Abhimanyu Kiran1, Navin Kumar1, Vishwajeet Mehandia2. 1. Department of Mechanical Engineering, Indian Institute of Technology Ropar, Rupnagar 140001, Punjab, India. 2. Department of Chemical Engineering, Indian Institute of Technology Ropar, Rupnagar 140001, Punjab, India.
Abstract
Collective cell migration is often seen in many biological processes like embryogenesis, cancer metastasis, and wound healing. Despite extensive experimental and theoretical research, the unified mechanism responsible for collective cell migration is not well known. Most of the studies have investigated artificial model wound to study the collective cell migration in an epithelial monolayer. These artificial model wounds possess a high cell number density compared to the physiological scenarios like wound healing (cell damage due to applied cut) and cancer metastasis (smaller cell clusters). Therefore, both systems may not completely relate to each other, and further investigation is needed to understand the collective cell migration in physiological scenarios. In an effort to fill this existing knowledge gap, we investigated the freely expanding monolayer that closely represented the physiological scenarios and compared it with the artificially created model wound. In the present work, we report the effect of initial boundary conditions (free and confined) on the collective cell migration of the epithelial cell monolayer. The expansion and migration aspects of the freely expanding and earlier-confined monolayer were investigated at the tissue and cellular levels. The freely expanding monolayer showed significantly higher expansion and lower migration in comparison to the earlier-confined monolayer. The expansion and migration rate of the monolayer exhibited a strong negative correlation. The study highlights the importance of initial boundary conditions in the collective cell migration of the expanding tissue and provides useful insights that might be helpful in the future to tune the collective cell migration in wound healing, cancer metastasis, and tissue formation.
Collective cell migration is often seen in many biological processes like embryogenesis, cancer metastasis, and wound healing. Despite extensive experimental and theoretical research, the unified mechanism responsible for collective cell migration is not well known. Most of the studies have investigated artificial model wound to study the collective cell migration in an epithelial monolayer. These artificial model wounds possess a high cell number density compared to the physiological scenarios like wound healing (cell damage due to applied cut) and cancer metastasis (smaller cell clusters). Therefore, both systems may not completely relate to each other, and further investigation is needed to understand the collective cell migration in physiological scenarios. In an effort to fill this existing knowledge gap, we investigated the freely expanding monolayer that closely represented the physiological scenarios and compared it with the artificially created model wound. In the present work, we report the effect of initial boundary conditions (free and confined) on the collective cell migration of the epithelial cell monolayer. The expansion and migration aspects of the freely expanding and earlier-confined monolayer were investigated at the tissue and cellular levels. The freely expanding monolayer showed significantly higher expansion and lower migration in comparison to the earlier-confined monolayer. The expansion and migration rate of the monolayer exhibited a strong negative correlation. The study highlights the importance of initial boundary conditions in the collective cell migration of the expanding tissue and provides useful insights that might be helpful in the future to tune the collective cell migration in wound healing, cancer metastasis, and tissue formation.
Collective cell migration
is a fundamental multicellular activity
involved in several biological processes such as embryonic development,
tissue regeneration, wound healing, and cancer metastasis.[1−4] Therefore, it is important to understand the mechanism responsible
for collective cell migration. However, the mechanism of single-cell
migration is well known, where a cell migrates by forming new focal
adhesion in the front, followed by the retraction and detachment of
the focal adhesion from the rear end. However, the mechanism of collective
cell migration cannot be explained as a large number of single cells
migrate in a similar direction with a constant rate, without considering
the intercellular interactions.[5] These
intercellular interactions occur due to the physical connectivity
between the cells via cell–cell junctions and the actin cytoskeleton.[6] Thereby, the motion of each cell is affected
by its neighboring cell.[7,8] Despite being caged,
the collective cell migration is more efficient than single-cell migration
due to their intercellular forces.[6] This
indicates the vital role of intercellular forces in collective cell
migration.[9]Earlier, it was assumed
that the monolayer migrates due to the
active pulling generated by the leader cells located at the margin,
and follower cells passively follow them.[10−13] Contrary to the earlier assumption,
the measurement of intercellular forces showed that the leader cell
generates a pull of ∼100 nN, which is insufficient to pull
the complete monolayer.[5,14] Hence, the leader cells need
the assistance of the follower cells. Later, many studies have indicated
the active role of follower cells in collective cell migration.[15−19] These studies experimentally demonstrated the presence of the significant
amount of traction force up to ∼10 cell rows from the leading
edge,[15] propagation of slow mechanical
wave via monolayer,[16] presence of correlated
velocity field up to ∼10 to 15 cell rows,[17] strong alignment of principle stress with velocity field,[18] and mechanical interaction among the follower
cells cause the emergence of leader cells.[19] Apart from these studies, the presence of “cryptic”
cell groups in the submarginal region has also been reported.[20] The lamellipodia of these cryptic cells penetrate
the basal region of their front cells. It was assumed that these groups
of cryptic cells might contribute to the collective cell migration.[20] Despite such extensive research on collective
cell migration, the underlying mechanism through which a large number
of cells move together as a sheet is not well understood.Most
of the experimental studies done on collective cell migration
use artificial model wound,[12,17,19,21,22] where the cells were grown inside a culture insert of a fixed shape
and the insert was removed after the formation of a fully confluent
monolayer. The removal of this insert or physical barrier provides
the free space, enough to trigger the collective cell migration.[12] Thereby, the cells migrate rapidly toward the
newly available free space.[12,19,22,23] Moreover, it has been experimentally
demonstrated that cell number density determines the velocity of the
cells in the monolayer.[22] Therefore, high
collective cell migration observed in earlier-confined monolayers
could be due to their initial high cell number density. However, in
physiological scenarios like free tissue expansion, wound repair,
or cancer metastasis, the cell number density is relatively less compared
to the artificially formed (or earlier-confined) monolayer. This implies
that both types of monolayer may have distinct properties. Therefore,
further investigation is needed to understand the similarity and differences
between both types of monolayers.Hence, we compared the leading
site of the freely expanding and
earlier-confined confluent Madin-Darby Canine Kidney (MDCK) cell monolayer.
The freely expanding and earlier-confined monolayers were formed using
free and fixed boundary conditions, respectively. For both types of
the monolayer, the expansion and migration aspects were compared at
the tissue and cellular level. Here, we report that cells of the submarginal
region of the freely expanding monolayer expand at a higher rate and
migrate at a slower rate than the earlier-confined monolayer. It was
observed that most of the cells of the freely expanding monolayer
grow or expand in their area. Therefore, these types of monolayers
were referred to as the growth-dominant monolayer (GDM). In contrast,
the majority of cells of the earlier-confined monolayers prefer to
migrate. Thereby, these monolayers were referred to as the migration-dominant
monolayer (MDM). The MDM is the artificial model wound discussed in
the literature.[12,17,19,21,22] Finally, we
aimed to decipher the mechanism by which the leader and follower cells
coordinate to achieve collective cell migration. To the best of our
knowledge, this work has not been reported earlier.
