Literature DB >> 34027658

Development and Application of a Novel Semi-quantification Approach in LC-QToF-MS Analysis of Natural Products.

Reza Aalizadeh1, Anthi Panara1, Nikolaos S Thomaidis1.   

Abstract

Use of high-resolution mass spectrometry (HRMS) including a MS calibration method has enabled simultaneous identification and quantification of knowns/unknowns. This has expanded our knowledge about the existing sample relevant chemical space in a way beyond reconciliation with a quantification task. This is largely due to fact that reference standards are not always available to achieve quantitative analysis. In this scenario, a semi-quantitative approach can fill the gap and provide a rough estimation of concentration. This research aimed to develop and compare several semi-quantification approaches based on chemical similarity or properties. The ionization efficiency scale was created for several groups of natural products. Advanced modeling approach based on a support vector machine was conducted to learn from the experimental ionization efficiency and apply it to unknowns or suspected compounds to predict their ionization efficiency in electrospray ionization mode. The developed semi-quantification workflows could be useful in most HRMS based "omics" areas, especially in natural products discovery.

Entities:  

Keywords:  LC−HRMS; chemometrics; natural products; semi-quantification

Year:  2021        PMID: 34027658     DOI: 10.1021/jasms.1c00032

Source DB:  PubMed          Journal:  J Am Soc Mass Spectrom        ISSN: 1044-0305            Impact factor:   3.109


  5 in total

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Journal:  Environ Int       Date:  2021-12-02       Impact factor: 9.621

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3.  Uncertainty estimation strategies for quantitative non-targeted analysis.

Authors:  Louis C Groff; Jarod N Grossman; Anneli Kruve; Jeffrey M Minucci; Charles N Lowe; James P McCord; Dustin F Kapraun; Katherine A Phillips; S Thomas Purucker; Alex Chao; Caroline L Ring; Antony J Williams; Jon R Sobus
Journal:  Anal Bioanal Chem       Date:  2022-06-14       Impact factor: 4.478

4.  The Potential of Sewage Sludge to Predict and Evaluate the Human Chemical Exposome.

Authors:  Ruben Gil-Solsona; Maria-Christina Nika; Mariona Bustamante; Cristina M Villanueva; Maria Foraster; Marta Cosin-Tomás; Nikiforos Alygizakis; Maria Dolores Gómez-Roig; Elisa Llurba-Olive; Jordi Sunyer; Nikolaos S Thomaidis; Payam Dadvand; Pablo Gago-Ferrero
Journal:  Environ Sci Technol Lett       Date:  2021-11-12

5.  Approaches for assessing performance of high-resolution mass spectrometry-based non-targeted analysis methods.

Authors:  Christine M Fisher; Katherine T Peter; Seth R Newton; Andrew J Schaub; Jon R Sobus
Journal:  Anal Bioanal Chem       Date:  2022-07-07       Impact factor: 4.478

  5 in total

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