Literature DB >> 34054575

An Interpretable Hand-Crafted Feature-Based Model for Atrial Fibrillation Detection.

Rahimeh Rouhi1, Marianne Clausel2, Julien Oster3, Fabien Lauer1.   

Abstract

Atrial Fibrillation (AF) is the most common type of cardiac arrhythmia. Early diagnosis of AF helps to improve therapy and prognosis. Machine Learning (ML) has been successfully applied to improve the effectiveness of Computer-Aided Diagnosis (CADx) systems for AF detection. Presenting an explanation for the decision made by an ML model is considerable from the cardiologists' point of view, which decreases the complexity of the ML model and can provide tangible information in their diagnosis. In this paper, a range of explanation techniques is applied to hand-crafted features based ML models for heart rhythm classification. We validate the impact of the techniques by applying feature selection and classification to the 2017 CinC/PhysioNet challenge dataset. The results show the effectiveness and efficiency of SHapley Additive exPlanations (SHAP) technique along with Random Forest (RF) for the classification of the Electrocardiogram (ECG) signals for AF detection with a mean F-score of 0.746 compared to 0.706 for a technique based on the same features based on a cascaded SVM approach. The study also highlights how this interpretable hand-crafted feature-based model can provide cardiologists with a more compact set of features and tangible information in their diagnosis.
Copyright © 2021 Rouhi, Clausel, Oster and Lauer.

Entities:  

Keywords:  atrial fibrillation; classification; computer-aided diagnosis; feature importance; feature selection; interpretability

Year:  2021        PMID: 34054575      PMCID: PMC8155476          DOI: 10.3389/fphys.2021.657304

Source DB:  PubMed          Journal:  Front Physiol        ISSN: 1664-042X            Impact factor:   4.566


  23 in total

1.  Accurate estimation of entropy in very short physiological time series: the problem of atrial fibrillation detection in implanted ventricular devices.

Authors:  Douglas E Lake; J Randall Moorman
Journal:  Am J Physiol Heart Circ Physiol       Date:  2010-10-29       Impact factor: 4.733

2.  From Local Explanations to Global Understanding with Explainable AI for Trees.

Authors:  Scott M Lundberg; Gabriel Erion; Hugh Chen; Alex DeGrave; Jordan M Prutkin; Bala Nair; Ronit Katz; Jonathan Himmelfarb; Nisha Bansal; Su-In Lee
Journal:  Nat Mach Intell       Date:  2020-01-17

3.  Abductive reasoning as a basis to reproduce expert criteria in ECG atrial fibrillation identification.

Authors:  T Teijeiro; C A García; D Castro; P Félix
Journal:  Physiol Meas       Date:  2018-08-31       Impact factor: 2.833

4.  Explainable machine-learning predictions for the prevention of hypoxaemia during surgery.

Authors:  Scott M Lundberg; Bala Nair; Monica S Vavilala; Mayumi Horibe; Michael J Eisses; Trevor Adams; David E Liston; Daniel King-Wai Low; Shu-Fang Newman; Jerry Kim; Su-In Lee
Journal:  Nat Biomed Eng       Date:  2018-10-10       Impact factor: 25.671

5.  A detector for a chronic implantable atrial tachyarrhythmia monitor.

Authors:  Shantanu Sarkar; David Ritscher; Rahul Mehra
Journal:  IEEE Trans Biomed Eng       Date:  2008-03       Impact factor: 4.538

6.  Worldwide epidemiology of atrial fibrillation: a Global Burden of Disease 2010 Study.

Authors:  Sumeet S Chugh; Rasmus Havmoeller; Kumar Narayanan; David Singh; Michiel Rienstra; Emelia J Benjamin; Richard F Gillum; Young-Hoon Kim; John H McAnulty; Zhi-Jie Zheng; Mohammad H Forouzanfar; Mohsen Naghavi; George A Mensah; Majid Ezzati; Christopher J L Murray
Journal:  Circulation       Date:  2013-12-17       Impact factor: 29.690

7.  Cost of an emerging epidemic: an economic analysis of atrial fibrillation in the UK.

Authors:  S Stewart; N F Murphy; N Murphy; A Walker; A McGuire; J J V McMurray
Journal:  Heart       Date:  2004-03       Impact factor: 5.994

8.  Gene selection and classification of microarray data using random forest.

Authors:  Ramón Díaz-Uriarte; Sara Alvarez de Andrés
Journal:  BMC Bioinformatics       Date:  2006-01-06       Impact factor: 3.169

9.  Automatic Detection of Atrial Fibrillation Based on Continuous Wavelet Transform and 2D Convolutional Neural Networks.

Authors:  Runnan He; Kuanquan Wang; Na Zhao; Yang Liu; Yongfeng Yuan; Qince Li; Henggui Zhang
Journal:  Front Physiol       Date:  2018-08-30       Impact factor: 4.566

10.  Machine learning detection of Atrial Fibrillation using wearable technology.

Authors:  Mark Lown; Michael Brown; Chloë Brown; Arthur M Yue; Benoy N Shah; Simon J Corbett; George Lewith; Beth Stuart; Michael Moore; Paul Little
Journal:  PLoS One       Date:  2020-01-24       Impact factor: 3.240

View more
  2 in total

1.  An Intelligent ECG-Based Tool for Diagnosing COVID-19 via Ensemble Deep Learning Techniques.

Authors:  Omneya Attallah
Journal:  Biosensors (Basel)       Date:  2022-05-05

2.  Atrioventricular Synchronization for Detection of Atrial Fibrillation and Flutter in One to Twelve ECG Leads Using a Dense Neural Network Classifier.

Authors:  Irena Jekova; Ivaylo Christov; Vessela Krasteva
Journal:  Sensors (Basel)       Date:  2022-08-14       Impact factor: 3.847

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.