Result and Discussion
In this work, the monolayer has been classified into two categories
depending on the characteristics of its constituent cells. The first
type is GDM (Figure A), which contains the majority of cells that prefer to expand (or
grow) in the area. The second is MDM (Figure B), which consists of the majority of cells
that prefer to migrate. The leading site of the GDM and MDM was compared
to find the basic difference between their mode of expansion and migration.
Figure 1
Schematic
representation of the monolayer formation. (A) GDM, (B)
MDM.
Schematic
representation of the monolayer formation. (A) GDM, (B)
MDM.
Temporal Area Expansion
The area
of the monolayer was
calculated by adding the area of all the cells of the leading site
that remained in the frame throughout the observation. Since it was
found that many cells randomly expand with time resulting in the expansion
of the monolayer, this monolayer expansion was measured by subtracting
the final area of the monolayer from its initial area. Further, the
expansion rate was obtained by dividing the monolayer expansion with
its original area and the time during which expansion took place.
The expansion rate for GDM decreased slowly with time (Figure A). It suggests that initially,
more cells were expanding, but this number later decreased with time.
Bindschadler and McGrath[25] showed that
the cell divisions significantly reduce with the increase in the confluency
of the monolayer. We assumed that the cell number density of the confluent
monolayer almost remains constant during the observation. It implies
that the rate of cell expansion remains much greater than the rate
of cell division. Since the randomly growing cells of GDM expand at
different rates and for different durations, we assumed that many
of these cells might not grow further after achieving a certain area.
Thereby, the number of growing cells may decrease with time. As a
result, the expansion rate of GDM reduces with time.
Figure 2
Comparing the expansion
of GDM and MDM. (A) Average expansion rate
versus time, (B) average number of cells, (C) average cell area versus
time, (D) representation of the number of cells with respect to change
in their effective cell radius. Note: The black asterisk in (A–C)
represents statistical significance obtained by applying an unpaired t-test between corresponding rows of GDM and MDM. The red
asterisk in (A) represents statistical significance obtained by applying
a paired t-test between the expansion rates of the
same monolayer at a different time point. The black asterisk in (D)
represents statistical significance obtained by applying an unpaired t-test between the similar effective cell radius of GDM
and MDM. Standard errors plotted here are obtained from 5 independent
experiments. The significant differences were determined by p-values, where *, **, and *** represents the significance
level of p < 0.05, p < 0.01,
and p < 0.001, respectively.
Comparing the expansion
of GDM and MDM. (A) Average expansion rate
versus time, (B) average number of cells, (C) average cell area versus
time, (D) representation of the number of cells with respect to change
in their effective cell radius. Note: The black asterisk in (A–C)
represents statistical significance obtained by applying an unpaired t-test between corresponding rows of GDM and MDM. The red
asterisk in (A) represents statistical significance obtained by applying
a paired t-test between the expansion rates of the
same monolayer at a different time point. The black asterisk in (D)
represents statistical significance obtained by applying an unpaired t-test between the similar effective cell radius of GDM
and MDM. Standard errors plotted here are obtained from 5 independent
experiments. The significant differences were determined by p-values, where *, **, and *** represents the significance
level of p < 0.05, p < 0.01,
and p < 0.001, respectively.For MDM, the expansion rate decreased rapidly from 1st to 3rd hour
(Figure A) that may
be attributed to high cell number density. Analyzing step by step,
the expansion rate for the 1st hour of MDM was more than that of GDM
(Figure A). It implies
that the cells of MDM initially expanded more as compared to the GDM.
Later, the expansion rate fell sharply from the 2nd to 3rd hour (Figure A). The negative
expansion rate was recorded in this duration, suggesting that many
cells started to shrink in their area. The plausible mechanism to
explain the negative expansion is that the high initial expansion
rate observed in the 1st hour due to expansion of submarginal cells
may apply the necessary push toward the marginal cells, resulting
in the transformation of few marginal cells into leader cells. These
newly formed leader cells invade the free space and start pulling
densely packed follower cells. As a result, the submarginal cells
shrink in their size by minimizing the number of focal adhesion in
order to rapidly migrate toward the leader cells and relieve the stress
in the submarginal region associated with their dense packing. Therefore,
the difference in the expansion rate with time for GDM and MDM could
be attributed to the difference in their cell number density per unit
area.The t-test showed that the expansion
rate of the
2nd hour was statistically significant (p = 0.0012)
to the expansion rate of the 3rd hour (marked by the red asterisk
in Figure A). The t-test applied between the GDM and MDM at the corresponding
time interval showed that their expansion rate was statistically significant
(p = 0.0055) at the 3rd hour (marked by the black
asterisk in Figure A). Further, the expansion rate of MDM increased from 3rd to 4th
hour. It suggests that many cells of the leading site started to expand
in this duration. It may happen because the initial effect of high
cell number density is over or earlier recruited leader cells stopped
working, and submarginal cells start to expand again to push and recruit
new leader cells. The t-test also showed that the
expansion rate of GDM and MDM was statistically significant (p = 0.0357) at the 4th hour. Taking the time average of
five independent experiments, the expansion rates of GDM and MDM were
0.058 ± 0.005 and 0.036 ± 0.006 μm2/h,
respectively (Figure S1A). The expansion
rate of GDM showed a statistically significant (p = 0.0285) difference from MDM.The GDM and MDM contained 81
± 7 cells and 110 ± 15 cells
at their leading site, respectively (Figure B). The number of cells at the leading site
for GDM and MDM were significantly different (p =
0.0090). It implies that the average area of GDM should be more than
that of MDM. It was found that throughout the experimental observation,
the average cell area of GDM remained higher than that of MDM. At
each time point, the average cell area of GDM was statistically significant
(p < 0.05) to the MDM. The average cell area of
GDM keeps on increasing with time (Figure C). It suggests that the majority of cells
of GDM increased in their area with time, whereas the average area
of the MDM increased up to 2 h, followed by the decrease and so on
(Figure C). It suggests
that the cells may expand and shrink at a different time interval.
The expansion rate of MDM exhibited the wave pattern that could be
seen as an indicator of collective cell migration.Then, the
change in the effective radius (ΔRE) was measured for all the cells with time.where ΔRE is the change in the cell effective radius
and AF and AI represents the final
and initial cell area, respectively.For GDM and MDM, the number
of cells exhibited a change in their
cell effective radius, as shown by the bar graph (Figure D). It was found that 67% of
GDM and 89% of MDM cells had undergone a small change in their effective
radius (ΔRE < 1.5). However,
the remaining 33% of GDM and 11% of MDM cells had undergone a large
change in their effective radius (ΔRE > 1.5). It shows that many cells of GDM can undergo a huge change
in their effective cell radius compared to the cells of the MDM.
