Literature DB >> 33977119

The diagnostic accuracy of Artificial Intelligence-Assisted CT imaging in COVID-19 disease: A systematic review and meta-analysis.

Meisam Moezzi1, Kiarash Shirbandi2, Hassan Kiani Shahvandi3, Babak Arjmand4, Fakher Rahim5.   

Abstract

Artificial intelligence (AI) systems have become critical in support of decision-making. This systematic review summarizes all the data currently available on the AI-assisted CT-Scan prediction accuracy for COVID-19. The ISI Web of Science, Cochrane Library, PubMed, Scopus, CINAHL, Science Direct, PROSPERO, and EMBASE were systematically searched. We used the revised Quality Assessment of Diagnostic Accuracy Studies (QUADAS-2) tool to assess all included studies' quality and potential bias. A hierarchical receiver-operating characteristic summary (HSROC) curve and a summary receiver operating characteristic (SROC) curve have been implemented. The area under the curve (AUC) was computed to determine the diagnostic accuracy. Finally, 36 studies (a total of 39,246 image data) were selected for inclusion into the final meta-analysis. The pooled sensitivity for AI was 0.90 (95% CI, 0.90-0.91), specificity was 0.91 (95% CI, 0.90-0.92) and the AUC was 0.96 (95% CI, 0.91-0.98). For deep learning (DL) method, the pooled sensitivity was 0.90 (95% CI, 0.90-0.91), specificity was 0.88 (95% CI, 0.87-0.88) and the AUC was 0.96 (95% CI, 0.93-0.97). In case of machine learning (ML), the pooled sensitivity was 0.90 (95% CI, 0.90-0.91), specificity was 0.95 (95% CI, 0.94-0.95) and the AUC was 0.97 (95% CI, 0.96-0.99). AI in COVID-19 patients is useful in identifying symptoms of lung involvement. More prospective real-time trials are required to confirm AI's role for high and quick COVID-19 diagnosis due to the possible selection bias and retrospective existence of currently available studies.
© 2021 Published by Elsevier Ltd.

Entities:  

Keywords:  Artificial intelligence; COVID-19; CT-Scan; Computed tomography; Coronavirus infections; Deep learning; Machine learning; Respiratory tract infections

Year:  2021        PMID: 33977119      PMCID: PMC8099790          DOI: 10.1016/j.imu.2021.100591

Source DB:  PubMed          Journal:  Inform Med Unlocked        ISSN: 2352-9148


New Coronaviruses-2019 Severe Acute Respiratory Syndrome Coronavirus 2 Coronavirus Disease-2019 Acute Lung injury Acute Respiratory Distress Syndrome Hyaluronic Acid Angiotensin-Converting Enzyme 2 Chest X-ray Radiography Computed Tomography-Scans Ground-Glass Opacity Artificial Intelligence Machine Learning Deep Learning Area Under the Curve Confidence Interval False Negative False Positive True Negative True Positive Quality Assessment of Diagnostic Accuracy Studies 2 Hierarchical Summary Receiver-Operating Characteristic Meta-analyses Of Observational Studies in Epidemiology Preferred Reporting Items for Systematic reviews and Meta-Analyses

