Literature DB >> 33983483

Integrated Genomic and Functional Characterization of the Anti-diabetic Potential of Arthrobacter sp. SW1.

Shraddha Shaligram1, Nitin P Narwade2, Shreyas V Kumbhare2, Manobjyoti Bordoloi3, Kashyap J Tamuli4, Shyamalendu Nath4, T Parimelazhagan5, Vikas S Patil2, Atya Kapley6, Shrikant P Pawar2, Dhiraj P Dhotre2, M G Muddeshwar7, Hemant J Purohit6, Yogesh S Shouche2.   

Abstract

For decades, bacterial natural products have served as valuable resources for developing novel drugs to treat several human diseases. Recent advancements in the integrative approach of using genomic and functional tools have proved beneficial in obtaining a comprehensive understanding of these biomolecules. This study presents an in-depth characterization of the anti-diabetic activity exhibited by a bacterial isolate SW1, isolated from an effluent treatment plant. As a primary screening, we assessed the isolate for its potential to inhibit alpha-amylase and alpha-glucosidase enzymes. Upon confirmation, we further utilized LC-MS, ESI-MS/MS, and NMR spectroscopy to identify and characterize the biomolecule. These efforts were coupled with the genomic assessment of the biosynthetic gene cluster involved in the anti-diabetic compound production. Our investigation discovered that the isolate SW1 inhibited both α-amylase and α-glucosidase activity. The chemical analysis suggested the production of acarbose, an anti-diabetic biomolecule, which was further confirmed by the presence of biosynthetic gene cluster "acb" in the genome. Our in-depth chemical characterization and genome mining approach revealed the potential of bacteria from an unconventional niche, an effluent treatment plant. To the best of our knowledge, it is one of the first few reports of acarbose production from the genus Arthrobacter.

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Year:  2021        PMID: 33983483     DOI: 10.1007/s00284-021-02523-8

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  27 in total

Review 1.  Taxonomy, Physiology, and Natural Products of Actinobacteria.

Authors:  Essaid Ait Barka; Parul Vatsa; Lisa Sanchez; Nathalie Gaveau-Vaillant; Cedric Jacquard; Jan P Meier-Kolthoff; Hans-Peter Klenk; Christophe Clément; Yder Ouhdouch; Gilles P van Wezel
Journal:  Microbiol Mol Biol Rev       Date:  2015-11-25       Impact factor: 11.056

2.  Bioprospecting around Arctic islands: Marine bacteria as rich source of biocatalysts.

Authors:  Concetta De Santi; Bjørn Altermark; Donatella de Pascale; Nils-Peder Willassen
Journal:  J Basic Microbiol       Date:  2015-12-11       Impact factor: 2.281

Review 3.  Empirical antibacterial drug discovery--foundation in natural products.

Authors:  Sheo B Singh; John F Barrett
Journal:  Biochem Pharmacol       Date:  2006-01-19       Impact factor: 5.858

4.  Assessment of microbial diversity in effluent treatment plants by culture dependent and culture independent approaches.

Authors:  Asha Rani; Shalini Porwal; Rakesh Sharma; Atya Kapley; Hemant J Purohit; Vipin Chandra Kalia
Journal:  Bioresour Technol       Date:  2008-02-14       Impact factor: 9.642

5.  Eubacterial diversity of activated biomass from a common effluent treatment plant.

Authors:  Atya Kapley; Thierry De Baere; Hemant J Purohit
Journal:  Res Microbiol       Date:  2007-04-27       Impact factor: 3.992

6.  Genomic and chemical insights into biosurfactant production by the mangrove-derived strain Bacillus safensis CCMA-560.

Authors:  Daniela Ferreira Domingos; Andreia Fonseca de Faria; Renan de Souza Galaverna; Marcos Nogueira Eberlin; Paul Greenfield; Tiago Domingues Zucchi; Itamar Soares Melo; Nai Tran-Dinh; David Midgley; Valéria Maia de Oliveira
Journal:  Appl Microbiol Biotechnol       Date:  2015-01-15       Impact factor: 4.813

Review 7.  Microbial metabolites in health and disease: Navigating the unknown in search of function.

Authors:  Kristina B Martinez; Vanessa Leone; Eugene B Chang
Journal:  J Biol Chem       Date:  2017-04-07       Impact factor: 5.157

8.  A Long-Acting FGF21 Molecule, PF-05231023, Decreases Body Weight and Improves Lipid Profile in Non-human Primates and Type 2 Diabetic Subjects.

Authors:  Saswata Talukdar; Yingjiang Zhou; Dongmei Li; Michelle Rossulek; Jennifer Dong; Veena Somayaji; Yan Weng; Ronald Clark; Adhiraj Lanba; Bryn M Owen; Martin B Brenner; Jeffrey K Trimmer; Kathryn E Gropp; Jeffrey R Chabot; Derek M Erion; Timothy P Rolph; Bryan Goodwin; Roberto A Calle
Journal:  Cell Metab       Date:  2016-03-08       Impact factor: 27.287

Review 9.  Natural products for cancer chemotherapy.

Authors:  Arnold L Demain; Preeti Vaishnav
Journal:  Microb Biotechnol       Date:  2010-11-18       Impact factor: 5.813

10.  Extraction and Identification of Antibacterial Secondary Metabolites from Marine Streptomyces sp. VITBRK2.

Authors:  Benita Mercy Rajan; Krishnan Kannabiran
Journal:  Int J Mol Cell Med       Date:  2014
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