Migration of GDM and MDM with Time
At the leading site
of the monolayer, the GDM and MDM have a cell number density of ∼3094
and ∼4055 cells/mm2, respectively. For GDM and MDM,
cell migration analysis was done by tracking the cell center with
time. The coordinates of the cell geometric center stored in the excel
sheet were imported in a MATLAB code to mark the cell center (red
dot) in the image sequence (Figure A,B). Then, the MTrackJ plug-in of ImageJ was used
to track the center for each cell throughout the image sequence. The
trajectory of cell centers exhibited directed migration toward the
leading edge (Figure A,B). However, within the same time span, the trajectories of cell
centers for GDM (Figure A) were smaller than the MDM (Figure B). It indicates that the cells of GDM migrated less
than the MDM. Similarly, the velocity field obtained by the change
in the cell’s geometric coordinates showed that the cells of
GDM (Figure C) exhibited
less coordinated motion compared to MDM (Figure D). The above results confirm that less and
highly coordinated collective cell migration was found in GDM and
MDM, respectively (Movie S1). The high
cell number density of the MDM could be responsible for its highly
coordinated collective cell migration. Further, the mean square displacement
(MSD) was obtained from the geometric coordinates of the cells and
plotted against time. The slope of the MSD versus time for the monolayer
was greater than 1, which implies that cells at the leading site exhibit
superdiffusive behavior. Nava-Sedeño et al.[26] also demonstrated that for the directed cell trajectory,
the MSD versus time graph shows the superdiffusive trend. Since the
trajectories of the vertices for the GDM were less directed and shorter
(Figure A) as compared
to MDM (Figure B),
therefore, the GDM exhibited a less superdiffusive trend compared
to MDM (Figure E).
Figure 3
Comparison
of migration between GDM and MDM. (A) Tracking of the
cell center in GDM, (B) tracking of the cell center in MDM, (C) velocity
field of GDM, (D) velocity field of MDM, (E) MSD as a function of
time for GDM and MDM, (F) average migration rate versus time for GDM
and MDM. Note: MSD vs time plot in (E) and standard errors in (F)
are obtained from 5 independent experiments. The black asterisk represents
statistical significance obtained by applying an unpaired t-test between corresponding rows of GDM and MDM. The significant
differences were determined by p-values, where *
and ** represent the significance level of p <
0.05 and p < 0.01, respectively.
Comparison
of migration between GDM and MDM. (A) Tracking of the
cell center in GDM, (B) tracking of the cell center in MDM, (C) velocity
field of GDM, (D) velocity field of MDM, (E) MSD as a function of
time for GDM and MDM, (F) average migration rate versus time for GDM
and MDM. Note: MSD vs time plot in (E) and standard errors in (F)
are obtained from 5 independent experiments. The black asterisk represents
statistical significance obtained by applying an unpaired t-test between corresponding rows of GDM and MDM. The significant
differences were determined by p-values, where *
and ** represent the significance level of p <
0.05 and p < 0.01, respectively.The migration rate or velocities of the cells were measured
by
dividing the change in the cell geometric center by the time in which
the change has occurred. The migration rate of the monolayer was calculated
by taking the spatial average of the migration rate of cells present
at the leading site. It was observed that at every time step, the
migration rate of MDM was more than that of GDM (Figure F). The migration rate of the
MDM was statistically significant (p < 0.05) to
GDM throughout the experimental observation. Tlili et al.[22] experimentally demonstrated that cell number
density determines the velocity of the cell in the monolayer since
the cell number density of the MDM was more than that of GDM. Thereby,
the MDM exhibited more migration rate (or velocity) than GDM (Figure F). The migration
rate of GDM remained almost constant.In contrast, the migration
rate of MDM increased sharply from 1st
hour to 3rd hour and afterward decreased slowly. It was observed that
the migration rate (Figure F) of MDM exhibited the opposite trend as that of its expansion
rate (Figure A). Comparing
the expansion and migration rate of MDM step by step, the initial
value of the expansion rate for 1st hour was high (Figure A), and the migration rate
was low (Figure F).
Then, the expansion rate fell (Figure A), and the migration rate increased (Figure F) rapidly from the 1st hour
to the 3rd hour. Further, the expansion rate (Figure A) increased, and the migration rate (Figure F) decreased from
3rd to 4th hour. By taking the temporal average of the experiments,
the average migration rate of GDM and MDM was 2.4 ± 0.4 and 5.8
± 0.8 μm/h, respectively (Figure S1B). The average migration rate of GDM was statistically significant
(p = 0.0201) to the MDM.
Cell Competition Approach
to Analyze Cells of GDM and MDM
There are two types of cell
populations observed among the cell
monolayer: (1) Winner cells and (2) Loser cells. The winner cells
gain, and loser cells decrease in their area as a result of “Cell
Competition.” As per the literature, the cells having the winner
phenotype are strong, adaptive, fast-growing, and more fit,[27−33] whereas cells having loser phenotype are weak, less active, senescence-like,
slow-growing, and less fit.[27−33] Therefore, the winner cells have a relatively more fit phenotype
compared to the loser cells.[27−32,34,35] In our analysis, the cells that grew more than or equal to 20% of
their original area in 4 h were considered a winner cell. Whereas
the cells that grew less than 20% of their original area after 4 h
were considered a loser cell.At the leading site of GDM, only
39% of cells were the winner (Figure A), but they contributed to 71% in the overall expansion
of the monolayer (Figure B). Whereas the remaining 61% of cells were losers (Figure A), and they only
contributed to 29% in the overall expansion of the monolayer (Figure B). Similarly, at
the leading site of the MDM, only 21% of cells was the winner (Figure C), but they contributed
to 53% in the overall expansion of the monolayer (Figure D), whereas the remaining 79%
of cells were losers (Figure C), and they only contributed to 47% in the overall expansion
of the monolayer (Figure D). In both types of monolayers, winner cells, despite being
less in number than that of loser cells, majorly contributed to the
overall expansion of the monolayer.
Figure 4
Distribution of population and contribution
of winner and loser
cells in the overall expansion. (A) Percentage distribution of winner
and loser cells in the overall population of the GDM, (B) percentage
contribution of the winner and loser cells in the overall expansion
of the GDM, (C) percentage distribution of winner and loser cells
in the overall population of MDM, (D) percentage contribution of winner
and loser cells in the overall expansion of MDM.
