Literature DB >> 34011550

Adnaviria: a New Realm for Archaeal Filamentous Viruses with Linear A-Form Double-Stranded DNA Genomes.

Mart Krupovic1, Jens H Kuhn2, Fengbin Wang3, Diana P Baquero1, Valerian V Dolja4, Edward H Egelman3, David Prangishvili1,5, Eugene V Koonin6.   

Abstract

The International Committee on Taxonomy of Viruses (ICTV) has recently adopted a comprehensive, hierarchical system of virus taxa. The highest ranks in this hierarchy are realms, each of which is considered monophyletic but apparently originated independently of other realms. Here, we announce the creation of a new realm, Adnaviria, which unifies archaeal filamentous viruses with linear A-form double-stranded DNA genomes and characteristic major capsid proteins unrelated to those encoded by other known viruses.

Entities:  

Keywords:  A-form DNA; International Committee on Taxonomy of Viruses (ICTV); Ligamenvirales; Lipothrixviridae; Rudiviridae; Tokiviricetes; Tristromaviridae; hyperthermophilic archaea; major capsid protein; virus classification; virus evolution; virus structure and assembly; virus taxonomy

Mesh:

Substances:

Year:  2021        PMID: 34011550      PMCID: PMC8274609          DOI: 10.1128/JVI.00673-21

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  32 in total

Review 1.  The tobacco mosaic virus particle: structure and assembly.

Authors:  A Klug
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1999-03-29       Impact factor: 6.237

2.  Virology. A virus that infects a hyperthermophile encapsidates A-form DNA.

Authors:  Frank DiMaio; Xiong Yu; Elena Rensen; Mart Krupovic; David Prangishvili; Edward H Egelman
Journal:  Science       Date:  2015-05-22       Impact factor: 47.728

3.  Changes to virus taxonomy and the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses (2019).

Authors:  Peter J Walker; Stuart G Siddell; Elliot J Lefkowitz; Arcady R Mushegian; Donald M Dempsey; Bas E Dutilh; Balázs Harrach; Robert L Harrison; R Curtis Hendrickson; Sandra Junglen; Nick J Knowles; Andrew M Kropinski; Mart Krupovic; Jens H Kuhn; Max Nibert; Luisa Rubino; Sead Sabanadzovic; Peter Simmonds; Arvind Varsani; Francisco Murilo Zerbini; Andrew J Davison
Journal:  Arch Virol       Date:  2019-09       Impact factor: 2.574

4.  Diversity of viruses of the hyperthermophilic archaeal genus Aeropyrum, and isolation of the Aeropyrum pernix bacilliform virus 1, APBV1, the first representative of the family Clavaviridae.

Authors:  Tomohiro Mochizuki; Takashi Yoshida; Reiji Tanaka; Patrick Forterre; Yoshihiko Sako; David Prangishvili
Journal:  Virology       Date:  2010-04-28       Impact factor: 3.616

Review 5.  Global Organization and Proposed Megataxonomy of the Virus World.

Authors:  Eugene V Koonin; Valerian V Dolja; Mart Krupovic; Arvind Varsani; Yuri I Wolf; Natalya Yutin; F Murilo Zerbini; Jens H Kuhn
Journal:  Microbiol Mol Biol Rev       Date:  2020-03-04       Impact factor: 11.056

6.  Structure and assembly of archaeal viruses.

Authors:  Diana P Baquero; Ying Liu; Fengbin Wang; Edward H Egelman; David Prangishvili; Mart Krupovic
Journal:  Adv Virus Res       Date:  2020-10-05       Impact factor: 9.937

7.  ICTV Virus Taxonomy Profile: Clavaviridae.

Authors:  David Prangishvili; Tomohiro Mochizuki; Ying Liu; Mart Krupovic
Journal:  J Gen Virol       Date:  2019-09       Impact factor: 3.891

8.  A virus of hyperthermophilic archaea with a unique architecture among DNA viruses.

Authors:  Elena Ilka Rensen; Tomohiro Mochizuki; Emmanuelle Quemin; Stefan Schouten; Mart Krupovic; David Prangishvili
Journal:  Proc Natl Acad Sci U S A       Date:  2016-02-16       Impact factor: 11.205

