Literature DB >> 34117604

Silica and secondary metabolites as chemophenetic markers for characterization of bamboo species in relation to genetic and morphometric analysis.

Maroti P Sonarkhan1, Lal Singh1, Sarawood Sungkaew2, Keooudone Souvannakhoummane3, Sanjog T Thul4.   

Abstract

Bamboo is a non-timber forest product and one of the most important grass plants of industrial and domestic use. It is widely distributed in tropical countries including India, China and Southeast Asian countries with wide genetic diversity. The diversity in the available genotypes becomes an important resource for the selection and improvement of the plants for ecological and commercial use. This study investigates eight commercially and ecologically important bamboo species of six genera (Bambusa, Dendrocalamus, Thyrsostachys, Vietnamosasa, Cephalostachyum and Indocalamus) from India, Thailand and Laos. These were evaluated for genetic differences by molecular makers, chemo-morphological variation and ability of silicon accumulation. The genetic cluster analyses of eight RAPD primers revealed genetic similarities in the ranges of 24-55%. The total silica content varied from 18.34 to 40.08 ppm in leaves of different bamboo species. Chemical analysis of the silicon content by ICP-OES and secondary metabolite profiling on TLC depicted the prominent distinction among the species. The PCA analysis of quantitative morphological data grouped the species in two major clusters and found to correlate with chemical pattern and genetic similarity to some extent. This is the first report that summarizes species-specific variability of leaf silica content, secondary metabolites, and quantitative morphological data towards delineation of genetic phylogeny of bamboo species.

Entities:  

Keywords:  Bamboo; ICP-OES; Molecular markers; Silica; TLC

Mesh:

Substances:

Year:  2021        PMID: 34117604     DOI: 10.1007/s11033-021-06469-9

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  14 in total

1.  Genetic variation and association mapping of silica concentration in rice hulls using a germplasm collection.

Authors:  R Bryant; A Proctor; M Hawkridge; A Jackson; K Yeater; P Counce; W Yan; A McClung; R Fjellstrom
Journal:  Genetica       Date:  2012-03-09       Impact factor: 1.082

2.  Impact of geographic range on genetic and chemical diversity of Indian valerian (Valeriana jatamansi) from northwestern Himalaya.

Authors:  V Sundaresan; G Sahni; R S Verma; R C Padalia; S Mehrotra; Sanjog T Thul
Journal:  Biochem Genet       Date:  2012-06-23       Impact factor: 1.890

3.  Comparative assessment of genetic diversity among Indian bamboo genotypes using RAPD and ISSR markers.

Authors:  Parth Desai; Bhavesh Gajera; Mounil Mankad; Shikha Shah; Armi Patel; Ghanshyam Patil; Subhash Narayanan; Nitish Kumar
Journal:  Mol Biol Rep       Date:  2015-03-13       Impact factor: 2.316

4.  Phenolic compounds and anti-oxidant capacity of twelve morphologically heterogeneous bamboo species.

Authors:  Laura Van Hoyweghen; Thomas De Beer; Dieter Deforce; Arne Heyerick
Journal:  Phytochem Anal       Date:  2012-01-02       Impact factor: 3.373

5.  Mathematical model for studying genetic variation in terms of restriction endonucleases.

Authors:  M Nei; W H Li
Journal:  Proc Natl Acad Sci U S A       Date:  1979-10       Impact factor: 11.205

6.  A major occasion.

Authors:  T R Pfundt
Journal:  Nebr State Med J       Date:  1968-08

7.  The Effect of Silicon on Osmotic and Drought Stress Tolerance in Wheat Landraces.

Authors:  Sarah J Thorne; Susan E Hartley; Frans J M Maathuis
Journal:  Plants (Basel)       Date:  2021-04-20

8.  UV induced visual cues in grasses.

Authors:  Sabulal Baby; Anil John Johnson; Balaji Govindan; Sujith Lukose; Bhaskaran Gopakumar; Konnath Chacko Koshy
Journal:  Sci Rep       Date:  2013       Impact factor: 4.379

9.  Phylogenetic variation of phytolith carbon sequestration in bamboos.

Authors:  Beilei Li; Zhaoliang Song; Zimin Li; Hailong Wang; Renyi Gui; Ruisheng Song
Journal:  Sci Rep       Date:  2014-04-16       Impact factor: 4.379

Review 10.  Silicon: Potential to Promote Direct and Indirect Effects on Plant Defense Against Arthropod Pests in Agriculture.

Authors:  Olivia L Reynolds; Matthew P Padula; Rensen Zeng; Geoff M Gurr
Journal:  Front Plant Sci       Date:  2016-06-13       Impact factor: 5.753

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