Distribution of population and contribution
of winner and loser
cells in the overall expansion. (A) Percentage distribution of winner
and loser cells in the overall population of the GDM, (B) percentage
contribution of the winner and loser cells in the overall expansion
of the GDM, (C) percentage distribution of winner and loser cells
in the overall population of MDM, (D) percentage contribution of winner
and loser cells in the overall expansion of MDM.For GDM, the net gain in the area by winner and loser cells in
4 h was 3746 ± 444 and 1465 ± 131 μm2,
respectively (Figure A). The collective expansion of winner and loser cells was statistically
significant (p = 0.0087), shown by the red asterisk
in Figure A. Whereas,
for MDM, the net gain in the area by winner and loser cells in 4 h
was 1626 ± 445 and 1225 ± 83 μm2, respectively
(Figure A). The t-test showed that for MDM, the net expansion of winner
cells was not statistically significant (p = 0.4773)
to the loser cells. However, the net expansion of winner cells of
GDM and MDM was statistically significant (p = 0.0098),
shown by the black asterisk in Figure A. The changes in the average cell area of winner and
loser cells were observed with time (Figure B). In both types of the monolayer (GDM and
MDM), the average area of the loser cell was initially more than the
winner cell. However, with time, the winner cells expanded at a higher
rate than the loser cells. Thereby, during the experiments, the average
cell area of the winner exceeded the loser cells (Figure B). Further, the expansion
rates of winner and loser cells were compared for both the monolayer.
It was found that throughout the experimental observation, the expansion
rate of the winner cells remained higher than that of the loser cells
(Figure C,D). For
GDM, the expansion rate of winner and loser cells exhibited a mirror
opposite or out-of-phase trend (Figure C). The t-test showed that at all
time points, the expansion rate of the winner cells remained statistically
significant (p < 0.05) to the loser cells. However,
for MDM, the expansion rate of the winner and loser cells exhibited
a similar or in-phase trend (Figure D). It indicates that in the case of MDM, both winner
and loser cells were expanding in a synchronized way.
Figure 5
Comparison of expansion
between winner and loser cells of GDM and
MDM. (A) Net gain in the area by winner and loser cells, (B) average
cell area versus time, (C) expansion rate of winner and loser cells
of GDM, (D) expansion rate of winner and loser cells of MDM. Note:
Standard error bars shown here are obtained from 5 independent experiments.
The significance of paired and unpaired t-test was
shown by the red and black asterisk, respectively. The significant
differences were determined by p-values, where *,
**, and *** represents the significance level of p < 0.05, p < 0.01, and p <
0.001, respectively.
Comparison of expansion
between winner and loser cells of GDM and
MDM. (A) Net gain in the area by winner and loser cells, (B) average
cell area versus time, (C) expansion rate of winner and loser cells
of GDM, (D) expansion rate of winner and loser cells of MDM. Note:
Standard error bars shown here are obtained from 5 independent experiments.
The significance of paired and unpaired t-test was
shown by the red and black asterisk, respectively. The significant
differences were determined by p-values, where *,
**, and *** represents the significance level of p < 0.05, p < 0.01, and p <
0.001, respectively.The migration aspects
of winner and loser cells were analyzed for
both types of the monolayer. The velocity fields of winner and loser
cells were highlighted with a different color to identify the difference
between their magnitude and direction. The winner cells were shown
with yellow vectors, and loser cells were marked by red vectors (Figure A,B). Unfortunately,
we observed no visual difference between the velocity vectors of winner
and loser cells in both types of the monolayer. Therefore, to understand
the difference between the migration of winner and loser cells, their
MSD was plotted as a function of time. For GDM, the loser cells exhibited
more displacement compared to the winner cells (Figure C). Whereas for MDM, both winner and loser
cells displaced at the same rate (Figure D). Later, for both the cases (GDM and MDM),
the average migration rates of winner and loser cells were plotted
as a function of time. In both cases, the value of the migration rate
of winner and loser cells was found in the same range (Figure E). Finally, the time average
of the migration rate of winner and loser cells was taken for both
cases. By applying the t-test between the migration
rate of winner and loser cells, no statistical significance (p > 0.05) was obtained for both the cases (Figure F). Although for GDM, the loser
cells displaced more than winner cells (Figure C) there was no significant difference (p > 0.05) between their temporal average migration rates
(Figure F). The possible
reason for this may be the physical connectivity of winner and loser
cells.
Figure 6
Migration of winner and loser cells for GDM and MDM. (A) Velocity
field of the winner (yellow vectors) and loser cells (red vectors)
in GDM, (B) velocity field of the winner (yellow vectors) and loser
cells (red vectors) in MDM, (C) MSD vs time graph for the winner and
loser cells of GDM, (D) MSD vs time graph for winner and loser cells
of MDM, (E) migration rate as a function of time for winner and loser
cells of GDM and MDM, (F) temporal average migration rate of winner
and loser cells of GDM and MDM.
Migration of winner and loser cells for GDM and MDM. (A) Velocity
field of the winner (yellow vectors) and loser cells (red vectors)
in GDM, (B) velocity field of the winner (yellow vectors) and loser
cells (red vectors) in MDM, (C) MSD vs time graph for the winner and
loser cells of GDM, (D) MSD vs time graph for winner and loser cells
of MDM, (E) migration rate as a function of time for winner and loser
cells of GDM and MDM, (F) temporal average migration rate of winner
and loser cells of GDM and MDM.
Row Wise Comparison between GDM and MDM
The spatial
comparison of the cell rows can indicate the hidden mechanism responsible
for the collective cell migration. Here, the cells of the monolayer
were categorized based on their position from the leading edge. The
first cell row includes all the border cells present at the leading
edge, and the second cell row includes cells that were directly attached
to the first cell row and so on. The first row cells were smaller
in height and sometimes traveled out of the fixed imaging window.
Since the cells of the first row were difficult to track, they were
excluded from our study. Since we intended to analyze the monolayer
as a function of space, the temporal averages of cells of the monolayer
were computed for each row. It was found that the average cell area
of the monolayer increased along the cell row (Figure A). The average area of GDM remained greater
than that of MDM (Figure A). The t-test applied between the corresponding
cell rows of GDM and MDM showed that for all cell rows, the average
cell area of GDM was statistically significant (p < 0.05) to the MDM, shown by the black asterisk in Figure A.
Figure 7
Spatial comparison between
GDM and MDM. (A) Average cell area vs
cell rows, (B) average cell expansion rate vs cell rows, (C) average
migration rate vs cell rows, (D) average expansion and migration rate
of GDM as a function of cell rows, (E) average expansion and migration
rate of MDM as a function of cell rows. Note: Standard error bars
shown here were obtained from 5 independent experiments. The unpaired t-test was applied between the corresponding rows of GDM
and MDM. The statistical significance of the unpaired t-test is shown by the black asterisk. The significant differences
were determined by p-values, where *, **, and ***
represents the significance level of p < 0.05, p < 0.01, and p < 0.001, respectively.