Introduction

The 2019-new coronavirus (2019-nCoV, causing COVID-19 disease) was reported as the cause of the outbreak of pneumonia in Wuhan, Hubei province of China, at the end of 2019 [1]. This virus is associated with the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), a group of beta viruses that cause respiratory, gastrointestinal, neurological diseases in humans. The virus transmission appears to be done via respiratory droplets mainly [2]. COVID-19 patients usually present with trouble breathing, cough, and fever. The COVID-19- associated cytokine storms and innate immune system over-activation can lead to Acute Lung Injury (ALI) and induction of Acute Respiratory Distress Syndrome (ARDS), especially in patients with hypertension [3]. The cytokine storm induces the production of Hyaluronic Acid (HA) molecules in lung tissue, with consequent progressive fibrosis, tissue stiffness, and impaired lung function [4]. SARS-CoV-2 enters the cell by binding to spike (S) glycoproteins of the enzyme Angiotensin-Converting Enzyme 2 (ACE2) receptor [5,6]. Thus, pulmonary involvement is common in patients, and imaging techniques such as Chest X-ray Radiography (CXR) or Computed Tomography (CT-scans) are recommended as the first-line diagnostic tools [7]. Radiological manifestations clinically confirmed, such as unilateral or bilateral multilobar infiltration, Ground-Glass Opacity (GGO), and peripheral infiltration in chest CT-scan, have essential roles in the diagnosis of COVID-19 disease [8,9]. There is often no sign of lung involvement on a CT-scan in the early stages of the infection. In some cases, minimal involvement of up to two pulmonary lobes in the form of GGO, consolidation, or nodules less than one-third the volume of each lobe, especially in the peripheral areas [7,10]. Due to the removal and a high number of CT images of the lungs and its complex and uneven structure, it is challenging to diagnose vessels' nodules in patients' images [11]. Therefore, using computer-assisted techniques, especially Artificial Intelligence (AI) systems, has become more significant in supporting decision-making [12]. AI has great potential to improve clinical decisions; however, such systems' successful implementation requires careful attention to each information system's principles [13]. Due to the abundance and interference of variables in medical decisions, physicians can make faster and more efficient decisions using AI systems and spend more time evaluating decisions. So far only two systematic reviews and meta-analyses have been performed on AI in the COVID-19 field. Li et al. conducted a systematic review and meta-analysis of 151 published studies to generate a more accurate diagnostic model of COVID-19 using correlations between clinical variables, clustering COVID-19 patients into subtypes, and generating a computational classification model for discriminating between COVID-19 patients and influenza patients based on clinical variables alone [14]. Michelson et al. proposed an approach to answer clinical queries, termed rapid meta-analysis (RMA). Unlike traditional meta-analysis, it is an AI-based method with rapid time to production and reasonable data quality assurances. They performed a RMA on 11 studies and estimated the incidence of ocular toxicity as a side effect of hydroxychloroquine in COVID-19 patients [15]. Thus, the purpose of this meta-analysis was to systematically assess and summarize all of the data currently available on the prediction accuracy of AI-assisted CT-Scanning for COVID-19.

Materials and methods

Protocol and registration

This study was done according to Meta-analyses Of Observational Studies in Epidemiology (MOOSE) [16] and Preferred Reporting Items for Systematic reviews and Meta-Analyses (PRISMA) [17], and Synthesizing Evidence from Diagnostic Accuracy TEsts (SEDATE) [18] guidelines.

Eligibility criteria

Studies suggest that lung involvement in the confirmed cases of COVID-19 patients based on RT-PCR results without language limits were included. We excluded papers that did not fit into the study's conceptual framework focused on other types of infectious diseases.

Information sources

We systematically searched the ISI Web of Science, Cochrane Library, PubMed, Scopus, CINAHL, Science Direct, PROSPERO, and EMBASE for studies that evaluated the diagnostic accuracy of different models of AI-assisted CT-Scan for predict COVID-19 published between 2020 and 2021 years.

Search

Two reviewers (K.SH and F.R) performed the search using medical subject headings (MeSh) terms included “artificial neural network” OR “Artificial Intelligence” OR “Machine Learning” OR “expert system” OR “Deep Learning” OR “Supervised Machine Learning” OR “computer-aided” AND “Respiratory Tract Infections” OR “Respiratory System” OR “Coronavirus Infections” OR “COVID-19” OR “SARS COV 2 Infection” AND “Computed Tomography” OR “CT-Scan” and all possible combinations.

Summary measures

Our desired outcomes were sensitivity, specificity, positive predictive value (PPV), negative predictive value (NPV); studies that did not provide sufficient information to calculate true positive (TP, true COVID-19 predicted to be COVID-19 by AI), false positive (FP, non- COVID-19 predicted to be COVID-19), true negative (TN, non- COVID-19 predicted to be non- COVID-19 by AI) and false negative (FN, COVID-19 predicted to be non- COVID-19) values of AI on detection of COVID-19 in the patients, versus healthy control (HC). When the sensitivity and specificity were directly unavailable, we calculated them according to the following formulas: sensitivity = TP/ (TP + FN) and specificity = TN/ (FP + TN).

