Literature DB >> 33987243

A computed tomography (CT)-derived radiomics approach for predicting primary co-mutations involving TP53 and epidermal growth factor receptor (EGFR) in patients with advanced lung adenocarcinomas (LUAD).

Ying Zhu1, Yu-Biao Guo2, Di Xu3, Jing Zhang2, Zhen-Guo Liu4, Xi Wu1, Xiao-Yu Yang1, Dan-Dan Chang1, Min Xu5, Jing Yan5, Zun-Fu Ke6, Shi-Ting Feng1, Yang-Li Liu2.   

Abstract

BACKGROUND: Epidermal growth factor receptor (EGFR) co-mutated with TP53 could reduce responsiveness to tyrosine kinase inhibitors (TKIs) and worsen patients' prognosis compared to TP53 wild type patients in. EGFR: mutated lung adenocarcinomas (LUAD). To identify this genetically unique subset prior to treatment through computed tomography (CT) images had not been reported yet.
METHODS: Stage III and IV LUAD with known mutation status of EGFR and TP53 from The First Affiliated Hospital of Sun Yat-sen University (May 1, 2017 to June 1, 2020) were collected. Characteristics of pretreatment enhanced-CT images were analyzed. One-versus-one was used as the multiclass classification strategy to distinguish the three subtypes of co-mutations: EGFR + & TP53 +, EGFR + & TP53 -, EGFR -. The clinical model, semantic model, radiomics model and integrated model were built. Area under the receiver-operating characteristic curves (AUCs) were used to evaluate the prediction efficacy.
RESULTS: A total of 199 patients were enrolled, including 83 (42%) cases of EGFR -, 55 (28%) cases of EGFR + & TP53 +, 61 (31%) cases of EGFR + & TP53 -. Among the four different models, the integrated model displayed the best performance for all the three subtypes of co-mutations: EGFR - (AUC, 0.857; accuracy, 0.817; sensitivity, 0.998; specificity, 0.663), EGFR + & TP53 + (AUC, 0.791; accuracy, 0.758; sensitivity, 0.762; specificity, 0.783), EGFR + & TP53 - (AUC, 0.761; accuracy, 0.813; sensitivity, 0.594; specificity, 0.977). The radiomics model was slightly inferior to the integrated model. The results for the clinical and the semantic models were dissatisfactory, with AUCs less than 0.700 for all the three subtypes.
CONCLUSIONS: CT imaging based artificial intelligence (AI) is expected to distinguish co-mutation status involving TP53 and EGFR. The proposed integrated model may serve as an important alternative marker for preselecting patients who will be adaptable to and sensitive to TKIs. 2021 Annals of Translational Medicine. All rights reserved.

Entities:  

Keywords:  TP53; epidermal growth factor receptor (EGFR); lung adenocarcinoma (LUAD); radiomics; tomography, X-ray computed

Year:  2021        PMID: 33987243      PMCID: PMC8105857          DOI: 10.21037/atm-20-6473

Source DB:  PubMed          Journal:  Ann Transl Med        ISSN: 2305-5839


  42 in total

1.  CT Features of Epidermal Growth Factor Receptor-Mutated Adenocarcinoma of the Lung: Comparison with Nonmutated Adenocarcinoma.

Authors:  Mizue Hasegawa; Fumikazu Sakai; Rinako Ishikawa; Fumiko Kimura; Hironori Ishida; Kunihiko Kobayashi
Journal:  J Thorac Oncol       Date:  2016-02-23       Impact factor: 15.609

2.  Radiogenomics in head and neck cancer: correlation of radiomic heterogeneity and somatic mutations in TP53, FAT1 and KMT2D.