Spatial comparison between
GDM and MDM. (A) Average cell area vs
cell rows, (B) average cell expansion rate vs cell rows, (C) average
migration rate vs cell rows, (D) average expansion and migration rate
of GDM as a function of cell rows, (E) average expansion and migration
rate of MDM as a function of cell rows. Note: Standard error bars
shown here were obtained from 5 independent experiments. The unpaired t-test was applied between the corresponding rows of GDM
and MDM. The statistical significance of the unpaired t-test is shown by the black asterisk. The significant differences
were determined by p-values, where *, **, and ***
represents the significance level of p < 0.05, p < 0.01, and p < 0.001, respectively.Further, the average expansion rate of the different
cell rows
of the monolayer was measured. The average expansion rate of GDM and
MDM was plotted as a function of cell rows. It was observed that the
expansion rate exhibited the wave nature (Figure B). The wave nature may indicate the presence
of long-range cell–cell communication along the cell rows.
For the GDM, a high expansion rate was observed in the 2nd row. Although
we have excluded the first row from our analysis, however, to explain
the high growth rate observed in the 2nd row, it is assumed that the
pull generated by the leader cells found in the 1st row causes the
stretching of the cells of the 2nd row (Figure S3). Whereas moving along the cell row, there was a dip in
the expansion rate of the 3rd cell row and a rise from the 3rd to
5th cell row (Figure B). It indicates that cells of the 4th and 5th rows expanded more
than the cells of the 3rd row. The higher expansion maybe since the
4th and 5th row together contained the maximum number of growing cells.
As the expansion rate of the 4th and 5th row was more than the 3rd
row, it suggests that the expansion of the cells of these rows was
not driven by the pull generated by leader cells, since the cells
of the 4th and 5th row expanded in the sub-marginal region. Thereby,
they may have preferred to expand toward the less cell number density
(or toward the leading edge). We hypothesized that the cells expanding
in the submarginal region apply a considerable push toward the leader
cells. Further, there was a dip in the 6th row followed by a higher
expansion rate for the 7th and 8th cell rows. The trend of expansion
rate suggests that the random expansion of the submarginal cells could
be responsible for the expansion of the GDM. For MDM, large error
bars indicate no change in the expansion rate along the cell rows
(Figure B). Unlike
GDM, there was not much variation of the expansion rate along the
cell rows.The average migration rates of the cell rows were
measured. The
average migration rate of the GDM and MDM were plotted as a function
of the cell rows (Figure C). It was found that the migration rate (or velocity) of
the monolayer decay along the cell rows and is consistent with the
reported literature.[17,36,37] However, the migration rate of the MDM was higher than the migration
rate of GDM (Figure C). The high cell number density may be responsible for the high
migration rate observed in the MDM. The t-test was
applied between the corresponding cell rows of GDM, and MDM showed
that the average migration rate of front cell rows (2nd to 5th) of
GDM was statistically significant (p < 0.05) to
the MDM (Figure C).
Then, we checked for the existence of an opposite trend for expansion
(Figure A) and migration
rate (Figure F) across
the rows, as observed for the MDM with time. Hence, for both types
of the monolayer, the expansion and migration rates were compared.
Interestingly, the expansion and migration rate from 3rd to 7th cell
rows exhibited a mirror-opposite trend (Figure D,E). The expansion rate decreased with the
increase in the migration rate and vice versa. It suggests that the
row that expands more also migrates less and vice versa. The reason
for excluding the 2nd row from the analysis was that it might have
undergone the stretching due to the pull generated by the leader cells
(Figure S3). Whereas, the reason for neglecting
the values of the 8th row is because in many experiments of GDM, very
few cells of the 8th row were tracked. Finally, to establish the relation
between the expansion and migration rates, the Pearson’s correlation
coefficient was calculated. It was found that a strong negative correlation
existed between the expansion rate and the migration rate. For GDM
and MDM, the value of correlation was −0.98 and −0.77,
respectively. The strong negative correlation indicates that the expansion
rate and migration rate exhibit the opposite trend. It supports the
earlier statement that the row that expands more migrate less and
vice versa.
Cell Morphology Variation along the Cell
Rows
The cell
morphology can be used to predict its elasticity, fluidity, polarity,
and intercellular interaction with its neighbors. The cells being
active in nature can change their morphology in real-time. It was
observed that within same duration, cells of the GDM undergo minute
changes, but cells of MDM undergo huge transformation in their morphology
(Figure A). Here,
we have analyzed two parameters, namely shape index (SI) and aspect
ratio (AR), to check the change in the cell morphology along the cell
rows. The first parameter was SI, which is a dimensionless parameter
used to quantify the elastic or fluid-like behavior of the cells.
It is measured by dividing the parameters of the cell by the square
root of its area (eq ). If the SI > 3.81, the cell–cell adhesion dominates over
cortical tension. Hence, cells exhibit fluid-like behavior.[38] Here, we found that cells at the leading site
of the monolayer exhibit fluid-like behavior (SI > 3.81). The SI
of
cells reduces along the cell row (Figure B). The cells of the MDM were more fluid-like
as compared to the GDM. The t-test showed that the
SI of the 6th and 7th row of GDM was statistically significant to
the 6th and 7th row of MDM, respectively.where P is the cell parameter
and A is the cell area.
Figure 8
Morphological analysis
of GDM and MDM. (A) Change in the cell shape
with time, (B) SI as a function of the cell rows, (C) AR as a function
of the cell rows. Note: The standard error bars shown here were obtained
from 5 independent experiments. The unpaired t-test
was applied between the corresponding rows of GDM and MDM. The statistical
significance is shown by the black asterisk. The significant differences
were determined by the p-values, where * and ** represent
the significance level of p < 0.05 and p < 0.01, respectively.
Morphological analysis
of GDM and MDM. (A) Change in the cell shape
with time, (B) SI as a function of the cell rows, (C) AR as a function
of the cell rows. Note: The standard error bars shown here were obtained
from 5 independent experiments. The unpaired t-test
was applied between the corresponding rows of GDM and MDM. The statistical
significance is shown by the black asterisk. The significant differences
were determined by the p-values, where * and ** represent
the significance level of p < 0.05 and p < 0.01, respectively.Similarly, the second parameter was AR, and it is also a dimensionless
parameter used to quantify the cell shape. The ‘Fit ellipse’
was selected from the “Set Measurements” in ImageJ.
It measures the major and minor axis of the best fitting ellipse to
the cell. The major to the minor axis ratio was computed to obtain
the AR (eq ). The AR
indicates the polarity of the cell that can be linked to its motility.
For GDM, the AR decreased along the cell row. However, for MDM, the
AR remained constant from the 2nd to the 4th cell row and decreased
afterward. Upon comparing the corresponding cell rows, the AR of GDM
remains lower than that of MDM. The t-test showed
that the AR of the 5th and 6th cell row of GDM was statistically significant
to the AR of the 5th and 6th cell row of MDM. In summary, both SI
and AR indicated that cells of the MDM were more fluid-like and motile
compared to GDM.
