| Literature DB >> 34154624 |
Zongren Ding1,2, Kongying Lin1,2, Jun Fu1,2, Qizhen Huang1,2, Guoxu Fang1,2, Yanyan Tang3, Wuyi You3, Zhaowang Lin3, Zhan Lin3, Xingxi Pan4, Yongyi Zeng5.
Abstract
PURPOSE: We aimed to develop and validate a radiomics model for differentiating hepatocellular carcinoma (HCC) from focal nodular hyperplasia (FNH) in non-cirrhotic livers using Gd-DTPA contrast-enhanced magnetic resonance imaging (MRI).Entities:
Keywords: Focal nodular hyperplasia; Hepatocellular carcinoma; Magnetic resonance imaging; Radiomics; Zongren Ding, Kongying Lin, and Jun Fu contributed equally to this work.
Mesh:
Substances:
Year: 2021 PMID: 34154624 PMCID: PMC8215802 DOI: 10.1186/s12957-021-02266-7
Source DB: PubMed Journal: World J Surg Oncol ISSN: 1477-7819 Impact factor: 2.754
Fig. 1Workflow of this study. Firstly, manual segmentation was performed on arterial and portal venous phases MR image. Secondly, image preprocessing and feature extraction are carried out in the volume of interest (VOIs), including seven common feature groups: first order, shape, GLDM, GLCM, GLRLM, GLSZM, NGTDM. Thirdly, in training set, random forest algorithm and MRMR algorithm were used for pre-screening, and then, correlation analysis and LASSO regression were performed to screen out key features for modeling. Finally, three models were established: Clinical Model, Radiomics Model and Combined Model, and model performance were evaluated in validation set. Note: GLDM gray-level dependence matrix, GLCM gray-level cooccurence matrix, GLRLM gray-level run length matrix, GLSZM gray-level size zone matrix, NGTDM neigboring gray tone difference matrix, mRMR Max-Relevance and Min-Redundancy, LASSO the least absolute shrinkage and selection operator algorithm
Fig. 2Flow chart of patient recruitment in this study. Note: HCC hepatocellular carcinoma in noncirrhotic liver, FNH focal nodular hyperplasia
Clinical factors of the training and validation sets
| Clinical factors | Training set ( | Validation set ( | |||||
|---|---|---|---|---|---|---|---|
| HCC ( | FNH ( | HCC ( | FNH ( | ||||
| 84/20 | 18/34 | 0.001 | 40/5 | 12/11 | 0.002 | 0.136 | |
| 33/71 | 45/7 | 0.001 | 12/33 | 19/4 | 0.001 | 0.644 | |
| 21/83 | 38/14 | 0.001 | 16/29 | 16/7 | 0.016 | 0.252 | |
| 99/5 | 52/0 | 0.261 | 45/0 | 23/0 | - | 0.317 | |
| 89/15 | 36/16 | 0.028 | 40/5 | 16/7 | 0.101 | 0.838 | |
| 4.35 [2.60, 6.25] | 2.50 [1.90, 3.33] | 0.001 | 4.40 [3.00, 6.20] | 2.70 [2.05, 3.95] | 0.006 | 0.849 | |
| 78/26 | 39/13 | 1.000 | 33/12 | 20/3 | 0.331 | 0.762 | |
| 88/16 | 49/3 | 0.141 | 42/3 | 22/1 | 1.000 | 0.235 | |
| 36/68 | 30/22 | 0.010 | 16/29 | 11/12 | 0.474 | 0.829 | |
| 26/78 | 11/41 | 0.739 | 11/34 | 3/20 | 0.434 | 0.734 | |
| 46/58 | 29/23 | 0.234 | 18/27 | 16/7 | 0.040 | 0.905 | |
| 67/37 | 28/24 | 0.270 | 24/21 | 13/10 | 1.000 | 0.448 | |
Heterogeneous/homogeneous | 68/36 | 21/31 | 0.005 | 29/16 | 7/16 | 0.016 | 0.672 |
| 86/18 | 49/3 | 0.082 | 38/7 | 22/1 | 0.337 | 0.895 | |
| 90/14 | 49/3 | 0.238 | 36/9 | 21/2 | 0.396 | 0.380 | |
| 82/22 | 37/15 | 0.387 | 40/5 | 14/9 | 0.017 | 0.734 | |
| 0.001 | 0.001 | 0.56 | |||||
| Early enhancement + washout | 82 | 15 | - | 36 | 7 | - | - |
| Early enhancement + no washout | 14 | 35 | - | 7 | 16 | - | - |
| Other patterns | 8 | 2 | - | 2 | 0 | - | - |
Note: HCC hepatocellular carcinoma in noncirrhotic liver, FNH focal nodular hyperplasia, HbsAg hepatitis B surface antigen, AFP alpha fetoprotein; * represents the P value of comparison between training and validation set
Fig. 3Dimensionality reduction and Radiomics Model construction. a The 20 features selected by the mRMR algorithm according to features score. b The 20 features selected by the Random forests algorithm according to features importance. c The correlation analysis heatmap of 33 features screened by the two algorithms above (seven overlapping features were removed). d LASSO regression analysis of 33 features, the vertical line shows the optimal value of λ= 0.041 and 8 corresponding features with non-zero coefficients. e The AUC curve was plotted by tuning parameter (λ) selection performed by 10-fold cross-validation. Vertical lines on the left and right denote the minimum criterion and 1-standard error criterion (1-SE), respectively. The 1-SE criterion was applied
Fig. 4Rad score of NC-HCC and FNH in training (a) and validation (b) set. NC-HCC has a higher Rad score than FNH both in training and validation set. Rad score=-6.68*(PVP-glcm-wavelet-HHL-InverseVariance)-3.87*(AP-firstorder-original-10Percentile)-2.81*(PVP-glcm-log-sigma-1-5-mm-3D-MaximumProbability)-1.65*(PVP-glcm-MaximumProbability)+0.08*(AP-glcm-log-sigma-1-0-mm-3D-ClusterShade)+0.11*(PVP-firstorder-wavelet-HLL-Median)+0.54*(AP-firstorder-log-sigma-0-5-mm-3D-Median)+1.81*(AP-shape-original-Elongation)
Model performance in the training and validation sets
| Model | Cutoff | AUC(95%CI) | Specificity | Sensitivity | Accuracy | |
|---|---|---|---|---|---|---|
| Clinical Model | 0.684 | 0.937(0.887-0.970) | 0.923 | 0.817 | 0.853 | Ref |
| Radiomics Model | 0.695 | 0.960(0.916-0.985) | 0.942 | 0.904 | 0.917 | 0.252 |
| Combined Model | 0.607 | 0.984(0.949-0.997) | 0.962 | 0.952 | 0.956 | 0.002 |
| Clinical Model | 0.625 | 0.903(0.807-0.962) | 0.826 | 0.867 | 0.853 | Ref |
| Radiomics Model | 0.658 | 0.931(0.843-0.978) | 0.826 | 0.889 | 0.868 | 0.535 |
| Combined Model | 0.859 | 0.972(0.900-0.997) | 0.957 | 0.933 | 0.941 | 0.032 |
Note: AUC area under the curve, CI confidence interval
Fig. 5ROC curves comparing the three models in training (a) and validation (b) set. The hollow point represents the optimal cut-off value on the curve