Meta-Analysis.

Authors:  Xinrui Wang; Yiming Fan; Nan Zhang; Jing Li; Yang Duan; Benqiang Yang
Journal:  Front Neurol       Date:  2022-07-08       Impact factor: 4.086

  2 in total

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