Authors:  Kerstin Zwirner; Franz J Hilke; German Demidov; Jairo Socarras Fernandez; Stephan Ossowski; Cihan Gani; Daniela Thorwarth; Olaf Riess; Daniel Zips; Christopher Schroeder; Stefan Welz
Journal:  Strahlenther Onkol       Date:  2019-05-23       Impact factor: 3.621

3.  Impact of TP53 Mutations on Outcome in EGFR-Mutated Patients Treated with First-Line Tyrosine Kinase Inhibitors.

Authors:  Matteo Canale; Elisabetta Petracci; Angelo Delmonte; Elisa Chiadini; Claudio Dazzi; Maximilian Papi; Laura Capelli; Claudia Casanova; Nicoletta De Luigi; Marita Mariotti; Alessandro Gamboni; Rita Chiari; Chiara Bennati; Daniele Calistri; Vienna Ludovini; Lucio Crinò; Dino Amadori; Paola Ulivi
Journal:  Clin Cancer Res       Date:  2016-10-25       Impact factor: 12.531

4.  Nomogram to predict the presence of EGFR activating mutation in lung adenocarcinoma.

Authors:  N Girard; C S Sima; D M Jackman; L V Sequist; H Chen; J C-H Yang; H Ji; B Waltman; R Rosell; M Taron; M F Zakowski; M Ladanyi; G Riely; W Pao
Journal:  Eur Respir J       Date:  2011-07-20       Impact factor: 16.671

5.  Comparative analysis of clinicoradiologic characteristics of lung adenocarcinomas with ALK rearrangements or EGFR mutations.

Authors:  J Y Zhou; J Zheng; Z F Yu; W B Xiao; J Zhao; K Sun; B Wang; X Chen; L N Jiang; W Ding; J Y Zhou
Journal:  Eur Radiol       Date:  2015-01-11       Impact factor: 5.315

6.  Multifunctional imaging signature for V-KI-RAS2 Kirsten rat sarcoma viral oncogene homolog (KRAS) mutations in colorectal cancer.

Authors:  Kenneth A Miles; Balaji Ganeshan; Manuel Rodriguez-Justo; Vicky J Goh; Zia Ziauddin; Alec Engledow; Marie Meagher; Raymondo Endozo; Stuart A Taylor; Stephen Halligan; Peter J Ell; Ashley M Groves
Journal:  J Nucl Med       Date:  2014-02-10       Impact factor: 10.057

7.  The prognostic value of TP53 and its correlation with EGFR mutation in advanced non-small cell lung cancer, an analysis based on cBioPortal data base.

Authors:  Xiao-Dong Jiao; Bao-Dong Qin; Pu You; Jian Cai; Yuan-Sheng Zang
Journal:  Lung Cancer       Date:  2018-07-04       Impact factor: 5.705

8.  CT texture analysis of lung adenocarcinoma: can Radiomic features be surrogate biomarkers for EGFR mutation statuses.

Authors:  Dongdong Mei; Yan Luo; Yan Wang; Jingshan Gong
Journal:  Cancer Imaging       Date:  2018-12-14       Impact factor: 3.909

9.  CT Slice Thickness and Convolution Kernel Affect Performance of a Radiomic Model for Predicting EGFR Status in Non-Small Cell Lung Cancer: A Preliminary Study.

Authors:  Yajun Li; Lin Lu; Manjun Xiao; Laurent Dercle; Yue Huang; Zishu Zhang; Lawrence H Schwartz; Daiqiang Li; Binsheng Zhao
Journal:  Sci Rep       Date:  2018-12-17       Impact factor: 4.379

10.  A CT-derived deep neural network predicts for programmed death ligand-1 expression status in advanced lung adenocarcinomas.

Authors:  Ying Zhu; Yang-Li Liu; Yu Feng; Xiao-Yu Yang; Jing Zhang; Dan-Dan Chang; Xi Wu; Xi Tian; Ke-Jing Tang; Can-Mao Xie; Yu-Biao Guo; Shi-Ting Feng; Zun-Fu Ke
Journal:  Ann Transl Med       Date:  2020-08
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  2 in total

1.  Identification and validation of a hypoxia-immune signature for overall survival prediction in lung adenocarcinoma.

Authors:  Yong Li; Huiqin Huang; Meichen Jiang; Nanding Yu; Xiangli Ye; Zhenghui Huang; Limin Chen
Journal:  Front Genet       Date:  2022-10-03       Impact factor: 4.772

2.  Deep Radiotranscriptomics of Non-Small Cell Lung Carcinoma for Assessing Molecular and Histology Subtypes with a Data-Driven Analysis.

Authors:  Eleftherios Trivizakis; John Souglakos; Apostolos Karantanas; Kostas Marias
Journal:  Diagnostics (Basel)       Date:  2021-12-17
  2 in total

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