Literature DB >> 33999499

Chemoproteomics for Plasmodium Parasite Drug Target Discovery.

Kuan-Yi Lu1, Christopher R Mansfield1, Michael C Fitzgerald2, Emily R Derbyshire1,2.   

Abstract

Emerging Plasmodium parasite drug resistance is threatening progress towards malaria control and elimination. While recent efforts in cell-based, high-throughput drug screening have produced first-in-class drugs with promising activities against different Plasmodium life cycle stages, most of these antimalarial agents have elusive mechanisms of action. Though challenging to address, target identification can provide valuable information to facilitate lead optimization and preclinical drug prioritization. Recently, proteome-wide methods for direct assessment of drug-protein interactions have emerged as powerful tools in a number of systems, including Plasmodium. In this review, we will discuss current chemoproteomic strategies that have been adapted to antimalarial drug target discovery, including affinity- and activity-based protein profiling and the energetics-based techniques thermal proteome profiling and stability of proteins from rates of oxidation. The successful application of chemoproteomics to the Plasmodium blood stage highlights the potential of these methods to link inhibitors to their molecular targets in more elusive Plasmodium life stages and intracellular pathogens in the future.
© 2021 Wiley-VCH GmbH.

Entities:  

Keywords:  Plasmodium; chemoproteomics; malaria; mechanism of action; target identification

Mesh:

Year:  2021        PMID: 33999499      PMCID: PMC8373781          DOI: 10.1002/cbic.202100155

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.461


  92 in total

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Review 2.  Phenotypic Screens in Antimalarial Drug Discovery.

Authors:  Marisa L Hovlid; Elizabeth A Winzeler
Journal:  Trends Parasitol       Date:  2016-05-27

3.  Thermal proximity coaggregation for system-wide profiling of protein complex dynamics in cells.

Authors:  Chris Soon Heng Tan; Ka Diam Go; Xavier Bisteau; Lingyun Dai; Chern Han Yong; Nayana Prabhu; Mert Burak Ozturk; Yan Ting Lim; Lekshmy Sreekumar; Johan Lengqvist; Vinay Tergaonkar; Philipp Kaldis; Radoslaw M Sobota; Pär Nordlund
Journal:  Science       Date:  2018-02-08       Impact factor: 47.728

4.  A genetic system to study Plasmodium falciparum protein function.

Authors:  Jakob Birnbaum; Sven Flemming; Nick Reichard; Alexandra Blancke Soares; Paolo Mesén-Ramírez; Ernst Jonscher; Bärbel Bergmann; Tobias Spielmann
Journal:  Nat Methods       Date:  2017-03-13       Impact factor: 28.547

5.  Production of Plasmodium falciparum gametocytes in vitro.

Authors:  Kathryn Shaw Saliba; Marcelo Jacobs-Lorena
Journal:  Methods Mol Biol       Date:  2013

6.  Identifying purine nucleoside phosphorylase as the target of quinine using cellular thermal shift assay.

Authors:  Jerzy M Dziekan; Han Yu; Dan Chen; Lingyun Dai; Grennady Wirjanata; Andreas Larsson; Nayana Prabhu; Radoslaw M Sobota; Zbynek Bozdech; Pär Nordlund
Journal:  Sci Transl Med       Date:  2019-01-02       Impact factor: 17.956

7.  A role for the protease falcipain 1 in host cell invasion by the human malaria parasite.

Authors:  Doron C Greenbaum; Amos Baruch; Munira Grainger; Zbynek Bozdech; Katlin F Medzihradszky; Juan Engel; Joseph DeRisi; Anthony A Holder; Matthew Bogyo
Journal:  Science       Date:  2002-12-06       Impact factor: 47.728

Review 8.  Muddled mechanisms: recent progress towards antimalarial target identification.

Authors:  Rachel L Edwards; Audrey R Odom John
Journal:  F1000Res       Date:  2016-10-13

9.  High-throughput screening of the Plasmodium falciparum cGMP-dependent protein kinase identified a thiazole scaffold which kills erythrocytic and sexual stage parasites.

Authors:  Maria Penzo; Laura de Las Heras-Dueña; Lydia Mata-Cantero; Beatriz Diaz-Hernandez; Maria-Jesus Vazquez-Muñiz; Sonja Ghidelli-Disse; Gerard Drewes; Elena Fernandez-Alvaro; David A Baker
Journal:  Sci Rep       Date:  2019-05-07       Impact factor: 4.379

10.  Using a Genetically Encoded Sensor to Identify Inhibitors of Toxoplasma gondii Ca2+ Signaling.

Authors:  Saima M Sidik; Miryam A Hortua Triana; Aditya S Paul; Majida El Bakkouri; Caroline G Hackett; Fanny Tran; Nicholas J Westwood; Raymond Hui; William J Zuercher; Manoj T Duraisingh; Silvia N J Moreno; Sebastian Lourido
Journal:  J Biol Chem       Date:  2016-03-01       Impact factor: 5.157

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  1 in total

Review 1.  Updated List of Transport Proteins in Plasmodium falciparum.

Authors:  Juliane Wunderlich
Journal:  Front Cell Infect Microbiol       Date:  2022-06-24       Impact factor: 6.073

  1 in total

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