Literature DB >> 33998370

Novel insights into the roles of tRNA-derived small RNAs.

Qiyu Pan1, Tingting Han1, Guoping Li1.   

Abstract

tRNA-derived small RNA (tsRNA) is a novel class of non-coding RNA that is usually produced from tRNA following endonuclease cleavage which occurs under stress conditions. There are two types of tsRNAs: tRNA-derived fragments (tRFs) and stress-induced tRNA halves (tiRNAs), which differ in their cleavage position. Many studies have demonstrated that tsRNAs are involved in various physiological and pathological processes apart from cancer and gene expression. In this review, we briefly described the biogenesis, classification, and characteristics of tsRNAs and summarized the current research progress of tsRNAs in metabolic diseases, senescence, reproduction, stress, and organ injury, and finally put forward some problems to be solved.

Entities:  

Keywords:  metabolic diseases; reproduction; senescence; tRNA derived small RNAs

Mesh:

Substances:

Year:  2021        PMID: 33998370      PMCID: PMC8632077          DOI: 10.1080/15476286.2021.1922009

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  99 in total

1.  tRNA binds to cytochrome c and inhibits caspase activation.

Authors:  Yide Mei; Jeongsik Yong; Hongtu Liu; Yigong Shi; Judy Meinkoth; Gideon Dreyfuss; Xiaolu Yang
Journal:  Mol Cell       Date:  2010-03-12       Impact factor: 17.970

2.  Stress induces tRNA cleavage by angiogenin in mammalian cells.

Authors:  Hanjiang Fu; Junjun Feng; Qin Liu; Fang Sun; Yi Tie; Jie Zhu; Ruiyun Xing; Zhixian Sun; Xiaofei Zheng
Journal:  FEBS Lett       Date:  2008-12-27       Impact factor: 4.124

3.  Endogenous tRNA-Derived Fragments Suppress Breast Cancer Progression via YBX1 Displacement.

Authors:  Hani Goodarzi; Xuhang Liu; Hoang C B Nguyen; Steven Zhang; Lisa Fish; Sohail F Tavazoie
Journal:  Cell       Date:  2015-05-07       Impact factor: 41.582

4.  RNA polymerase III limits longevity downstream of TORC1.

Authors:  Danny Filer; Maximillian A Thompson; Vakil Takhaveev; Adam J Dobson; Ilektra Kotronaki; James W M Green; Matthias Heinemann; Jennifer M A Tullet; Nazif Alic
Journal:  Nature       Date:  2017-11-29       Impact factor: 49.962

5.  Mature sperm small-RNA profile in the sparrow: implications for transgenerational effects of age on fitness.

Authors:  Wayo Matsushima; Kristiana Brink; Julia Schroeder; Eric A Miska; Katharina Gapp
Journal:  Environ Epigenet       Date:  2019-05-21

6.  Differential Expression Profiles and Functional Prediction of tRNA-Derived Small RNAs in Rats After Traumatic Spinal Cord Injury.

Authors:  Chuan Qin; Hao Feng; Chao Zhang; Xin Zhang; Yi Liu; De-Gang Yang; Liang-Jie Du; Ying-Chun Sun; Ming-Liang Yang; Feng Gao; Jian-Jun Li
Journal:  Front Mol Neurosci       Date:  2020-01-10       Impact factor: 5.639

Review 7.  tsRNAs: Novel small molecules from cell function and regulatory mechanism to therapeutic targets.

Authors:  Tingyu Zong; Yanyan Yang; Hui Zhao; Lin Li; Meixin Liu; Xiuxiu Fu; Guozhang Tang; Hong Zhou; Lynn Htet Htet Aung; Peifeng Li; Jianxun Wang; Zhibin Wang; Tao Yu
Journal:  Cell Prolif       Date:  2021-01-28       Impact factor: 6.831

8.  A novel class of tRNA-derived small RNAs extremely enriched in mature mouse sperm.

Authors:  Hongying Peng; Junchao Shi; Ying Zhang; He Zhang; Shangying Liao; Wei Li; Li Lei; Chunsheng Han; Lina Ning; Yujing Cao; Qi Zhou; Qi Chen; Enkui Duan
Journal:  Cell Res       Date:  2012-10-09       Impact factor: 25.617

9.  Small RNA sequencing reveals a novel tsRNA-06018 playing an important role during adipogenic differentiation of hMSCs.

Authors:  Tao Wang; Lingling Cao; Shan He; Kai Long; Xinping Wang; Hui Yu; Baicheng Ma; Xiaoyuan Xu; Weidong Li
Journal:  J Cell Mol Med       Date:  2020-09-16       Impact factor: 5.310

10.  RNA cytosine methylation by Dnmt2 and NSun2 promotes tRNA stability and protein synthesis.

Authors:  Francesca Tuorto; Reinhard Liebers; Tanja Musch; Matthias Schaefer; Sarah Hofmann; Stefanie Kellner; Michaela Frye; Mark Helm; Georg Stoecklin; Frank Lyko
Journal:  Nat Struct Mol Biol       Date:  2012-08-12       Impact factor: 15.369

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  6 in total

Review 1.  Context-Dependent Regulation of Gene Expression by Non-Canonical Small RNAs.

Authors:  Kinga Plawgo; Katarzyna Dorota Raczynska
Journal:  Noncoding RNA       Date:  2022-04-29

2.  tRNA-derived fragment TRF365 regulates the metabolism of anterior cruciate ligament cells by targeting IKBKB.

Authors:  Dianbo Long; Yiyang Xu; Guping Mao; Ruobing Xin; Zengfa Deng; Hongyi Liao; Zhiwen Li; Zhi Yang; Baoxi Yu; Zhijian Yang; Aishan He; Ziji Zhang; Yan Kang
Journal:  Cell Death Discov       Date:  2022-01-10

3.  tRNAGlyGCC-Derived Internal Fragment (i-tRF-GlyGCC) in Ovarian Cancer Treatment Outcome and Progression.

Authors:  Konstantina Panoutsopoulou; Tobias Dreyer; Julia Dorn; Eva Obermayr; Sven Mahner; Toon van Gorp; Ioana Braicu; Robert Zeillinger; Viktor Magdolen; Margaritis Avgeris; Andreas Scorilas
Journal:  Cancers (Basel)       Date:  2021-12-22       Impact factor: 6.639

4.  Characteristics of Transfer RNA-Derived Fragments Expressed during Human Renal Cell Development: The Role of Dicer in tRF Biogenesis.

Authors:  Marek Kazimierczyk; Marta Wojnicka; Ewa Biała; Paulina Żydowicz-Machtel; Barbara Imiołczyk; Tomasz Ostrowski; Anna Kurzyńska-Kokorniak; Jan Wrzesinski
Journal:  Int J Mol Sci       Date:  2022-03-26       Impact factor: 5.923

Review 5.  Current Status of Regulatory Non-Coding RNAs Research in the Tritryp.

Authors:  Rafael Sebastián Fort; Santiago Chavez; Juan M Trinidad Barnech; Carolina Oliveira-Rizzo; Pablo Smircich; José Roberto Sotelo-Silveira; María Ana Duhagon
Journal:  Noncoding RNA       Date:  2022-07-18

6.  TRFs and tiRNAs sequence in acute rejection for vascularized composite allotransplantation.

Authors:  Shengli Li; Jianda Zhou; Shoubao Wang; Yuan Fang; Haibo Li; Jingting Chen; Yao Xiong; Xu Li; Binbin Sun
Journal:  Sci Data       Date:  2022-09-07       Impact factor: 8.501

  6 in total

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