Literature DB >> 34046767

Screening and testing potential inhibitors of sulphide gas production by sulphate-reducing bacteria.

Elias Silva Dos Santos1, Joalene de Azevedo Santos Ferreira2, Jacson Nunes Dos Santos2, Fábio Alexandre Chinalia2, Josilene Lima Matos2, Gustavo Coqueiro2, Elias Ramos-de-Souza3, Paulo Fernando de Almeida2.   

Abstract

Sulphate-reducing bacteria are commonly associated with biological causes of oil well souring. Biosulphetogenesis can directly affect oil quality and storage due to the accumulation of sulphides. In addition, these microorganisms can create bio-incrustation that can clog pipes. Sulphite reductase (SIR) is the enzyme responsible for converting ion sulphite into sulphide and several substances may interfere or control such activity. This interference can hinder growth of the sulphate-reducing bacteria and, consequently, it reduces sulphide accumulation in situ. This work focuses on molecular modelling techniques along with in vitro experiments in order to investigate the potential of two essential oils and one vegetable oil as main inhibitors of sulphite reductase activity. Docking simulation identified several substances present in Rosmarinus officinalis, Tea tree and Neem extractable oils as potential inhibitors of SIR. Substances present in Neem vegetable oil are the most potent inhibitors, followed by Rosmarinus officinalis and Tea tree essential oils. The Neem oil mixture showed a superior effectiveness in intracellular SIR inhibitory effects.

Entities:  

Keywords:  Docking; Essential oil; Sulphate-reducing bacteria; Sulphetogenesis; Sulphite reductase

Mesh:

Substances:

Year:  2021        PMID: 34046767     DOI: 10.1007/s00894-021-04801-5

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  25 in total

1.  A NEW SPECIES OF DESULFOVIBRIO.

Authors:  J LEGALL
Journal:  J Bacteriol       Date:  1963-11       Impact factor: 3.490

2.  Essential oils composition in two Rosmarinus officinalis L. varieties and incidence for antimicrobial and antioxidant activities.

Authors:  Yosr Zaouali; Taroub Bouzaine; Mohamed Boussaid
Journal:  Food Chem Toxicol       Date:  2010-08-20       Impact factor: 6.023

3.  Protein structure homology modeling using SWISS-MODEL workspace.

Authors:  Lorenza Bordoli; Florian Kiefer; Konstantin Arnold; Pascal Benkert; James Battey; Torsten Schwede
Journal:  Nat Protoc       Date:  2009       Impact factor: 13.491

4.  Novel potential inhibitors for adenylylsulfate reductase to control souring of water in oil industries.

Authors:  Elias Silva Dos Santos; Leila Cristiane Virgens de Souza; Patrícia Nascimento de Assis; Paulo Fernando Almeida; Elias Ramos-de-Souza
Journal:  J Biomol Struct Dyn       Date:  2013-09-13

5.  Souring control in fluid samples of oil industry using a multiple ligand simultaneous docking (MLSD) strategy.

Authors:  Elias Silva dos Santos; Leila Cristiane Virgens de Souza; Patrícia Nascimento de Assis; Paulo Fernando de Almeida; Elias Ramos-de-Souza
Journal:  J Biomol Struct Dyn       Date:  2014-07-22

6.  Terpinen-4-ol, the main component of the essential oil of Melaleuca alternifolia (tea tree oil), suppresses inflammatory mediator production by activated human monocytes.

Authors:  P H Hart; C Brand; C F Carson; T V Riley; R H Prager; J J Finlay-Jones
Journal:  Inflamm Res       Date:  2000-11       Impact factor: 4.575

Review 7.  Biological souring and mitigation in oil reservoirs.

Authors:  Lisa M Gieg; Tom R Jack; Julia M Foght
Journal:  Appl Microbiol Biotechnol       Date:  2011-08-20       Impact factor: 4.813

8.  Effects of tea tree (Melaleuca alternifolia) oil on Staphylococcus aureus in biofilms and stationary growth phase.

Authors:  Jakub Kwieciński; Sigrun Eick; Kinga Wójcik
Journal:  Int J Antimicrob Agents       Date:  2008-12-17       Impact factor: 5.283

9.  Microcalorimetric studies of the growth of sulfate-reducing bacteria: comparison of the growth parameters of some Desulfovibrio species.

Authors:  A S Traore; C E Hatchikian; J Le Gall; J P Belaich
Journal:  J Bacteriol       Date:  1982-02       Impact factor: 3.490

10.  1001 Ways to run AutoDock Vina for virtual screening.

Authors:  Mohammad Mahdi Jaghoori; Boris Bleijlevens; Silvia D Olabarriaga
Journal:  J Comput Aided Mol Des       Date:  2016-02-20       Impact factor: 3.686

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