Literature DB >> 34045771

Protein Interactions with Nanoparticle Surfaces: Highlighting Solution NMR Techniques.

Y Randika Perera1, Rebecca A Hill1, Nicholas C Fitzkee1.   

Abstract

In the last decade, nanoparticles (NPs) have become a key tool in medicine and biotechnology as drug delivery systems, biosensors and diagnostic devices. The composition and surface chemistry of NPs vary based on the materials used: typically organic polymers, inorganic materials, or lipids. Nanoparticle classes can be further divided into sub-categories depending on the surface modification and functionalization. These surface properties matter when NPs are introduced into a physiological environment, as they will influence how nucleic acids, lipids, and proteins will interact with the NP surface. While small-molecule interactions are easily probed using NMR spectroscopy, studying protein-NP interactions using NMR introduces several challenges. For example, globular proteins may have a perturbed conformation when attached to a foreign surface, and the size of NP-protein conjugates can lead to excessive line broadening. Many of these challenges have been addressed, and NMR spectroscopy is becoming a mature technique for in situ analysis of NP binding behavior. It is therefore not surprising that NMR has been applied to NP systems and has been used to study biomolecules on NP surfaces. Important considerations include corona composition, protein behavior, and ligand architecture. These features are difficult to resolve using classical surface and material characterization strategies, and NMR provides a complementary avenue of characterization. In this review, we examine how solution NMR can be combined with other analytical techniques to investigate protein behavior on NP surfaces.

Entities:  

Keywords:  NMR relaxation; Protein surface interactions; surface structure, biomolecular corona

Year:  2019        PMID: 34045771      PMCID: PMC8152826          DOI: 10.1002/ijch.201900080

Source DB:  PubMed          Journal:  Isr J Chem        ISSN: 0021-2148            Impact factor:   3.333


  170 in total

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Authors:  J Michael Andresen; Javier Gayán; Luc Djoussé; Simone Roberts; Denise Brocklebank; Stacey S Cherny; Lon R Cardon; James F Gusella; Marcy E MacDonald; Richard H Myers; David E Housman; Nancy S Wexler
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2.  A nano-combinatorial library strategy for the discovery of nanotubes with reduced protein-binding, cytotoxicity, and immune response.

Authors:  Hongyu Zhou; Qingxin Mu; Ningning Gao; Aifeng Liu; Yuehan Xing; Sulian Gao; Qiu Zhang; Guangbo Qu; Yuyan Chen; Gang Liu; Bin Zhang; Bing Yan
Journal:  Nano Lett       Date:  2008-02-21       Impact factor: 11.189

3.  Gold nanoparticles can induce the formation of protein-based aggregates at physiological pH.

Authors:  Dongmao Zhang; Oara Neumann; Hui Wang; Virany M Yuwono; Aoune Barhoumi; Michael Perham; Jeffrey D Hartgerink; Pernilla Wittung-Stafshede; Naomi J Halas
Journal:  Nano Lett       Date:  2009-02       Impact factor: 11.189

4.  Using hydrogen-deuterium exchange to monitor protein structure in the presence of gold nanoparticles.

Authors:  Ailin Wang; Tam Vo; Vu Le; Nicholas C Fitzkee
Journal:  J Phys Chem B       Date:  2014-10-10       Impact factor: 2.991

Review 5.  Introducing protein intrinsic disorder.

Authors:  Johnny Habchi; Peter Tompa; Sonia Longhi; Vladimir N Uversky
Journal:  Chem Rev       Date:  2014-04-17       Impact factor: 60.622

6.  Characterization of Ligand Binding by Saturation Transfer Difference NMR Spectroscopy.

Authors:  Moriz Mayer; Bernd Meyer
Journal:  Angew Chem Int Ed Engl       Date:  1999-06-14       Impact factor: 15.336

7.  Self-Assembled Gold Nanoparticle-Fluorescent Protein Conjugates as Platforms for Sensing Thiolate Compounds via Modulation of Energy Transfer Quenching.

Authors:  Anshika Kapur; Fadi Aldeek; Xin Ji; Malak Safi; Wentao Wang; Ada Del Cid; Oliver Steinbock; Hedi Mattoussi
Journal:  Bioconjug Chem       Date:  2017-01-26       Impact factor: 4.774

8.  Adsorption of bovine serum albumin on nanosized magnetic particles.

Authors:  Z G Peng; K Hidajat; M S Uddin
Journal:  J Colloid Interface Sci       Date:  2004-03-15       Impact factor: 8.128

9.  Atomic-resolution dynamics on the surface of amyloid-β protofibrils probed by solution NMR.

Authors:  Nicolas L Fawzi; Jinfa Ying; Rodolfo Ghirlando; Dennis A Torchia; G Marius Clore
Journal:  Nature       Date:  2011-10-30       Impact factor: 49.962

Review 10.  What's in a name? Why these proteins are intrinsically disordered: Why these proteins are intrinsically disordered.

Authors:  A Keith Dunker; M Madan Babu; Elisar Barbar; Martin Blackledge; Sarah E Bondos; Zsuzsanna Dosztányi; H Jane Dyson; Julie Forman-Kay; Monika Fuxreiter; Jörg Gsponer; Kyou-Hoon Han; David T Jones; Sonia Longhi; Steven J Metallo; Ken Nishikawa; Ruth Nussinov; Zoran Obradovic; Rohit V Pappu; Burkhard Rost; Philipp Selenko; Vinod Subramaniam; Joel L Sussman; Peter Tompa; Vladimir N Uversky
Journal:  Intrinsically Disord Proteins       Date:  2013-04-01
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  6 in total

1.  Quantitative Measurement of Multiprotein Nanoparticle Interactions Using NMR Spectroscopy.

Authors:  Joanna Xiuzhu Xu; Md Siddik Alom; Nicholas C Fitzkee
Journal:  Anal Chem       Date:  2021-08-25       Impact factor: 8.008

Review 2.  Solution NMR methods for structural and thermodynamic investigation of nanoparticle adsorption equilibria.

Authors:  Yeongseo An; Sergey L Sedinkin; Vincenzo Venditti
Journal:  Nanoscale Adv       Date:  2022-05-10

3.  Gold Nanoparticles Augment N-Terminal Cleavage and Splicing Reactions in Mycobacterium tuberculosis SufB.

Authors:  Ananya Nanda; Sourya Subhra Nasker; Anoop K Kushwaha; Deepak Kumar Ojha; Albert K Dearden; Saroj K Nayak; Sasmita Nayak
Journal:  Front Bioeng Biotechnol       Date:  2021-12-23

4.  Solution NMR of Nanoparticles in Serum: Protein Competition Influences Binding Thermodynamics and Kinetics.

Authors:  Joanna Xiuzhu Xu; Nicholas C Fitzkee
Journal:  Front Physiol       Date:  2021-08-17       Impact factor: 4.566

5.  Understanding How Staphylococcal Autolysin Domains Interact With Polystyrene Surfaces.

Authors:  Radha P Somarathne; Emily R Chappell; Y Randika Perera; Rahul Yadav; Joo Youn Park; Nicholas C Fitzkee
Journal:  Front Microbiol       Date:  2021-05-19       Impact factor: 5.640

Review 6.  Biomolecular interactions of ultrasmall metallic nanoparticles and nanoclusters.

Authors:  Alioscka A Sousa; Peter Schuck; Sergio A Hassan
Journal:  Nanoscale Adv       Date:  2021-04-28
  6 in total

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