| Literature DB >> 34093238 |
Abstract
The two lipocalins, β-lactoglobulin (βLg) and glycodelin (Gd), are possibly the most closely related members of the large and widely distributed lipocalin family, yet their functions appear to be substantially different. Indeed, the function of β-lactoglobulin, a major component of ruminant milk, is still unclear although neonatal nutrition is clearly important. On the other hand, glycodelin has several specific functions in reproduction conferred through distinct, tissue specific glycosylation of the polypeptide backbone. It is also associated with some cancer outcomes. The glycodelin gene, PAEP, reflecting one of its names, progestagen-associated endometrial protein, is expressed in many though not all primates, but the name has now also been adopted for the β-lactoglobulin gene (HGNC, www.genenames.org). After a general overview of the two proteins in the context of the lipocalin family, this review considers the properties of each in the light of their physiological functional significance, supplementing earlier reviews to include studies from the past decade. While the biological function of glycodelin is reasonably well defined, that of β-lactoglobulin remains elusive.Entities:
Keywords: PAEP; biological function; glycodelin; lipocalin; β-lactoglobulin
Year: 2021 PMID: 34093238 PMCID: PMC8173191 DOI: 10.3389/fphys.2021.678080
Source DB: PubMed Journal: Front Physiol ISSN: 1664-042X Impact factor: 4.566
FIGURE 1(A) Alignment of the protein sequence of cow β-lactoglobulin B variant (LG-B) with that of human glycodelin (PAEP, Gd) showing the structurally conserved regions (SCR) in the lipocalin family boxed in pale green. Every 10th amino acid is colored blue and the secondary structural elements shown as cylinders for helices and arrows for β-strands, labeled as they are in the crystal structure. Uncolored structural elements appear in only one structure both structures and disulphide bridges are shown as yellow arrows with the partner residue number. Glycosylation sites in Gd are marked with red triangles, that at 85 being unused, while the ligand-gating Glu89 in βLg is shown as a blue triangle. The residues lining the central calyx are marked above/below with black dots, from which it will be seen that the cavity in Gd is very much smaller than that in βLg (Schiefner et al., 2015). (B) A cartoon showing the remarkable similarity of monomers of βLg (PDB: 1gxa, blue-gray) and Gd (PDB: 4r0b, olive). The βLg structure has a molecule of palmitate bound within the central calyx (carbon atoms in green, oxygen in red). The β-strands are labeled as in (A). The helix is at the rear and the structurally conserved regions (SCR1-3) are indicated by residues Trp19, Asp98 and Arg124 in blue, all on the outer surface at the foot of the calyx. Glu89 in βLg which is on the EF-loop in the open position is close to the unglycosylated Asn85 in Gd shown in pink. The other residues in pink, Asn63 and Glu28, show the positions of the glycosylation present in native Gd. The mutation Asn28Glu was necessary to improve the solubility of the cloned Gd used in the X-ray analysis. Dimerization involves the I-strand in both proteins but there is significantly greater interaction in Gd (1170 Å2 buried surface area) compared to βLg (530 Å2) despite the remarkable overall similarity (the rmsd of the 160 Cα atoms is about 0.65Å). The carbon chain of palmitate is green. Figure drawn by CCP4mg (McNicholas et al., 2011).
FIGURE 2A cladogram showing the relative amino acid sequence relationship of a selection of β-lactoglobulin (βLg), glycodelin (Gd) and retinol-binding protein (RBP) sequences, RBP being included as an outgroup to the βLgs and Gds. The inset shows the relationship between domesticated ruminant β-lactoglobulins. Note the difference in the branch-length scales. The amino acid sequences were aligned by CLUSTAL-Ω (Sievers et al., 2011) using its default parameters, and the cladogram was produced by the program PHYLOGENY.fr (Dereeper et al., 2008). The sequences used were UniProtKB (The UniProt Consortium, 2019) unless otherwise mentioned. Lactoglobulins: Platypus (F6SX48), Wallaby (Q29614), Possum (Q29146), Orangutan (NCBI: XP_002820419), Macaque (NCBI: XP_005580520), Baboon (O77511), Pig (P04119), Cow B variant (P02754), Beluga (NCBI: XP_022433973.1), Dolphin (A0A6J3RLE3), Cat I (P33687), Donkey I (P13613), Donkey II (P19647), Cat II (P21664), Cat_III (P33688), Fur Seal (A0A3Q7NUB2-1), Reindeer (Q00P86), Yak (L8J1Z0), Bison (NCBI: XP_010855058), Sheep B (P02757), Water buffalo (P02755), and Goat (P02756). Glycodelins: Gd_Human (P09466), Gd_Orangutan (NCBI: XP_00377753), Gd_Macaque (Q5BM07), Pseudogenes: Cow βLg pseudogene (Genbank: Z36937), Goat βLg pseudogene (Genbank: Z47079), Human βLg pseudogene (Ensembl: hg38_dna.[2298:6285].sp.tr), Retinol Binding Proteins: Toad RBP (P06172), Human RBP (P02753), and Chicken RBP (P41263).
Milk composition for a range of animals1.
| Source | Fat %2 | Protein %2 | Whey %2 | βLg2 mg/ml | PAEP3 | References | |
| Cow | 3.7 | 3.6 | 0.6 | 3.0 | ? | ||
| Goat | 4.5 | 2.9 | 0.4 | 1.4 | |||
| Sheep | 7.4 | 5.5 | 0.9 | 2.8 | |||
| Red deer | 19.7 | 10.6 | 2.9 | ||||
| Pig | 6.8 | 4.8 | 2.0 | 0.62 | |||
| Dog | 12.9 | 7.9 | 2.1 | 10.1 | |||
| Cat | 4.8 | 7.0 | 3.3 | ||||
| Horse | 1.9 | 2.5 | 1.3 | 2.6 | |||
| Dolphin | 33.0 | 6.8 | 2.9 | 16.2 | |||
| Fur seal | 53.2 | 9.6 | 4.9 | 254 | |||
| Red kangaroo | 3.4 | 4.6 | 2.3 | ||||
| Tammar wallaby | 3.6 | 2.6 | 6.75 | ||||
| Opossum | 7.0 | 4.8 | 2.0 | ||||
| Echidna | 9.6 | 12.5 | 5.2 | 156 | |||
| Yellow baboon | 5.0 | 1.6 | 0.5 | Yes | |||
| Rhesus monkey | 4.0 | 1.6 | 0.5 | 2.8 | Yes | ||
| Human | 3.8 | 1.0 | 0.6 | ∼07 | Yes | ||
| Mouse | 13.1 | 9.0 | 2.0 | 0.0 | |||
| Rat | 10.3 | 8.4 | 2.0 | 0.0 | ? | ||
| Rabbit | 12.9 | 12.3 | 3.7 | 0.0 | |||
FIGURE 3(A) A model of the glycosylated physiological dimer of Gd-A viewed down its two-fold axis, showing the two subunits as surface representations in pale green and blue with the branched sugar moieties on Asn28 and Asn63 shown as space-filling with the conventional elemental coloring. (B) Schematic representation of the typical major glycan structures found in Gd-A, a female amniotic fluid form on the left with that of Gd-S, the male seminal fluid form on the right (Dell et al., 1995; Morris et al., 1996). (A,B) Reproduced from Schiefner et al. (2015) with permission.