Risk of bias across studies

Data extraction for meta-analysis on detection of COVID-19 was based on the definition of criterion standard in the original study. Information including the year of publication, the country where the study was conducted, type of study, number of patients also retrieved. We used the revised Quality Assessment of Diagnostic Accuracy Studies (QUADAS-2) tool to assess the quality and potential bias of all studies by two independent reviewers (K.SH., F.R.) Any disagreements were resolved with discussion and involvement of the third reviewer (B.A.), and reviewers [K.SH., F.R.] assessed the first included articles independently. Four domains, namely patient selection, index test, reference standard, and flow and timing, were assessed. Two categories, including the risk of bias and applicability, were assessed under the domain of patient selection, index test, and reference standard. The risk of bias was assessed in the domain of flow and timing.

Additional analyses

We used a bivariate model of random effects to estimate sensitivity, accuracy, and 95% confidence intervals (CI). A hierarchical summary receiver operating characteristic (HSROC) curve and a summary receiver operating characteristic (SROC) curve have been mounted. All experiments were viewed with the HSROC curve as a circle and plotted. The overview point was depicted by a dot surrounded by a 95% trust area (95% CI). The area under the curve (AUC) was computed to determine the diagnostic accuracy. Approaches 1.0 to the AUC would mean outstanding results, and impaired performance would be suggested if it approaches 0.5. Among numerous subgroups, we compared the 95% CI of the AUC. We used non-overlapping 95% CI between two subgroups to identify statistically relevant variations. The variability and threshold effects of the studies included were also measured. Generally, the Chi-Square test of p < 0.1 reveals substantial heterogeneity performed was Cochran's Q statistics and I2 test. Spearman's correlation coefficient with r ≥ 0.6 between sensitivity and FP rate typically suggests a substantial threshold influence. We conducted both statistical studies using version 1.4 of the Meta-DiSc software [19] and the quality and potential bias of all studies by using Review Manager 5.4 (RevMan 5.4) [20].

Results

Study selection and characteristics

Finally, 886 studies were retrieved on the initial search, and 223 duplicates were removed. After reviewing the title, abstract and full article, finally, 36 studies were selected for inclusion into the meta-analysis [[21], [22], [23], [24], [25], [26], [27], [28], [29], [30], [31], [32], [33], [34], [35], [36], [37], [38], [39], [40], [41], [42], [43], [44], [45], [46], [47], [48], [49], [50], [51], [52], [53], [54], [55], [56], [57]] (Fig. 1 ). All included studies were retrospective, and all the studies were based on record images.
Fig. 1

PRISMA 2009 flow diagram.

PRISMA 2009 flow diagram. Based on the number of enrolled images, 32,857 images (19,623‬ COVID-19 images and 13,234 Healthy images) classified by analysis were included. The AI algorithm based on the neural network was established in a number of research articles [[21], [22], [23],[25], [26], [27],[29], [30], [31],[33], [34], [35], [36], [37],[41], [42], [43],47,48,[50], [51], [52], [53], [54], [55],57]. Among the included studies, twenty-nine models were selected for meta-analysis on DL assisted detection for predict COVID-19 [21,22,[25], [26], [27],30,[33], [34], [35], [36], [37],[40], [41], [42],46,47,[50], [51], [52], [53], [54],56,57] and fourteen models on ML assisted detection for predict COVID-19 [21,24,28,31,38,43,45,46,48,49] (Table 1 ).
Table 1

Characteristics of included studies on various models in patients with COVID-19.

