| Literature DB >> 34073484 |
Tove Hoffman1, Linda Kolstad1, Johanna F Lindahl1, Bo Albinsson1,2, Anders Bergqvist2,3, Bengt Rönnberg1,2, Åke Lundkvist1.
Abstract
Due to the current, rapidly increasing Coronavirus disease 2019 (COVID-19) pandemic, efficient and highly specific diagnostic methods are needed. The receptor-binding part of the spike (S) protein, S1, has been suggested to be highly virus-specific; it does not cross-react with antibodies against other coronaviruses. Three recombinant partial S proteins of severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) expressed in mammalian or baculovirus-insect cells were evaluated as antigens in a Luminex-based suspension immunoassay (SIA). The best performing antigen (S1; amino acids 16-685) was selected and further evaluated by serum samples from 76 Swedish patients or convalescents with COVID-19 (previously PCR and/or serologically confirmed), 200 pre-COVID-19 individuals (180 blood donors and 20 infants), and 10 patients with acute Epstein-Barr virus infection. All 76 positive samples showed detectable antibodies to S1, while none of the 210 negative controls gave a false positive antibody reaction. We further compared the COVID-19 SIA with a commercially available enzyme immunoassay and a previously evaluated COVID-19 rapid antibody test. The results revealed an overall assay sensitivity of 100%, a specificity of 100% for both IgM and IgG, a quantitative ability at concentrations up to 25 BAU/mL, and a better performance as compared to the commercial assays, suggesting the COVID-19 SIA as a most valuable tool for efficient laboratory-based serology.Entities:
Keywords: COVID-19; Coronavirus; IgG; IgM; SARS-CoV-2; serology
Mesh:
Substances:
Year: 2021 PMID: 34073484 PMCID: PMC8227055 DOI: 10.3390/v13060993
Source DB: PubMed Journal: Viruses ISSN: 1999-4915 Impact factor: 5.048
Evaluated recombinant SARS-CoV-2 antigens.
| Recombinant | Target | Region (aa) | Catalogue Number | Expression | Tag | Manufactured by |
|---|---|---|---|---|---|---|
| (A) SARS-CoV-2 | S1 | 16–685 | 40591-V08H | HEK293 cells | His | Sino |
| (B) SARS-CoV-2 | S1+S2 ECD | 16–1213 | 40589-V08B1 | Baculovirus-insect cells | His | Sino |
| (C) SARS-CoV-2 | S1 | 1–674 | REC1806 | HEK293 cells | Sheep Fc | Native |
aa, amino acid; ECD, extracellular domain; SARS-CoV-2, severe acute respiratory syndrome coronavirus-2; S1, spike subunit 1; S2, spike subunit 2; ECD, extra cellular domain; HEK, human embryonic kidney; His, histidine; Fc, Fc domain of immunoglobulin.
Assay variability of the COVID-19 SIA.
| Assay Variation | Intra | Inter | ||
|---|---|---|---|---|
| Isotype | IgM | IgG | IgM | IgG |
| 2508 | 1391 | 2584 | 1446 | |
| 2584 | 1446 | 2566 | 1442 | |
| 2688 | 1411 | 2374 | 1348 | |
| 2651 | 1432 | 2525 | 1394 | |
| 2403 | 1366 | 2319 | 1263 | |
| Mean | 2567 | 1409 | 2474 | 1379 |
| SD | 115 | 32 | 120 | 76 |
| %CV | 4 | 2 | 5 | 6 |
COVID-19, Coronavirus disease 2019; SIA, suspension immunoassay; SD, standard deviation; CV, coefficient of variability; Ig, immunoglobulin; MFI, median fluorescence intensity.
Seropositive rate of control sera against S1 protein (aa 16-685) of SARS-CoV-2.
| IgM | IgG | Total Ab (IgM + IgG) | ||||
|---|---|---|---|---|---|---|
| n | % (95% CI) | n | % (95% CI) | n | % (95% CI) | |
| Blood donors | 0/180 | 0.0 (0.0–2.0) * | 0/180 | 0.0 (0.0–2.0) * | 0/180 | 0.0 (0.0–2.0) * |
| Infants | 0/20 | 0.0 (0.0–16.8) * | 0/20 | 0.0 (0.0–16.8) * | 0/20 | 0.0 (0.0–16.8) * |
| Patients with | 0/10 | 0.0 (0.0–30.8) * | 0/10 | 0.0 (0.0–30.8) * | 0/10 | 0.0 (0.0–30.8) * |
| Patients/ | 70/76 | 92.1 (83.6–97.0) | 75/76 | 98.7 (92.9–99.9) | 76/76 | 100 (95.3–100) * |
S1, spike subunit 1; RBD, receptor binding domain; CI, confidence interval; Ig, immunoglobulin; Ab, antibodies; EBV, Epstein-Barr virus; * One sided 97.5% confidence interval.