Modes of Collective Cell Migration
The collectively
expanding cell groups were found at the leading site of the monolayer.
The procedure of identification of these groups has been discussed
in the materials and methods section. These groups were referred to
as dynamic growing cell colonies because they can change their shape
with time. Moreover, these groups can emerge at different locations
with time. To understand the function of these dynamically growing
cell colonies, these colonies were converted into static growing cell
colonies (Material and Methods section) and
then analyzed. We assumed that the dynamically growing cell colonies
also perform the same function for a short time span as discussed
here for static growing cell colonies.In order to understand
the physiological meaning of the growth for these collectively growing
cell colonies, the z-stack (Figure S2A) image analysis was performed. In this analysis, the 3D
interpretations of the 2D images were made. The static growing cell
colonies were considered for this analysis. The final image of the
experiment was selected as the reference image. All the cells of the
static growing colonies were marked by blue circles. It was found
that the remaining cells either shrink or fluctuate in the area with
time. Contrary to the expanding or growing cells, the shrinking cell
reduced in their area by the end of the experiment. Whereas the fluctuating
cell increase in area from the beginning and after a while their area
decrease till the end of the experiment (such that the net change
in its area was less than 20% of its original area). The shrinking
and the fluctuating cells were also marked in the reference image
by red and yellow circles. The regions of interest (ROI) were marked
in the reference image as “B,” “C,” and
“D.” The ROI “B” and ROI “C”
contained the majority of collectively growing cells. It was found
that at t = 0 h, the growing cells of these ROIs
were focused on both the top and bottom plane (Figure B,C). However, at t = 4
h, the growing cells remained focused on the bottom plane and went
out of focus from the top plane (Figure B,C). It suggests that the growing cells
reduced in their height (Figure S2B). It
implies that these growing (or expanding) cells were spreading with
time as they expanded in their area and reduced their height. The
collective expansion of these growing cells must push their neighboring
cells. Therefore, ROI “D” was selected to evaluate the
interface of growing cells and their neighboring cells to find the
trace of the push. The final image at t = 4 h was
selected to compare the change in height and area of the growing cells
with their neighboring cells (Figure D). It was found that on the top plane, the growing
cells were out of focus, and neighboring cells were focused (Figure D). As we know that
growing cells were out of focus from the top plane because they reduced
in height. Thereby, the neighboring cells have more height as compared
to growing cells. Interestingly, the neighboring cells either shrink
or fluctuate in their area. Therefore, we assumed that the push applied
by the expansion of the growing cells might be responsible for the
shrinkage or fluctuation of the neighboring cells (Figure S2C). So, we hypothesized that the cells of the collectively
growing cell colonies spread to push their neighboring cells toward
the leading edge. This hypothesis was used to explain the collective
cell migration of the monolayer.
Figure 9
3D interpretation of the 2D images. (A)
Final image of the experiment
is used as a reference image. The growing, shrinking, and fluctuating
cells are represented by blue, red, and yellow circles, respectively.
The ROIs “B”, “C” and “D”
are marked in the reference image, (B) zoom-in of ROI “B,”
and (C) zoom-in of ROI “C” contains the majority of
growing cells. At t = 0 h, cells are focused on both
planes. However, at t = 4 h, cells remained focused
on the bottom plane and went out of focus on the top plane. Therefore,
growing cells spread in the area by reducing in height and expanding
in the area, (D) zoom-in of ROI “D”, the growing cells
were out of focus in the top plane, whereas their neighboring cells
(shrinking and fluctuating) remained in focus. It means that neighboring
cells have more height than the growing cells. As these neighboring
cells shrink or fluctuate with time, it may result from the push applied
by the collectively growing or spreading cell colonies.
3D interpretation of the 2D images. (A)
Final image of the experiment
is used as a reference image. The growing, shrinking, and fluctuating
cells are represented by blue, red, and yellow circles, respectively.
The ROIs “B”, “C” and “D”
are marked in the reference image, (B) zoom-in of ROI “B,”
and (C) zoom-in of ROI “C” contains the majority of
growing cells. At t = 0 h, cells are focused on both
planes. However, at t = 4 h, cells remained focused
on the bottom plane and went out of focus on the top plane. Therefore,
growing cells spread in the area by reducing in height and expanding
in the area, (D) zoom-in of ROI “D”, the growing cells
were out of focus in the top plane, whereas their neighboring cells
(shrinking and fluctuating) remained in focus. It means that neighboring
cells have more height than the growing cells. As these neighboring
cells shrink or fluctuate with time, it may result from the push applied
by the collectively growing or spreading cell colonies.In GDM, the growing cell colonies found in the submarginal
region
expand at a higher rate compared to its neighboring cells. Thereby,
the differential growth rate causes the formation of localized mechanical
stress in the tissue.[39] We assumed that
some of the marginal cells get recruited as leader cells (Figure S3A) to relieve this localized mechanical
stress. The leader cells start to pull their immediate follower cells
of the 2nd row attached to it and cause them to stretch. Thereby,
the cells of the 2nd row connected to the leader cells rapidly increase
in their area with time (Figure S3B). It
may be the reason for the high expansion rate observed in the 2nd
row of the GDM (Figure B). Toward the monolayer center, a less expansion rate was observed
in the cells of the 3rd row. However, a high expansion rate was observed
in the 4th and 5th cell rows, as these rows contained the maximum
number of growing cells. Since the expansion rate of the 4th and 5th
row was higher than the 3rd row, it also indicates that the cells
of the growing colonies were spreading by themselves and not getting
stretched by the pull applied by the leader cells. As discussed earlier,
we assumed that these growing cell colonies push and displace their
front cell rows toward the leader cells. Thereby, high collective
cell alignment was observed in the front cell rows (Figure S4A). Superimposing the initial and final location
of growing cell colonies showed that the growing cell colonies prefer
to expand toward the leader cells (Figure S4B). Therefore, we assumed that the push applied by the growing cell
colonies act in the same direction in which the leader cells were
pulling their immediate cell rows. Hence, both the forces work together
to displace the front cell rows toward the leader cells. As these
dynamically growing cell colonies emerge at different locations with
time (Figure A–D),
they can efficiently support the migration of the leader cell to regulate
the expansion of the tissue. For GDM, the velocity field of the cells
moved in the outward direction (Figure E–H). However, highly aligned velocity
vectors were spotted just behind the leader cells (Figures F–H, and S4A, shown by the blue color ellipse).
Figure 10
Dynamically
growing cell colonies and the velocity field of GDM.
