Literature DB >> 34085275

Gradient Tracking by Yeast GPCRs in a Microfluidics Chamber.

Sara Kimiko Suzuki1, Joshua B Kelley2, Timothy C Elston3,4,5, Henrik G Dohlman6,7.   

Abstract

Cells typically exist in a highly dynamic environment, which cannot easily be recreated in culture dishes or microwell plates. Microfluidic devices can provide precise control of the time, dose, and orientation of a stimulus, while simultaneously capturing quantitative single-cell data. The approach is particularly powerful when combined with the genetically tractable yeast model organism. The GPCR pathway in yeast is structurally conserved and functionally interchangeable with those in humans. We describe the implementation of a microfluidic device to investigate morphological and transcriptional responses of yeast to a gradient or pulse administration of a GPCR ligand, the peptide mating pheromone α-factor.

Entities:  

Keywords:  Cell biology; G protein-coupled receptor; Gradient; Microfluidics; Yeast

Year:  2021        PMID: 34085275      PMCID: PMC8188611          DOI: 10.1007/978-1-0716-1221-7_18

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  21 in total

1.  In Situ Assays of Chemotropism During Yeast Mating.

Authors:  David E Stone; Robert A Arkowitz
Journal:  Methods Mol Biol       Date:  2016

2.  Designer deletion strains derived from Saccharomyces cerevisiae S288C: a useful set of strains and plasmids for PCR-mediated gene disruption and other applications.

Authors:  C B Brachmann; A Davies; G J Cost; E Caputo; J Li; P Hieter; J D Boeke
Journal:  Yeast       Date:  1998-01-30       Impact factor: 3.239

3.  Quantitative analysis of the yeast pheromone pathway.

Authors:  James P Shellhammer; Amy E Pomeroy; Yang Li; Lorena Dujmusic; Timothy C Elston; Nan Hao; Henrik G Dohlman
Journal:  Yeast       Date:  2019-06-27       Impact factor: 3.239

4.  Microfluidics for synthetic biology: from design to execution.

Authors:  M S Ferry; I A Razinkov; J Hasty
Journal:  Methods Enzymol       Date:  2011       Impact factor: 1.600

Review 5.  Microfluidic devices for measuring gene network dynamics in single cells.

Authors:  Matthew R Bennett; Jeff Hasty
Journal:  Nat Rev Genet       Date:  2009-08-11       Impact factor: 53.242

6.  Polarization of yeast cells in spatial gradients of alpha mating factor.

Authors:  J E Segall
Journal:  Proc Natl Acad Sci U S A       Date:  1993-09-15       Impact factor: 11.205

7.  Single-cell dynamics and variability of MAPK activity in a yeast differentiation pathway.

Authors:  Patrick Conlon; Rita Gelin-Licht; Ambhighainath Ganesan; Jin Zhang; Andre Levchenko
Journal:  Proc Natl Acad Sci U S A       Date:  2016-09-20       Impact factor: 11.205

8.  Role of Polarized G Protein Signaling in Tracking Pheromone Gradients.

Authors:  Allison W McClure; Maria Minakova; Jayme M Dyer; Trevin R Zyla; Timothy C Elston; Daniel J Lew
Journal:  Dev Cell       Date:  2015-11-23       Impact factor: 12.270

9.  Regulation of cell signaling dynamics by the protein kinase-scaffold Ste5.

Authors:  Nan Hao; Sujata Nayak; Marcelo Behar; Ryan H Shanks; Michal J Nagiec; Beverly Errede; Jeffrey Hasty; Timothy C Elston; Henrik G Dohlman
Journal:  Mol Cell       Date:  2008-06-06       Impact factor: 19.328

10.  Pheromone-induced morphogenesis and gradient tracking are dependent on the MAPK Fus3 binding to Gα.

Authors:  Beverly Errede; Lior Vered; Eintou Ford; Matthew I Pena; Timothy C Elston
Journal:  Mol Biol Cell       Date:  2015-07-15       Impact factor: 4.138

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  1 in total

1.  Phosphorylation of RGS regulates MAP kinase localization and promotes completion of cytokinesis.

Authors:  William C Simke; Cory P Johnson; Andrew J Hart; Sari Mayhue; P Lucas Craig; Savannah Sojka; Joshua B Kelley
Journal:  Life Sci Alliance       Date:  2022-08-19
  1 in total

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