Country/IDCountryExpert Radiologists involved as controlAI modelReference standardChest CT images
Diagnosis factors
PositiveHealthy samplesAccuracy, %AUROCPPVNPVSen.Spec.
Kelei He et al., 2021 [1]ChinaYesDLRT-PCR666NA0.9850.9910.799NA0.783NA
Ziwei Zhu et al., 2021 [2]ChinaYesDLRT-PCR6873950.930.93NANA0.930.92
Vruddhi Shah et al., 2021 [3]IndiaYesDLRT-PCR738NA0.821NANANANANA
Carlos Quiroz et al., 2021 [4]AustraliaYesMLRT-PCR346NANA0.926NANA0.8180.901
H Alshazly et al., 2021 [5]GermanyYesDLRT-PCR125212300.994NANANA0.9980.996
Mohit Agarwal et al., 2021 [6]IndiaYesDLRT-PCR7059900.9940.991NANA0.990.985
ML0.9940.988NANA0.990.985
DL0.7180.714NANA0.8020.630
DL0.9150.913NANA0.9380.888
DL0.8590.852NANA0.8950.810
DL0.8740.871NANA0.9150.826
DL0.9090.893NANA0.9370.864
DL0.870.861NANA0.9140.815
ML0.9580.948NANA0.9690.943
Xi Fang et al., 2021 [7]USAYesDLRT-PCR193NANA0.813NANANANA
Kumar Mishra et al., 2020 [8]IndiaYesDLRT-PCR3603970.88340.8832NANA0.88130.9051
Jun Chen et al., 2020 [9]ChinaYesDLRT-PCR6366910.9524NANANA10.9355
Liang Sun et al., 2020 [10]ChinaYesDLRT-PCR149510270.91790.9635NANA0.93050.8995
S Carvalho et al., 2020 [11]PortugalYesDLRT-PCR130NA0.820.90NANA0.800.86
Lu-Shan Xiao et al., 2020 [12]ChinaYesDLRT-PCR408NA0.9740.987NANANANA
Kimura-Sandoval et al., 2020 [13]MexicoYesAIRT-PCR166NANA0.88NANA0.740.91
Hui-Bin Tan et al., 2020 [14]ChinaYesMLRT-PCRNANANA0.95NANA0.9870.984
Liping Fu et al., 2020 [15]ChinaYesMLRT-PCR64NANA0.833NANA0.80950.7442
Kang Zhang et al., 2020 [16]ChinaYesAIRT-PCR752697.084110.9050NANA0.86670.8226
Quan Cai et al., 2020 [17]ChinaYesMLRT-PCR811220.7090.811NANA0.7650.625
D Javor et al., 2020 [18]AustriaYesDLRT-PCR3102NANA0.956NANA0.8440.933
Daowei Li et al., 2020 [19]ChinaYesDLRT-PCR1036NA0.68NANANANA
Hoon Ko et al., 2020 [20]KoreaYesDLRT-PCR3379980.99871NANA0.99581
Xueyan Mei et al., 2020 [21]USAYesDLRT-PCR4194860.7960.86NANA0.8360.759
Xinggang Wang et al., 2020 [22]ChinaYesDLRT-PCR3132290.9010.959NANA0.950.95
Xiangjun Wu et al., 2020 [23]ChinaYesDLRT-PCR2941010.8190.76NANA0.8110.615
Shuo Wang et al., 2020 [24]ChinaYesDLRT-PCR5601490.81240.90NANA0.78930.8993
Lin Li et al., 2020 [25]ChinaYesDLRT-PCR12961325NA0.96NANA0.900.96
A. Harmon et al., 2020 [26]USAYesAIRT-PCR102916950.9080.949NANA0.840.93
Chenglong Liu et al., 2020 [27]ChinaYesMLRT-PCR73270.94160.99NANA0.88621
Harrison X. Bai et al., 2020 [28]ChinaYesAIRT-PCR5216650.960.95NANA0.950.96
A. Sakagianni et al., 2020 [29]GreeceYesMLRT-PCR3493970.9320.94NANA0.88310.8831
Deepika Selvaraj et al., 2020 [30]IndiaYesMLRT-PCR50NA0.8860.8723NANA0.55490.8988
ML0.8330.9107NANA0.40250.9735
ML0.8820.8187NANA0.52110.8950
ML0.930.94NANA0.7560.9593
DL0.9380.9427NANA0.76780.9285
Yuehua Li et al., 2020 [31]ChinaYesDLRT-PCR148NA0.6260.660NANA0.58970.6429
Fei Shan et al., 2020 [32]ChinaYesMLRT-PCR249NA0.916NANANANANA
Minghuan Wang et al., 2020 [33]ChinaYesDLRT-PCR1647800NA0.9530.7900.9480.9230.851
H–W Ren et al., 2020 [34]ChinaYesAIRT-PCR58NANA0.740NANA0.9120.588
Zhang Li et al., 2020 [35]ChinaYesDLRT-PCR204164NA0.97NANANANA
Jiantao Pu et al., 2020 [36]USAYesDLRT-PCR151498NA0.70NANANANA
Fengjun Liu et al., 2020 [37]USAYesAIRT-PCR134115NA0.84NANANANA