9.  Differentiation and Structure in Sulfolobus islandicus Rod-Shaped Virus Populations.

Authors:  Maria A Bautista; Jesse A Black; Nicholas D Youngblut; Rachel J Whitaker
Journal:  Viruses       Date:  2017-05-19       Impact factor: 5.048

10.  Unique architecture of thermophilic archaeal virus APBV1 and its genome packaging.

Authors:  Denis Ptchelkine; Ashley Gillum; Tomohiro Mochizuki; Soizick Lucas-Staat; Ying Liu; Mart Krupovic; Simon E V Phillips; David Prangishvili; Juha T Huiskonen
Journal:  Nat Commun       Date:  2017-11-10       Impact factor: 14.919

View more
  7 in total

1.  The complexity landscape of viral genomes.

Authors:  Jorge Miguel Silva; Diogo Pratas; Tânia Caetano; Sérgio Matos
Journal:  Gigascience       Date:  2022-08-11       Impact factor: 7.658

2.  A closed Candidatus Odinarchaeum chromosome exposes Asgard archaeal viruses.

Authors:  Daniel Tamarit; Eva F Caceres; Mart Krupovic; Reindert Nijland; Laura Eme; Nicholas P Robinson; Thijs J G Ettema
Journal:  Nat Microbiol       Date:  2022-06-27       Impact factor: 30.964

Review 3.  The Baltimore Classification of Viruses 50 Years Later: How Does It Stand in the Light of Virus Evolution?

Authors:  Eugene V Koonin; Mart Krupovic; Vadim I Agol
Journal:  Microbiol Mol Biol Rev       Date:  2021-07-14       Impact factor: 13.044

Review 4.  Jingchuvirales: a New Taxonomical Framework for a Rapidly Expanding Order of Unusual Monjiviricete Viruses Broadly Distributed among Arthropod Subphyla.

Authors:  Nicholas Di Paola; Jens H Kuhn; Nolwenn M Dheilly; Sandra Junglen; Sofia Paraskevopoulou; Thomas S Postler; Mang Shi
Journal:  Appl Environ Microbiol       Date:  2022-02-02       Impact factor: 5.005

5.  Bacterial Viruses Subcommittee and Archaeal Viruses Subcommittee of the ICTV: update of taxonomy changes in 2021.

Authors:  Mart Krupovic; Dann Turner; Vera Morozova; Mike Dyall-Smith; Hanna M Oksanen; Rob Edwards; Bas E Dutilh; Susan M Lehman; Alejandro Reyes; Diana P Baquero; Matthew B Sullivan; Jumpei Uchiyama; Jesca Nakavuma; Jakub Barylski; Mark J Young; Shishen Du; Poliane Alfenas-Zerbini; Alla Kushkina; Andrew M Kropinski; Ipek Kurtböke; J Rodney Brister; Cédric Lood; B L Sarkar; Tong Yigang; Ying Liu; Li Huang; Johannes Wittmann; Nina Chanishvili; Leonardo J van Zyl; Janis Rumnieks; Tomohiro Mochizuki; Matti Jalasvuori; Ramy K Aziz; Małgorzata Łobocka; Kenneth M Stedman; Andrey N Shkoporov; Annika Gillis; Xu Peng; François Enault; Petar Knezevic; Rob Lavigne; Sung-Keun Rhee; Virginija Cvirkaite-Krupovic; Cristina Moraru; Andrea I Moreno Switt; Minna M Poranen; Andrew Millard; David Prangishvili; Evelien M Adriaenssens
Journal:  Arch Virol       Date:  2021-11       Impact factor: 2.574

6.  Leviviricetes: expanding and restructuring the taxonomy of bacteria-infecting single-stranded RNA viruses.

Authors:  Julie Callanan; Stephen R Stockdale; Evelien M Adriaenssens; Jens H Kuhn; Janis Rumnieks; Mark J Pallen; Andrey N Shkoporov; Lorraine A Draper; R Paul Ross; Colin Hill
Journal:  Microb Genom       Date:  2021-11

7.  A filamentous archaeal virus is enveloped inside the cell and released through pyramidal portals.

Authors:  Diana P Baquero; Anastasia D Gazi; Martin Sachse; Junfeng Liu; Christine Schmitt; Maryse Moya-Nilges; Stefan Schouten; David Prangishvili; Mart Krupovic
Journal:  Proc Natl Acad Sci U S A       Date:  2021-08-10       Impact factor: 11.205

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.