The growing cell colonies found in (A) 1st h, (B) 2nd h, (C) 3rd h,
and (D) 4th h. The velocity field of (E) 1st h, (F) 2nd h, (G) 3rd
h, and (H) 4th h. Note: The growing cell colonies are represented
by blue color and yellow outline. The blue ellipse shows the region
of high collective cell alignment, and the red arrow represents the
direction of motion of the leader cell.
Dynamically
growing cell colonies and the velocity field of GDM.
The growing cell colonies found in (A) 1st h, (B) 2nd h, (C) 3rd h,
and (D) 4th h. The velocity field of (E) 1st h, (F) 2nd h, (G) 3rd
h, and (H) 4th h. Note: The growing cell colonies are represented
by blue color and yellow outline. The blue ellipse shows the region
of high collective cell alignment, and the red arrow represents the
direction of motion of the leader cell.In the case of MDM, it was formed by the growing large number of
cells in a finite space by placing a physical barrier. The removal
of the physical barrier leads to the availability of free space, and
the cells of the monolayer exhibit collective motility toward the
free space.[12,19,22,23] Vishwakarma et al.[19] showed in their study that the first leader cell emerged after 3
h. In our case, the experiment was performed after 2 h of removal
of the culture insert. The large growing cell colonies were observed
in the 1st hour (Figure A), since we assumed that the growing (or winner) cells expand
more and migrate less. Therefore, in the 1st hour, very small magnitudes
of velocity vectors were observed behind the front cell rows (the
region indicated with an orange ellipse, Figure E), supporting the hypothesis that the push
generated by the growing cell colonies might recruit some of the marginal
cells as leader cells. Then, these newly formed leader cells begin
to pull the follower cells. Due to the presence of high cell number
density, the cells begin to exhibit collective cell migration, region
indicated by a blue ellipse (Figure F,G), and growing cell colonies start to disappear
(Figure B,C) from
the 1st hour to the 3rd hour. It may be the reason for the decrease
in expansion rate (Figure A) and an increase in the migration rate (Figure F) from 1st to 3rd hour. Petitjean
et al.[17] also showed that after 4 h of
removing the physical barrier, the migration rate increases with time.
Tlili et al.[22] claimed that the velocity
of the cells of the monolayer depends upon cell number density and
is independent of its distance from the leading edge. Later, in our
experiments, the growing cell colonies emerge again in the 4th hour
(Figure D) maybe
because the initial effect of high cell number density reduce or old
leader cells become ineffective and newly formed growing cell colonies
push the front cell rows to recruit new leader cell to maintain the
collective cell migration of the monolayer (Figure H).
Figure 11
Dynamically growing cell colonies and
velocity field in MDM. The
growing cell colonies in (A) 1st h, (B) 2nd h, (C) 3rd h, and (D)
4th hr. The velocity field in (E) 1st h, (F) 2nd h, (G) 3rd h, and
(H) 4th hr. Note: The growing cell colonies are represented by blue
color and yellow outline. The orange ellipse in (E) encloses the region
having small magnitude vectors. The blue ellipse in (F–H) encloses
the region showing high collective cell migration.
Dynamically growing cell colonies and
velocity field in MDM. The
growing cell colonies in (A) 1st h, (B) 2nd h, (C) 3rd h, and (D)
4th hr. The velocity field in (E) 1st h, (F) 2nd h, (G) 3rd h, and
(H) 4th hr. Note: The growing cell colonies are represented by blue
color and yellow outline. The orange ellipse in (E) encloses the region
having small magnitude vectors. The blue ellipse in (F–H) encloses
the region showing high collective cell migration.The distinct modes of collective cell migration observed
in this
work can be possibly explained by considering intercellular social
interactions such as local alignment (LA) and contact inhibiting locomotion
(CIL). Recent studies showed that the trade-off between LA and CIL
could be responsible for modes of collective cell migration.[40−42] The coordination between LA and CIL may dictate giant density fluctuation,
leading to phase separation in the monolayer.[40,41,43] In our study, the cells of the colonies
grow at a higher rate compared to their surrounding tissue. It can
be considered as phase separation. The literature suggests that translation
motion occurs when LA dominates the CIL and cage-relative motion when
CIL dominates LA.[40,41] The high MSD observed for the
surrounding tissue compared to the colonies (Figure C) in our study may be possibly attributed
to CIL dominance in colonies and LA in the surrounding tissue, suggesting
cage-relative motion of cells in colonies and translational motion
of cells in the surrounding tissue. For GDM, the colonies were observed
throughout the experiment, suggesting that the combined effects of
the cage-relative motion and translation motion might be responsible
for a less degree of collective cell migration (Figure ). Whereas in MDM, the colonies
were present initially (1st hour), and a less degree of collective
cell migration was observed in that duration (Figure A,E). However, after the formation of the
leader cells, this monolayer behaved differently to GDM, which might
be associated with the difference in their cell number density. In
this case (MDM), the shrinking of submarginal cells was observed from
the 2nd to 3rd hour, which might have helped the cells migrate effectively
by minimizing their focal adhesions and resulting in the disappearance
of colonies in this duration (Figure B,C). Therefore, the phase separation may cease to
exist at this stage, and LA began to dominate in the monolayer. This
may be the possible reason for the synchronized and directional motion
of the submarginal cells toward the free space resulting in rapid
collective cell migration (Figure F,G). It may ease the effect of high cell number density
at later stages, and colonies start to appear again with time (Figure D).
Conclusions
In the present work, we investigated two types of monolayer formed
by using initially free (GDM) and confined (MDM) boundary conditions.
A distinct mode of tissue expansion and collective cell migration
was observed in the MDM and GDM. The GDM showed significantly more
expansion compared to the MDM. The winner and loser population was
identified in both the monolayer. Despite being less in number, winner
cells majorly contributed to the expansion of the monolayer, indicating
the relatively fit phenotype of the winner cells. The opposite trends
of the expansion rate for winner and loser cells suggested that the
idea of cell competition was more relevant in the case of GDM. In
contrast, the similar trends of the expansion rate and identical slopes
of MSD versus time for the winner and loser cells can be linked to
the high collective cell migration observed in MDM. It has been shown
that the GDM having less cell number density exhibited slow and less
aligned collective cell migration, whereas rapid and highly aligned
collective cell migration was observed in MDM having high cell number
density, revealing a fundamental link between the cell number density
and collective cell migration of the expanding monolayer. In physiological
scenarios such as wound healing and cancer metastasis, the cell number
density is relatively low compared to the extensively investigated
artificial wound model (MDM). Therefore, GDM closely resembles these
physiological scenarios. This study provides useful insights into
the collective cell migration in physiological conditions that are
expected to be used in the future to design a better system that can
tune the collective cell migration in wounds, cancer metastasis, and
other biological processes.