False Positive (FP), False Negative (FN), True Negative (TN), True Positive (TP), Area Under the Curve (AUC), Deep Learning (DL), Machine Learning (ML), convolution neural network (CNN), artificial neural network (ANN), Decision tree (DT), and random forest (RF), artificial neural network (ANN), Tree-based pipeline optimization tool (TPOT), ensemble of bagged tree (EBT), support vector machine (SVM), Gaussian Naive Bayes (GNB), Logistic Regression (LR), Deep Neural Network (DNN),

Characteristics of included studies on various models in patients with COVID-19. False Positive (FP), False Negative (FN), True Negative (TN), True Positive (TP), Area Under the Curve (AUC), Deep Learning (DL), Machine Learning (ML), convolution neural network (CNN), artificial neural network (ANN), Decision tree (DT), and random forest (RF), artificial neural network (ANN), Tree-based pipeline optimization tool (TPOT), ensemble of bagged tree (EBT), support vector machine (SVM), Gaussian Naive Bayes (GNB), Logistic Regression (LR), Deep Neural Network (DNN),

Risk of bias within studies

In the final part, 31 studies had a low risk of bias in patient selection, while 5 studies had a high risk of bias (Supplementary Fig. 1). In terms of the patient selection, two studies [21,46] used multiple tests, including (DL, and ML). Overall, studies with high risk [39,44,48,55,58] in at least one of the seven domains were rated as low methodological quality in the subgroup analysis.

Diagnostic test accuracy (DTA)

Results of AI

Among the 37 studies [[21], [22], [23], [24], [25], [26], [27], [28], [29], [30], [31], [32], [33], [34], [35], [36], [37], [38], [39], [40], [41], [42], [43], [44], [45], [46], [47], [48], [49], [50], [51], [52], [53], [54], [55], [56], [57]] of image-based analysis, the pooled sensitivity was 0.90 (95% CI, 0.90–0.91), specificity was 0.90 (95% CI, 0.90–0.91), the AUC was 0.96 (95% CI, 0.91–0.98), and diagnostic odds ratio (DOR) was 88.98 (95% CI, 56.38–140.44) as shown in (Fig. 2 ) (Supplementary Figs. 2–8).
Fig. 2

The summary receiver-operating characteristic (SROC) curves of the diagnostic performance of AI and CT-Scan on detection. Significant difference was present when the 95% confidence regions.

The summary receiver-operating characteristic (SROC) curves of the diagnostic performance of AI and CT-Scan on detection. Significant difference was present when the 95% confidence regions.

Results of DL

Among the 23 studies [21,22,[25], [26], [27],30,31,[33], [34], [35], [36], [37],[40], [41], [42],46,47,[50], [51], [52], [53], [54],56,57] of image-based analysis, the pooled sensitivity was 0.91 (95% CI, 0.90–0.91), specificity was 0.88 (95% CI, 0.87–0.89), the AUC was 0.96 (95% CI, 0.93–0.97), and DOR was 99.04 (95% CI, 54.68–179.36) as shown in (Fig. 3 ) (Supplementary Figs. 3–8).
Fig. 3

The summary receiver-operating characteristic (SROC) curves of the diagnostic performance of DL and CT-Scan on detection. Significant difference was present when the 95% confidence regions.

