Literature DB >> 34432422

Quantitative Measurement of Multiprotein Nanoparticle Interactions Using NMR Spectroscopy.

Joanna Xiuzhu Xu1, Md Siddik Alom1, Nicholas C Fitzkee1.   

Abstract

An effective intensity-based reference is a cornerstone for quantitative nuclear magnetic resonance (NMR) studies, as the molecular concentration is encoded in its signal. In theory, NMR is well suited for the measurement of competitive protein adsorption onto nanoparticle (NP) surfaces, but current referencing systems are not optimized for multidimensional experiments. Presented herein is a simple and novel referencing system using 15N tryptophan (Trp) as an external reference for 1H-15N 2D NMR experiments. The referencing system is validated by the determination of the binding capacity of a single protein onto gold NPs. Then, the Trp reference is applied to protein mixtures, and signals from each protein are accurately quantified. All results are consistent with previous studies, but with substantially higher precision, indicating that the Trp reference can accurately calibrate the residue peak intensities and reduce systematic errors. Finally, the proposed Trp reference is used to kinetically monitor in situ and in real time the competitive adsorption of different proteins. As a challenging test case, we successfully apply our approach to a mixture of protein variants differing by only a single residue. Our results show that the binding of one protein will affect the binding of the other, leading to an altered NP corona composition. This work therefore highlights the importance of studying protein-NP interactions in protein mixtures in situ, and the referencing system developed here enables the quantification of binding kinetics and thermodynamics of multiple proteins using various 1H-15N 2D NMR techniques.

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Year:  2021        PMID: 34432422      PMCID: PMC8504168          DOI: 10.1021/acs.analchem.1c01911

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   8.008


  36 in total

1.  SOFAST-HMQC experiments for recording two-dimensional heteronuclear correlation spectra of proteins within a few seconds.

Authors:  Paul Schanda; Eriks Kupce; Bernhard Brutscher
Journal:  J Biomol NMR       Date:  2005-12       Impact factor: 2.835

Review 2.  Protein-nanoparticle interactions: opportunities and challenges.

Authors:  Morteza Mahmoudi; Iseult Lynch; Mohammad Reza Ejtehadi; Marco P Monopoli; Francesca Baldelli Bombelli; Sophie Laurent
Journal:  Chem Rev       Date:  2011-06-21       Impact factor: 60.622

Review 3.  Biosafety and bioapplication of nanomaterials by designing protein-nanoparticle interactions.

Authors:  Sheng-Tao Yang; Ying Liu; Yan-Wen Wang; Aoneng Cao
Journal:  Small       Date:  2013-01-23       Impact factor: 13.281

4.  Understanding Protein Structure Deformation on the Surface of Gold Nanoparticles of Varying Size.

Authors:  Karen E Woods; Y Randika Perera; Mackenzie B Davidson; Chloe A Wilks; Dinesh K Yadav; Nicholas C Fitzkee
Journal:  J Phys Chem C Nanomater Interfaces       Date:  2016-11-21       Impact factor: 4.126

5.  Dipole-Modulated Downconversion Nanoparticles as Label-Free Biological Sensors.

Authors:  Khashayar R Bajgiran; James A Dorman; Adam T Melvin
Journal:  ACS Sens       Date:  2020-01-10       Impact factor: 7.711

Review 6.  Personalized protein corona on nanoparticles and its clinical implications.

Authors:  Claudia Corbo; Roberto Molinaro; Mateen Tabatabaei; Omid C Farokhzad; Morteza Mahmoudi
Journal:  Biomater Sci       Date:  2017-02-28       Impact factor: 6.843

7.  Attenuated T2 relaxation by mutual cancellation of dipole-dipole coupling and chemical shift anisotropy indicates an avenue to NMR structures of very large biological macromolecules in solution.

Authors:  K Pervushin; R Riek; G Wider; K Wüthrich
Journal:  Proc Natl Acad Sci U S A       Date:  1997-11-11       Impact factor: 11.205

8.  Visualizing transient dark states by NMR spectroscopy.

Authors:  Nicholas J Anthis; G Marius Clore
Journal:  Q Rev Biophys       Date:  2015-02       Impact factor: 5.318

9.  Impact of silica nanoparticle surface chemistry on protein corona formation and consequential interactions with biological cells.

Authors:  Andréa Kurtz-Chalot; Christian Villiers; Jérémie Pourchez; Delphine Boudard; Matteo Martini; Patrice N Marche; Michèle Cottier; Valérie Forest
Journal:  Mater Sci Eng C Mater Biol Appl       Date:  2017-02-10       Impact factor: 7.328

Review 10.  The interaction between nanoparticles-protein corona complex and cells and its toxic effect on cells.

Authors:  Na Liu; Meng Tang; Jiandong Ding
Journal:  Chemosphere       Date:  2019-12-12       Impact factor: 7.086

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  1 in total

Review 1.  Solution NMR methods for structural and thermodynamic investigation of nanoparticle adsorption equilibria.

Authors:  Yeongseo An; Sergey L Sedinkin; Vincenzo Venditti
Journal:  Nanoscale Adv       Date:  2022-05-10
  1 in total

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