Figure 1Specificity of the COVID-19 SIA. (A) Results for anti-S1 IgM. (B) Results for anti-S1 IgG. The control panel included sera from blood donors, infants, patients with acute Epstein-Barr virus (EBV) infection, and patients/convalescents with COVID-19. The dashed line indicates the assay cut-off of 300 MFI and the vertical line the median. MFI, median fluorescence intensity; Ig, immunoglobulin; COVID-19, Coronavirus disease 2019; SIA, suspension immunoassay; S1, spike subunit 1.
Evaluation results of the COVID-19 SIA.
| IgM | IgG | Total Ab (IgM + IgG) | ||||
|---|---|---|---|---|---|---|
| n | % (95% CI) | n | % (95% CI) | n | % (95% CI) | |
| Sensitivity | 70/76 | 92.1 (83.6–97.0) | 75/76 | 98.7 (92.9–99.9) | 76/76 | 100 (93.8–100) * |
| Specificity | 210/210 | 100 (98.3–100) * | 210/210 | 100 (97.7–100) * | 210/210 | 100 (98.3–100) * |
| PPV # | 70/70 | 100 (94.9–100) * | 75/75 | 100 (95.2–100) * | 76/76 | 100 (95.3–100) * |
| NPV # | 210/216 | 97.2 (94.1–99.0) | 210/211 | 99.5 (97.4–100) | 210/210 | 100 (98.3–100) * |
COVID-19, Coronavirus disease 2019; SIA, suspension immunoassay; Ig, immunoglobulin; Ab, antibodies; CI, confidence interval; PPV, positive predictive value; NPV, negative predictive value; * one sided 97.5% confidence interval; # Study seropositivity = 26.6% (76/286); #, number.
Figure 2Predictive values of the COVID-19 SIA at three different seroprevalences. The predictive values were plotted as a function of seroprevalence using the values for sensitivity and specificity in Table 4 and the following formulas: Positive predictive value = (seroprevalence * sensitivity) / ((seroprevalence * sensitivity) + ((1 − seroprevalence) * (1 − specificity))); Negative predictive value = ((1 − seroprevalence) * specificity) / ((seroprevalence * (1 – sensitivity)) + ((1 – seroprevalence) * specificity)). COVID-19, Coronavirus disease 2019; SIA, suspension immunoassay; Ig, immunoglobulin, Ab, IgM + IgG.
Figure 3Sensitivity testing of the COVID-19 SIA, using the WHO international standard for anti-SARS-CoV-2 immunoglobulins. The dashed line indicates the assay cut-off of 300 MFI. MFI, median fluorescence intensity; BAU, binding antibody unit; Ig, immunoglobulin.
Titer comparison of the WHO international reference panel for anti-SARS-CoV-2 immunoglobulins.
| Antibody Titer | NIBSC BAU/mL | COVID-19 SIA | Plot b | COVID-19 SIA c |
|---|---|---|---|---|
| Low (20/149) | 46 | 468 | 0.39 | 39 |
| Low S, High N (20/144) | 50 | 618 | 0.59 | 59 |
| Mid (20/148) | 246 | 2352 | 2.8 | 280 |
| High (20/150) | 766 | 4052 | 6.14 | 614 |
| Negative (20/142) | ND | 9 d | ND | ND |
a Dilution: 1:100; b Estimated from Figure 3; c Estimated concentration in original sample; d Cut-off for seropositivity = 300 MFI; COVID-19, Coronavirus disease 2019; SIA, suspension immunoassay; S1, spike subunit 1; RBD, receptor binding domain; BAU, binding antibody unit, ND, not determined.
Assay comparison with titer presentation of positive serum samples.
| COVID-19 | Orient Gene | WANTAI | |||
|---|---|---|---|---|---|
| Sample # | IgM | IgG | IgM | IgG | Total Ab |
| 1 | 1:2500 | 1:2500 | 1:50 | 1:10 | 1:6250 |
| 2 | 1:500 | 1:100 | 1:10 | 1:10 | 1:250 |
| 3 | 1:100 | 1:2500 | 1:1 | 1:10 | 1:250 |
| 4 | 1:2500 | ≥1:12,500 | 1:50 | 1:50 | 1:6250 |
| 5 | 1:2500 | 1:500 | 1:50 | 1:10 | 1:1250 |
| 6 | 1:100 | 1:12,500 | 1:10 | 1:10 | 1:250 |
| 7 | 1:12,500 | 1:12,500 | 1:50 | 1:50 | 1:6250 |
| 8 | 1:100 | 1:2500 | 1:10 | 1:10 | 1:50 |
| 9 | 1:2500 | 1:12,500 | 1:10 | 1:10 | 1:6250 |
| 10 | 1:12,500 | 1:12,500 | 1:50 | 1:50 | 1:6250 |
| 11 | 1:62,500 | 1:12,500 | 1:50 | 1:50 | 1:6250 |
Ig, immunoglobulin; Ab, antibodies; COVID-19, Coronavirus disease 2019; SIA, suspension immunoassay; * Additional 1:17 dilution (5 μL serum and 80 μL buffer during analysis). # Study seropositivity = 26.6% (76/286); #, number.