The summary receiver-operating characteristic (SROC) curves of the diagnostic performance of DL and CT-Scan on detection. Significant difference was present when the 95% confidence regions.

Results of ML

Among the 9 studies [21,24,28,38,43,45,46,48,49] of image-based analysis, the pooled sensitivity was 0.91 (95% CI, 0.90–0.91), specificity was 0.95 (95% CI, 0.94–0.95), the AUC was 0.97 (95% CI, 0.96–0.99), and DOR was 88.27 (95% CI, 29.52–263.96) as shown in (Fig. 4 ) (Supplementary Figs. 4–8).
Fig. 4

The summary receiver-operating characteristic (SROC) curves of the diagnostic performance of ML and CT-Scan on detection. Significant difference was present when the 95% confidence regions.

The summary receiver-operating characteristic (SROC) curves of the diagnostic performance of ML and CT-Scan on detection. Significant difference was present when the 95% confidence regions.

Discussion

This meta-analysis study exhibited a satisfactory performance using the AI algorithm for AI assisted CT-Scan identification of COVID-19 vs. healthy samples. We showed that AI was accurate on the lung involvement in the COVID-19 with a pooled sensitivity was 0.90 (95% CI, 0.90–0.91), specificity was 0.90 (95% CI, 0.90–0.91) and the AUC was 0.96 (95% CI, 0.91–0.98). According to Table 2 , ResNet-50, ResNet101, ensemble of bagged tree (EBT), Tree-based pipeline optimization tool (TPOT), Gaussian Naive Bayes (GNB), random forest (RF), and convolution neural network (CNN) algorithms had performed good on the CT-based COVID-19 detection.
Table 2

A detailed information of used AI-models to detect and Classified COVID- 19 by Compressed Chest CT Image.

