Literature DB >> 34051145

Resolving cellular and molecular diversity along the hippocampal anterior-to-posterior axis in humans.

Fatma Ayhan1, Ashwinikumar Kulkarni1, Stefano Berto1, Karthigayini Sivaprakasam1, Connor Douglas1, Bradley C Lega2, Genevieve Konopka3.   

Abstract

The hippocampus supports many facets of cognition, including learning, memory, and emotional processing. Anatomically, the hippocampus runs along a longitudinal axis, posterior to anterior in primates. The structure, function, and connectivity of the hippocampus vary along this axis. In human hippocampus, longitudinal functional heterogeneity remains an active area of investigation, and structural heterogeneity has not been described. To understand the cellular and molecular diversity along the hippocampal long axis in human brain and define molecular signatures corresponding to functional domains, we performed single-nuclei RNA sequencing on surgically resected human anterior and posterior hippocampus from epilepsy patients, identifying differentially expressed genes at cellular resolution. We further identify axis- and cell-type-specific gene expression signatures that differentially intersect with human genetic signals, identifying cell-type-specific genes in the posterior hippocampus for cognitive function and the anterior hippocampus for mood and affect. These data are accessible as a public resource through an interactive website.
Copyright © 2021 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  hippocampus, single-cell genomics, cognition, memory, neurogenomics

Mesh:

Year:  2021        PMID: 34051145      PMCID: PMC8273123          DOI: 10.1016/j.neuron.2021.05.003

Source DB:  PubMed          Journal:  Neuron        ISSN: 0896-6273            Impact factor:   18.688


  97 in total

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  11 in total

1.  Transcriptomic taxonomy and neurogenic trajectories of adult human, macaque, and pig hippocampal and entorhinal cells.

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Journal:  Neuron       Date:  2021-11-18       Impact factor: 17.173

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4.  Molecular landscapes of human hippocampal immature neurons across lifespan.

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5.  Polygenic enrichment distinguishes disease associations of individual cells in single-cell RNA-seq data.

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6.  Impact of neurodegenerative diseases on human adult hippocampal neurogenesis.

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Review 7.  Single-Cell and Single-Nucleus RNAseq Analysis of Adult Neurogenesis.

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Journal:  Cells       Date:  2022-05-13       Impact factor: 7.666

8.  Microglia phenotypes are associated with subregional patterns of concomitant tau, amyloid-β and α-synuclein pathologies in the hippocampus of patients with Alzheimer's disease and dementia with Lewy bodies.

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10.  Nuclei isolation from surgically resected human hippocampus.

Authors:  Fatma Ayhan; Connor Douglas; Bradley C Lega; Genevieve Konopka
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