Literature DB >> 34052955

Copy number variation sequencing combined with quantitative fluorescence polymerase chain reaction in clinical application of pregnancy loss.

Lin Chen1,2, Li Wang1,2, Feng Tang1,2, Yang Zeng1,2, Daishu Yin1,2, Cong Zhou1,2, Hongmei Zhu1,2, Linping Li1,2, Lili Zhang1,2, Jing Wang3,4.   

Abstract

PURPOSE: In this study, we evaluated the feasibility of the combining CNV-seq and quantitative fluorescence polymerase chain reaction (QF-PCR) for miscarriage analysis in clinical practice.
METHODS: Over a 35-month period, a total of 389 fetal specimens including 356 chorionic villi and 33 fetal muscle tissues were analyzed by CNV-seq and QF-PCR. Relationships between the risk factors (e.g., advanced maternal age, abnormal pregnancy history, and gestational age) and incidence of these chromosomal abnormalities were further analyzed by subgroup.
RESULTS: Clinically significant chromosomal abnormalities were identified in 58.95% cases. Aneuploidy was the most common abnormality (46.84%), followed by polyploidy (8.16%) and structural chromosome anomalies (3.95%). In sub-group analysis, significant differences were found in the total frequency of chromosomal abnormalities between the early abortion and the late abortion group, as well as in the distribution of chromosomal abnormalities between the advanced and the younger maternal age group. Meanwhile, the results of the logistic regression analysis identified a trend suggesting that the percentage of fetal chromosomal abnormalities is significantly higher in advanced maternal age, lesser gestational age, and lesser number of prior miscarriages.
CONCLUSION: Our study suggests that CNV-seq and QF-PCR are efficient and reliable technologies in the fetal chromosome analysis of miscarriages and could be used as a routine selection method for the genetic analysis of spontaneous abortion.
© 2021. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  CNV-seq; Chromosome aberrations; Copy number variation; Pregnancy loss; QF-PCR

Mesh:

Year:  2021        PMID: 34052955      PMCID: PMC8490602          DOI: 10.1007/s10815-021-02243-9

Source DB:  PubMed          Journal:  J Assist Reprod Genet        ISSN: 1058-0468            Impact factor:   3.357


  43 in total

1.  Cost-effectiveness of cytogenetic evaluation of products of conception by chorionic villus sampling in recurrent miscarriage.

Authors:  Florencia Petracchi; Cecilia Paez; Laura Igarzabal
Journal:  Prenat Diagn       Date:  2017-02-10       Impact factor: 3.050

Review 2.  Before the beginning: the genetic risk of a couple aiming to conceive.

Authors:  Joe Leigh Simpson; Svetlana Rechitsky; Anver Kuliev
Journal:  Fertil Steril       Date:  2019-10       Impact factor: 7.329

3.  Maternal age, history of miscarriage, and embryonic/fetal size are associated with cytogenetic results of spontaneous early miscarriages.

Authors:  Nobuaki Ozawa; Kohei Ogawa; Aiko Sasaki; Mari Mitsui; Seiji Wada; Haruhiko Sago
Journal:  J Assist Reprod Genet       Date:  2019-02-09       Impact factor: 3.412

Review 4.  Recurrent reciprocal copy number variants: Roles and rules in neurodevelopmental disorders.

Authors:  Aditi Deshpande; Lauren A Weiss
Journal:  Dev Neurobiol       Date:  2018-03-25       Impact factor: 3.964

5.  Traditional karyotyping vs copy number variation sequencing for detection of chromosomal abnormalities associated with spontaneous miscarriage.

Authors:  S Liu; L Song; D S Cram; L Xiong; K Wang; R Wu; J Liu; K Deng; B Jia; M Zhong; F Yang
Journal:  Ultrasound Obstet Gynecol       Date:  2015-10       Impact factor: 7.299

6.  Risk factors for miscarriage among women attending an early pregnancy assessment unit (EPAU): a prospective cohort study.

Authors:  Indra San Lazaro Campillo; Sarah Meaney; Paul Corcoran; Niamh Spillane; Keelin O'Donoghue
Journal:  Ir J Med Sci       Date:  2019-01-03       Impact factor: 1.568

7.  Identification of copy number variations among fetuses with ultrasound soft markers using next-generation sequencing.

Authors:  Jing Wang; Lin Chen; Cong Zhou; Li Wang; Hanbing Xie; Yuanyuan Xiao; Daishu Yin; Yang Zeng; Feng Tang; Yunyuan Yang; Hongmei Zhu; Xinlian Chen; Qian Zhu; Zhiying Liu; Hongqian Liu
Journal:  Sci Rep       Date:  2018-05-25       Impact factor: 4.379

8.  Low-pass whole-genome sequencing in clinical cytogenetics: a validated approach.

Authors:  Zirui Dong; Jun Zhang; Ping Hu; Haixiao Chen; Jinjin Xu; Qi Tian; Lu Meng; Yanchou Ye; Jun Wang; Meiyan Zhang; Yun Li; Huilin Wang; Shanshan Yu; Fang Chen; Jiansheng Xie; Hui Jiang; Wei Wang; Kwong Wai Choy; Zhengfeng Xu
Journal:  Genet Med       Date:  2016-01-28       Impact factor: 8.822

9.  Chromosomal copy number analysis on chorionic villus samples from early spontaneous miscarriages by high throughput genetic technology.

Authors:  Jiandong Shen; Wei Wu; Chao Gao; Humphrey Ochin; Dianyun Qu; Jiazi Xie; Li Gao; Yadong Zhou; Yugui Cui; Jiayin Liu
Journal:  Mol Cytogenet       Date:  2016-01-26       Impact factor: 2.009

Review 10.  Impact of Maternal Age on Oocyte and Embryo Competence.

Authors:  Danilo Cimadomo; Gemma Fabozzi; Alberto Vaiarelli; Nicolò Ubaldi; Filippo Maria Ubaldi; Laura Rienzi
Journal:  Front Endocrinol (Lausanne)       Date:  2018-06-29       Impact factor: 5.555

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