Literature DB >> 34033106

Two Plasmid-Based Systems for CRISPR/Cas9 Mediated Knockout of Target Genes.

Cai M Roberts1, Elena S Ratner2.   

Abstract

CRISPR/Cas9-based gene editing is a recent advance that allows for the knockout or alteration of target genes within mammalian cells. Many variations of the technique exist, but here we describe two systems of plasmid-based CRISPR gene knockout which together allow for the selective knockout of virtually any gene target. Compared with other CRISPR-based systems, these plasmids have the advantages of delivering all the necessary components in one plasmid, choice of multiple selectable markers, and choice of route of administration into target cells. In addition, potential off-target effects from one system (dependent upon selection of target gene) can be overcome through use of the second system. Strategies for optimizing the knockout process and selection of finished cell lines are also presented.

Entities:  

Keywords:  CRISPR; Cas9; Knockout; Nickase; Plasmids; Selection; Transfection; sgRNA

Year:  2021        PMID: 34033106     DOI: 10.1007/978-1-0716-1162-3_18

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  15 in total

1.  Impact of the KU80 pathway on NHEJ-induced genome rearrangements in mammalian cells.

Authors:  Josée Guirouilh-Barbat; Sylvie Huck; Pascale Bertrand; Livia Pirzio; Chantal Desmaze; Laure Sabatier; Bernard S Lopez
Journal:  Mol Cell       Date:  2004-06-04       Impact factor: 17.970

Review 2.  The roles of CRISPR-Cas systems in adaptive immunity and beyond.

Authors:  Rodolphe Barrangou
Journal:  Curr Opin Immunol       Date:  2015-01-06       Impact factor: 7.486

3.  Cardiologists send up a trial balloon in new efforts to relieve heart failure.

Authors:  M F Goldsmith
Journal:  JAMA       Date:  1987-01-16       Impact factor: 56.272

4.  Multifocal pigmentation of prostatic and bladder urothelium.

Authors:  J Alroy; A A Ucci; J A Heaney; H D Mitcheson; V E Gavris; W Woods
Journal:  J Urol       Date:  1986-07       Impact factor: 7.450

5.  Serum and cell-mediated viral-specific delayed cutaneous basophil reactions during cytomegalovirus infection of guinea pigs.

Authors:  B P Griffith; P W Askenase; G D Hsiung
Journal:  Cell Immunol       Date:  1982-05-01       Impact factor: 4.868

6.  A TALE nuclease architecture for efficient genome editing.

Authors:  Jeffrey C Miller; Siyuan Tan; Guijuan Qiao; Kyle A Barlow; Jianbin Wang; Danny F Xia; Xiangdong Meng; David E Paschon; Elo Leung; Sarah J Hinkley; Gladys P Dulay; Kevin L Hua; Irina Ankoudinova; Gregory J Cost; Fyodor D Urnov; H Steve Zhang; Michael C Holmes; Lei Zhang; Philip D Gregory; Edward J Rebar
Journal:  Nat Biotechnol       Date:  2010-12-22       Impact factor: 54.908

7.  Rapid "open-source" engineering of customized zinc-finger nucleases for highly efficient gene modification.

Authors:  Morgan L Maeder; Stacey Thibodeau-Beganny; Anna Osiak; David A Wright; Reshma M Anthony; Magdalena Eichtinger; Tao Jiang; Jonathan E Foley; Ronnie J Winfrey; Jeffrey A Townsend; Erica Unger-Wallace; Jeffry D Sander; Felix Müller-Lerch; Fengli Fu; Joseph Pearlberg; Carl Göbel; Justin P Dassie; Shondra M Pruett-Miller; Matthew H Porteus; Dennis C Sgroi; A John Iafrate; Drena Dobbs; Paul B McCray; Toni Cathomen; Daniel F Voytas; J Keith Joung
Journal:  Mol Cell       Date:  2008-07-25       Impact factor: 17.970

8.  CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III.

Authors:  Elitza Deltcheva; Krzysztof Chylinski; Cynthia M Sharma; Karine Gonzales; Yanjie Chao; Zaid A Pirzada; Maria R Eckert; Jörg Vogel; Emmanuelle Charpentier
Journal:  Nature       Date:  2011-03-31       Impact factor: 49.962

Review 9.  Zinc finger nucleases: custom-designed molecular scissors for genome engineering of plant and mammalian cells.

Authors:  Sundar Durai; Mala Mani; Karthikeyan Kandavelou; Joy Wu; Matthew H Porteus; Srinivasan Chandrasegaran
Journal:  Nucleic Acids Res       Date:  2005-10-26       Impact factor: 16.971

Review 10.  Classification and evolution of type II CRISPR-Cas systems.

Authors:  Krzysztof Chylinski; Kira S Makarova; Emmanuelle Charpentier; Eugene V Koonin
Journal:  Nucleic Acids Res       Date:  2014-04-11       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.