Materials and Methods
Cell Culture Protocol
The live-cell experiments were
performed with MDCK II cells, stably transfected
with Green Florescent Protein E-Cadherin. The cells were cultured
in Dulbecco’s modified Eagle medium supplemented with 10% fetal
bovine serum (FBS) and 1% penicillin–streptomycin in humidified
conditions with 5% CO2 at 37 °C. The ∼70% confluent
cells were harvested by treating with the trypsin–EDTA solution
for the experiments.
Formation of GDM
The GDM was formed
by seeding the
cells (100 μL, 1,000,000 cells/mL) at the center of the 25 mm
glass coverslip (Figure A) placed inside the 35 mm tissue culture-treated polystyrene Petri
dish and kept in the incubator (37 °C and 5% CO2).
After 2 h, 2 mL of complete media was added to the Petri dish. The
cells were incubated for 48 h inside the incubator and analyzed under
the microscope. If a confluent cell monolayer was formed, then, the
coverslip was rinsed with PBS and fixed in the Attofluor cell chamber
(coverslip holder). Then, the image acquisition media (2 mL, Leibovitz-15
supplemented with 10% FBS and 1% antibiotics) was added to it. The
imaging of cells was done by using a motorized inverted microscope
(Leica DMI 6000B) integrated with a cage incubator maintained at 37
°C. After 2 h, the live-cell imaging with z-stacking
was performed at the selected location at the leading site (∼8–10
cell rows from the leading edge) by using Leica’s LAS X software,
which automatically captured the images after a fixed interval up
to 4 h. The z-stack images were merged by using the
average intensity projection method available in the software.
Formation
of MDM
It was formed by seeding the cells
(50 μL, 1,000,000 cells/mL) inside each well of the culture
insert (from ibidi) fixed on the top of the glass coverslip (Figure B) and placed inside
the 35 mm tissue culture-treated polystyrene Petri dish. The cells
were incubated and regularly analyzed under the microscope after 48
h. When a confluent cell monolayer was formed, the culture insert
was peeled off, and the coverslip was fixed in the coverslip holder.
Then, 2 mL of image acquisition was added to it, and the holder was
taken under the microscope-integrated with a cage incubator. At last,
the desired location was selected at the leading site of the monolayer
formed after the removal of the physical barrier. After 2 h, the live-cell
imaging with z-stacking was performed at this location
for 4 h. The average intensity projection method of the software was
employed to merge the z-stack images.
Image Analysis
Skeletonization
and Cell Tracking
The time-lapse image
sequences were converted into the skeletonized image with the help
of ImageJ. The image sequence was imported in ImageJ (File > Import
> Image Sequence) and converted into 8-bit images (Image > Type
>
8-bit). Then, the bandpass fast Fourier transform (FFT) filter (Process
> FFT > Bandpass Filter) was applied to the image sequence.
Further,
the image sequence was converted into a binary format (Process >
Binary
> Make Binary) by selecting the “Percentile” method
and “Dark” background. Finally, the binary images were
skeletonized (Process > Binary > Skeletonize). The cell area
tracking
was manually performed by using the “Wand (tracing) tool”
of ImageJ on skeletonized images. For the cells that were not segmented
properly, their area was measured manually using the “Polygon
selection tool” of ImageJ on the raw fluorescent images. The
change in the cell area and geometric center with time was measured
for all cells. These measurements were stored in excel sheets.
Identification
of Collectively Growing Cell Colonies
The Pearson correlation
coefficient was employed to identify the
group of cells expanding or growing together with time. It establishes
a direct relationship between two parameters (i.e., change in the
area of cell a and cell b with time). For any two connected cells
(a and b), if 70% of the time they are changing their area in the
same way (may increase, decrease, or fluctuate), then, the value of
correlation becomes 0.7, representing a strong positive correlation.Where aab denotes
the Pearson correlation coefficient between the change in the area
of the cell a and cell b, n represent the number
of time frame, and a and b represent the
area of a and b at the ith frame, respectively.Initially, all cells of the leading
site were randomly assigned with a number as their identity. Then,
the initial area (at t = 0 h) and final area (at t = 1 h) of the same cell were compared. If the cell expands
more than 5% of the initial area, it was considered a growing cell.
All growing cells were marked in the reference image (at t = 0 h). Then, the area of each cell was individually compared to
its neighboring cells for previous 1 h images. All the cells exhibiting
a strong positive correlation (aab >
0.7),
their common edges were marked in a reference image (at t = 0 h). Finally, the growing cells exhibiting strong positive correlation
were enclosed together and referred to as “Dynamically Growing
cell colonies.” Similarly, the colonies were obtained after
each hour, up to 4 h. These colonies were referred to as dynamic as
the different shapes of colonies emerged at different hours. However,
the dynamic colonies were converted into static colonies for the ease
of analysis by considering previous 4 h images for analysis (covering
the entire experimental span). For static colonies, all the cells
that expand more than 20% of their initial area were considered as
growing cells and all the growing cells that exhibited a positive
correlation (aab > 0.7) were enclosed
to form such a colony. Since it covers the entire experimental span
of 4 h, therefore, these colonies have a fixed shape. Thereby, these
colonies were named “static growing cell colonies.”The growth criteria (5% for dynamic and 20% for static cell colonies)
were selected because Zehnder et al.[24] reported
that the cell area fluctuates by ± 20% in 4 h. Therefore, cells
that grow more than 20% in 4 h were considered as growing cells during
the identification of static colonies. Accordingly, 5% growth criteria
were selected during the identification of dynamic colonies obtained
from 1 h images. These growth criteria effectively reduced the chances
of cell area fluctuations to be considered growth.
MATLAB Codes
The MSD versus time was plotted by importing
the geometric coordinates of the cells in a self-written MATLAB code.
Statistical Analysis
The normality of data was tested
by visual inspection of the histogram, normal Q–Q plots, values of kurtosis, and skewness, before applying
the t-test. The paired and unpaired t-tests were applied as suitable. The significant differences were
determined by p-values, where *, **, and *** represents
the significance level of p < 0.05, p < 0.01, and p < 0.001, respectively. The
statistical analysis was performed using Microsoft Excel (2007).
Authors: Sri Ram Krishna Vedula; Man Chun Leong; Tan Lei Lai; Pascal Hersen; Alexandre J Kabla; Chwee Teck Lim; Benoît Ladoux Journal: Proc Natl Acad Sci U S A Date: 2012-07-19 Impact factor: 11.205
Authors: Olivia du Roure; Alexandre Saez; Axel Buguin; Robert H Austin; Philippe Chavrier; Pascal Silberzan; Pascal Siberzan; Benoit Ladoux Journal: Proc Natl Acad Sci U S A Date: 2005-02-04 Impact factor: 11.205
Authors: M Poujade; E Grasland-Mongrain; A Hertzog; J Jouanneau; P Chavrier; B Ladoux; A Buguin; P Silberzan Journal: Proc Natl Acad Sci U S A Date: 2007-09-28 Impact factor: 11.205