Literature DB >> 34134992

Cryo-EM structure of the photosynthetic RC-LH1-PufX supercomplex at 2.8-Å resolution.

Laura Bracun1,2, Atsushi Yamagata2, Bern M Christianson1, Tohru Terada3, Daniel P Canniffe1, Mikako Shirouzu2, Lu-Ning Liu4,5.   

Abstract

The reaction center (RC)-light-harvesting complex 1 (LH1) supercomplex plays a pivotal role in bacterial photosynthesis. Many RC-LH1 complexes integrate an additional protein PufX that is key for bacterial growth and photosynthetic competence. Here, we present a cryo-electron microscopy structure of the RC-LH1-PufX supercomplex from Rhodobacter veldkampii at 2.8-Å resolution. The RC-LH1-PufX monomer contains an LH ring of 15 αβ-polypeptides with a 30-Å gap formed by PufX. PufX acts as a molecular "cross brace" to reinforce the RC-LH1 structure. The unusual PufX-mediated large opening in the LH1 ring and defined arrangement of proteins and cofactors provide the molecular basis for the assembly of a robust RC-LH1-PufX supercomplex and efficient quinone transport and electron transfer. These architectural features represent the natural strategies for anoxygenic photosynthesis and environmental adaptation.
Copyright © 2021 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works. Distributed under a Creative Commons Attribution License 4.0 (CC BY).

Entities:  

Year:  2021        PMID: 34134992      PMCID: PMC8208714          DOI: 10.1126/sciadv.abf8864

Source DB:  PubMed          Journal:  Sci Adv        ISSN: 2375-2548            Impact factor:   14.136


  56 in total

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Authors:  Conrad W Mullineaux; Lu-Ning Liu
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3.  The 17-propionate esterifying variants of bacteriochlorophyll-a and bacteriopheophytin-a in purple photosynthetic bacteria.

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Journal:  J Photochem Photobiol B       Date:  2014-12-19       Impact factor: 6.252

4.  Unfolding pathway and intermolecular interactions of the cytochrome subunit in the bacterial photosynthetic reaction center.

Authors:  Leanne C Miller; Longsheng Zhao; Daniel P Canniffe; David Martin; Lu-Ning Liu
Journal:  Biochim Biophys Acta Bioenerg       Date:  2020-04-17       Impact factor: 3.991

5.  Update of the CHARMM all-atom additive force field for lipids: validation on six lipid types.

Authors:  Jeffery B Klauda; Richard M Venable; J Alfredo Freites; Joseph W O'Connor; Douglas J Tobias; Carlos Mondragon-Ramirez; Igor Vorobyov; Alexander D MacKerell; Richard W Pastor
Journal:  J Phys Chem B       Date:  2010-06-17       Impact factor: 2.991

6.  Cardiolipin deficiency in Rhodobacter sphaeroides alters the lipid profile of membranes and of crystallized cytochrome oxidase, but structure and function are maintained.

Authors:  Xi Zhang; Banita Tamot; Carrie Hiser; Gavin E Reid; Christoph Benning; Shelagh Ferguson-Miller
Journal:  Biochemistry       Date:  2011-04-22       Impact factor: 3.162

7.  X-ray structure determination of the cytochrome c2: reaction center electron transfer complex from Rhodobacter sphaeroides.

Authors:  Herbert L Axelrod; Edward C Abresch; Melvin Y Okamura; Andrew P Yeh; Douglas C Rees; George Feher
Journal:  J Mol Biol       Date:  2002-05-31       Impact factor: 5.469

8.  Structures of Rhodopseudomonas palustris RC-LH1 complexes with open or closed quinone channels.

Authors:  David J K Swainsbury; Pu Qian; Philip J Jackson; Kaitlyn M Faries; Dariusz M Niedzwiedzki; Elizabeth C Martin; David A Farmer; Lorna A Malone; Rebecca F Thompson; Neil A Ranson; Daniel P Canniffe; Mark J Dickman; Dewey Holten; Christine Kirmaier; Andrew Hitchcock; C Neil Hunter
Journal:  Sci Adv       Date:  2021-01-13       Impact factor: 14.136

9.  OPM database and PPM web server: resources for positioning of proteins in membranes.

Authors:  Mikhail A Lomize; Irina D Pogozheva; Hyeon Joo; Henry I Mosberg; Andrei L Lomize
Journal:  Nucleic Acids Res       Date:  2011-09-02       Impact factor: 16.971

10.  Estimation of high-order aberrations and anisotropic magnification from cryo-EM data sets in RELION-3.1.

Authors:  Jasenko Zivanov; Takanori Nakane; Sjors H W Scheres
Journal:  IUCrJ       Date:  2020-02-11       Impact factor: 4.769

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  6 in total

1.  Cryo-EM structure of the dimeric Rhodobacter sphaeroides RC-LH1 core complex at 2.9 Å: the structural basis for dimerisation.

Authors:  Pu Qian; Tristan I Croll; Andrew Hitchcock; Philip J Jackson; Jack H Salisbury; Pablo Castro-Hartmann; Kasim Sader; David J K Swainsbury; C Neil Hunter
Journal:  Biochem J       Date:  2021-11-12       Impact factor: 3.857

2.  Structural basis for the assembly and quinone transport mechanisms of the dimeric photosynthetic RC-LH1 supercomplex.

Authors:  Peng Cao; Laura Bracun; Atsushi Yamagata; Bern M Christianson; Tatsuki Negami; Baohua Zou; Tohru Terada; Daniel P Canniffe; Mikako Shirouzu; Mei Li; Lu-Ning Liu
Journal:  Nat Commun       Date:  2022-04-13       Impact factor: 17.694

3.  Cryo-EM structure of the Rhodospirillum rubrum RC-LH1 complex at 2.5 Å.

Authors:  Pu Qian; Tristan I Croll; David J K Swainsbury; Pablo Castro-Hartmann; Nigel W Moriarty; Kasim Sader; C Neil Hunter
Journal:  Biochem J       Date:  2021-09-17       Impact factor: 3.857

4.  Asymmetric structure of the native Rhodobacter sphaeroides dimeric LH1-RC complex.

Authors:  Kazutoshi Tani; Ryo Kanno; Riku Kikuchi; Saki Kawamura; Kenji V P Nagashima; Malgorzata Hall; Ai Takahashi; Long-Jiang Yu; Yukihiro Kimura; Michael T Madigan; Akira Mizoguchi; Bruno M Humbel; Zheng-Yu Wang-Otomo
Journal:  Nat Commun       Date:  2022-04-07       Impact factor: 14.919

5.  Cryo-EM Structure of the Rhodobacter sphaeroides Light-Harvesting 2 Complex at 2.1 Å.

Authors:  Pu Qian; David J K Swainsbury; Tristan I Croll; Pablo Castro-Hartmann; Giorgio Divitini; Kasim Sader; C Neil Hunter
Journal:  Biochemistry       Date:  2021-10-26       Impact factor: 3.162

6.  A previously unrecognized membrane protein in the Rhodobacter sphaeroides LH1-RC photocomplex.

Authors:  Kazutoshi Tani; Kenji V P Nagashima; Ryo Kanno; Saki Kawamura; Riku Kikuchi; Malgorzata Hall; Long-Jiang Yu; Yukihiro Kimura; Michael T Madigan; Akira Mizoguchi; Bruno M Humbel; Zheng-Yu Wang-Otomo
Journal:  Nat Commun       Date:  2021-11-02       Impact factor: 14.919

  6 in total

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