Literature DB >> 34035308

Comprehensive ultrahigh resolution whole brain in vivo MRI dataset as a human phantom.

Falk Lüsebrink1,2, Hendrik Mattern3, Renat Yakupov4, Julio Acosta-Cabronero5, Mohammad Ashtarayeh6, Steffen Oeltze-Jafra7,4,8, Oliver Speck3,4,8,9.   

Abstract

Here, we present an extension to our previously published structural ultrahigh resolution T1-weighted magnetic resonance imaging (MRI) dataset with an isotropic resolution of 250 µm, consisting of multiple additional ultrahigh resolution contrasts. Included are up to 150 µm Time-of-Flight angiography, an updated 250 µm structural T1-weighted reconstruction, 330 µm quantitative susceptibility mapping, up to 450 µm structural T2-weighted imaging, 700 µm T1-weighted back-to-back scans, 800 µm diffusion tensor imaging, one hour continuous resting-state functional MRI with an isotropic spatial resolution of 1.8 mm as well as more than 120 other structural T1-weighted volumes together with multiple corresponding proton density weighted acquisitions collected over ten years. All data are from the same participant and were acquired on the same 7 T scanner. The repository contains the unprocessed data as well as (pre-)processing results. The data were acquired in multiple studies with individual goals. This is a unique and comprehensive collection comprising a "human phantom" dataset. Therefore, we compiled, processed, and structured the data, making them publicly available for further investigation.

Entities:  

Year:  2021        PMID: 34035308     DOI: 10.1038/s41597-021-00923-w

Source DB:  PubMed          Journal:  Sci Data        ISSN: 2052-4463            Impact factor:   6.444


  27 in total

1.  Prospective motion correction improves high-resolution quantitative susceptibility mapping at 7T.

Authors:  Hendrik Mattern; Alessandro Sciarra; Falk Lüsebrink; Julio Acosta-Cabronero; Oliver Speck
Journal:  Magn Reson Med       Date:  2018-10-09       Impact factor: 4.668

2.  Comparison of prospective head motion correction with NMR field probes and an optical tracking system.

Authors:  Martin Eschelbach; Ali Aghaeifar; Jonas Bause; Jonas Handwerker; Jens Anders; Eva-Maria Engel; Axel Thielscher; Klaus Scheffler
Journal:  Magn Reson Med       Date:  2018-07-29       Impact factor: 4.668

3.  Prospective motion correction enables highest resolution time-of-flight angiography at 7T.

Authors:  Hendrik Mattern; Alessandro Sciarra; Frank Godenschweger; Daniel Stucht; Falk Lüsebrink; Georg Rose; Oliver Speck
Journal:  Magn Reson Med       Date:  2017-12-11       Impact factor: 4.668

4.  Fat navigators and Moiré phase tracking comparison for motion estimation and retrospective correction.

Authors:  Frédéric Gretsch; Hendrik Mattern; Daniel Gallichan; Oliver Speck
Journal:  Magn Reson Med       Date:  2019-08-09       Impact factor: 4.668

5.  Symmetric diffeomorphic image registration with cross-correlation: evaluating automated labeling of elderly and neurodegenerative brain.

Authors:  B B Avants; C L Epstein; M Grossman; J C Gee
Journal:  Med Image Anal       Date:  2007-06-23       Impact factor: 8.545

Review 6.  SPM: a history.

Authors:  John Ashburner
Journal:  Neuroimage       Date:  2011-10-17       Impact factor: 6.556

7.  Measurement and correction of microscopic head motion during magnetic resonance imaging of the brain.

Authors:  Julian Maclaren; Brian S R Armstrong; Robert T Barrows; K A Danishad; Thomas Ernst; Colin L Foster; Kazim Gumus; Michael Herbst; Ilja Y Kadashevich; Todd P Kusik; Qiaotian Li; Cris Lovell-Smith; Thomas Prieto; Peter Schulze; Oliver Speck; Daniel Stucht; Maxim Zaitsev
Journal:  PLoS One       Date:  2012-11-07       Impact factor: 3.240

8.  Distortion correction in EPI using an extended PSF method with a reversed phase gradient approach.

Authors:  Myung-Ho In; Oleg Posnansky; Erik B Beall; Mark J Lowe; Oliver Speck
Journal:  PLoS One       Date:  2015-02-23       Impact factor: 3.240

9.  T1-weighted in vivo human whole brain MRI dataset with an ultrahigh isotropic resolution of 250 μm.

Authors:  Falk Lüsebrink; Alessandro Sciarra; Hendrik Mattern; Renat Yakupov; Oliver Speck
Journal:  Sci Data       Date:  2017-03-14       Impact factor: 6.444

10.  MRIQC: Advancing the automatic prediction of image quality in MRI from unseen sites.

Authors:  Oscar Esteban; Daniel Birman; Marie Schaer; Oluwasanmi O Koyejo; Russell A Poldrack; Krzysztof J Gorgolewski
Journal:  PLoS One       Date:  2017-09-25       Impact factor: 3.240

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  2 in total

1.  Microvascular imaging of the unstained human superior colliculus using synchrotron-radiation phase-contrast microtomography.

Authors:  Ju Young Lee; Andreas F Mack; Thomas Shiozawa; Renata Longo; Giuliana Tromba; Klaus Scheffler; Gisela E Hagberg
Journal:  Sci Rep       Date:  2022-06-02       Impact factor: 4.996

2.  Imaging of the pial arterial vasculature of the human brain in vivo using high-resolution 7T time-of-flight angiography.

Authors:  Saskia Bollmann; Hendrik Mattern; Michaël Bernier; Simon D Robinson; Daniel Park; Oliver Speck; Jonathan R Polimeni
Journal:  Elife       Date:  2022-04-29       Impact factor: 8.713

  2 in total

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