Country/IDMethodInputOutputAlgorithm namesPerformance evaluationTraining/test splittingTransfer learning / ab initio trainingNetwork Architecture
Kelei He et al., 2021 [1]DLThe raw 3D CT imageThe lung segmentation and severity assessment of COVID19 patientsmulti-task multi-instance U-Net (M2UNet)A five-fold cross-validation strategy usedOne subset as the testing set (20%)/ Four subsets are combined to construct the training set (70%) and validation set (10%)Synergistic LearningA bag (consisting of a set of 2D image patches) as the input data.M2UNet employs an encoding module for patch-level feature extraction
Ziwei Zhu et al., 2021 [2]DLThe raw 3D CT imageThe lung segmentation and severity assessment of COVID19 patientsKeras platform based on ResNet50 architecturetraining set, validation set and testing setOne subset as the training set, one subset as validation set, and one subset as testing setTransfer learning to detect the patients with COVID-19Imagenet dataset, Newly initialized weights, Output
Vruddhi Shah et al., 2021 [3]DLThe raw 3D CT imageThe lung segmentation and severity assessment of COVID19 patientsResNet-50The confusion matrixA training set, validation set, and test set with a splitA pre-trained networkVGG-19 architecture
Carlos Quiroz et al., 2021 [4]MLCT slices with <3 mm2 of lung tissueThe lung segmentation and severity assessment of COVID19 patientsEfficientNetB7 U-Net5-fold repeated stratified cross-validation--A 4-layer, fully connected architecture
H Alshazly et al., 2021 [5]DLChest CT scansThe lung segmentation and severity assessment of COVID19 patientsResNet50 and ResNet101K-fold cross-validationAbout 600 images only, and the test fold has less than 200 imagesTransfer learning to detect the patients with COVID-19; which data are scarceThe deep CNN architectures
Mohit Agarwal et al., 2021 [6]DL, MLChest CT scansThe lung segmentation and severity assessment of COVID19 patientsCNN, RF, VGG16, DenseNet121, DenseNet169, DenseNet201, MobileNet, ANN, DTK-fold cross-validationK10 protocol (90% training and 10% testing)VGG16, DenseNet121, DenseNet169, DenseNet201 and MobileNetBased CNN thus has a total of 7 layers mainly adapting for simplicity
Xi Fang et al., 2021 [7]DLChest CT scansThe lung segmentation and severity assessment of COVID19 patientsU-NetCross-dataset validation (training on Site A and testing on Site B; training on Site B and testing on Site A)Labeled all five pulmonary lobes in 71 CT volumes from Site A using chest imaging platform--
Kumar Mishra et al., 2020 [8]DLChest CT scansThe lung segmentation and severity assessment of COVID19 patientsResNet50-Split 80% of the data is kept for training purpose (training data) and the rest for testing (testing data)-Indicate the potential usage of various Deep CNN architectures
Jun Chen et al., 2020 [9]DLChest CT scansThe lung segmentation and severity assessment of COVID19 patientsUNet++-35,355 images were selected and split into training and retrospectively testing datasets.-UNet++ consists of encoder and decoder connecting through a series of nested dense convolutional blocks.
Liang Sun et al., 2020 [10]DLChest CT scansThe lung segmentation and severity assessment of COVID19 patientsVB-Net-Adaptive Feature Selection guided Deep Forest (AFS-DF)-Selection guided deep forest
S Carvalho et al., 2020 [11]DLChest CT scansThe lung segmentation and severity assessment of COVID19 patientsANNMinimization of the cross-entropyValidation (150 ROIs), and test (150 ROIs)-60 neurons in a single-hidden-layer architecture
Lu-Shan Xiao et al., 2020 [12]DLChest CT scansThe lung segmentation and severity assessment of COVID19 patientsResNet34Five-fold cross-validationPatch dataset with a size as large as 3 × 224 × 224 (z × y × x)-ResNet34, AlexNet, VGGNet, and DenseNet
Kimura-Sandoval et al., 2020 [13]AIChest CT scansThe lung segmentation and severity assessment of COVID19 patientsLogistic----
Hui-Bin Tan et al., 2020 [14]MLChest CT scansThe lung segmentation and severity assessment of COVID19 patientsTPOTRadiomics Auto-ML model in the first CT imagesTraining set and test set according to the proportion of 8:2-Auto-ML, each group's original data is imported into TPOT
Liping Fu et al., 2020 [15]MLChest CT scansThe lung segmentation and severity assessment of COVID19 patientsK(K-1)/2 binary-One-leave-out cross-validation--
Kang Zhang et al., 2020 [16]AIChest CT scansThe lung segmentation and severity assessment of COVID19 patientsResNet-18A five-fold cross-validation testRandomly assigned to a training set (80%), an internal validation set (10%) or a test set (10%)-A computer-aided diagnosis (CAD) system for detecting COVID-19 patients
Quan Cai et al., 2020 [17]MLChest CT scansThe lung segmentation and severity assessment of COVID19 patients--7:3 ratio to either the training cohort or the testing cohort--
D Javor et al., 2020 [18]DLChest CT scansThe lung segmentation and severity assessment of COVID19 patientsResNet50-Split for training the model and internal validation (20 % of the samples)-More layers (ResNet-101)
Daowei Li et al., 2020 [19]DLChest CT scansThe lung segmentation and severity assessment of COVID19 patientsU-Net----
Hoon Ko et al., 2020 [20]DLChest CT scansThe lung segmentation and severity assessment of COVID19 patientsResNet-505-fold cross-validationRandomly split with a ratio of 8:2 into a training set and a testing setOn one of the following four pretrained CNNInitially used the predefined weights for each CNN architecture
Xueyan Mei et al., 2020 [21]DLChest CT scansThe lung segmentation and severity assessment of COVID19 patients-----
Xinggang Wang et al., 2020 [22]DLChest CT scansThe lung segmentation and severity assessment of COVID19 patientsUNet-A simple 2D UNet using the CT images in our training set-3D deep convolutional neural Network to Detect COVID-19 (DeCoVNet) from CT volumes.
Xiangjun Wu et al., 2020 [23]DLChest CT scansThe lung segmentation and severity assessment of COVID19 patientsResNet50The layer outputs the risk value of COVID-19 pneumonia50 cases (10%, 37 of COVID-19, 13 of other pneumonia) of the validation set and 50 cases (10%, 37 of COVID-19, 13 of other pneumonia) of the testing set.-Modification of ResNet50 architecture
Shuo Wang et al., 2020 [24]DLChest CT scansThe lung segmentation and severity assessment of COVID19 patientsCOVID-19NetTrain and externally validate the performanceThe auxiliary training setThe pre-trained COVID-19Net to the COVID-19 dataset to specifically-
Lin Li et al., 2020 [25]DLChest CT scansThe lung segmentation and severity assessment of COVID19 patientsCOVID-19NetUsing an independent testing set. COVNet = COVID-19 detection neural network.A ratio of 9:1 into a training set and an independent testing set at the patient level.-A supervised deep learning framework (COVNet) was developed to detect COVID-19 and community acquired pneumonia.
A. Harmon et al., 2020 [26]AIChest CT scansThe lung segmentation and severity assessment of COVID19 patientsAH-Net---Densnet-121 architecture adapted to utilize 3D operations (i.e., 3D convolutions) compared to original 2D implementation
Chenglong Liu et al., 2020 [27]MLChest CT scansThe lung segmentation and severity assessment of COVID19 patientsEBTSVM, LR, DT, KNN are implemented with the same texture feature extraction---
Harrison X. Bai et al., 2020 [28]AIChest CT scansThe lung segmentation and severity assessment of COVID19 patientsEfficientNet B4---EfficientNet B4 deep neural network architecture
A. Sakagianni et al., 2020 [29]MLChest CT scansThe lung segmentation and severity assessment of COVID19 patients-----
Deepika Selvaraj et al., 2020 [30]DL, MLChest CT scansThe lung segmentation and severity assessment of COVID19 patientsSVM, GNB, LR, DT, DNN50 images are used for testing the trained networkThe dataset of training points is manually selected from the infected and background pixels from the 30 training images-The size of the input layer is 38 neurons (38 features), three hidden layers with 58 neurons per layer and binary classification output layer
Yuehua Li et al., 2020 [31]DLChest CT scansThe lung segmentation and severity assessment of COVID19 patientsU-NetThe Dice coefficient---
Fei Shan et al., 2020 [32]MLChest CT scansThe lung segmentation and severity assessment of COVID19 patientsVB-Net----
Minghuan Wang et al., 2020 [33]DLChest CT scansThe lung segmentation and severity assessment of COVID19 patientsU-Net-Randomly split into a training set (1318 patients with COVID-19; 640 patients without COVID-19) and a testing set (329 patients with COVID-19; 160 patients without COVID-19)--
H–W Ren et al., 2020 [34]AIChest CT scansThe lung segmentation and severity assessment of COVID19 patients-----
Zhang Li et al., 2020 [35]DLChest CT scansThe lung segmentation and severity assessment of COVID19 patientsU-Net----
Jiantao Pu et al., 2020 [36]DL3D Chest CT scansThe lung segmentation and severity assessment of COVID19 patientsCNN---The CNN architectures used different numbers of filters at different layers.
Fengjun Liu et al., 2020 [37]AIChest CT scansThe lung segmentation and severity assessment of COVID19 patients-----

False Positive (FP), False Negative (FN), True Negative (TN), True Positive (TP), Area Under the Curve (AUC), Deep Learning (DL), Machine Learning (ML), convolution neural network (CNN), artificial neural network (ANN), Decision tree (DT), and random forest (RF), artificial neural network (ANN), Tree-based pipeline optimization tool (TPOT), ensemble of bagged tree (EBT), support vector machine (SVM), Gaussian Naive Bayes (GNB), Logistic Regression (LR), Deep Neural Network (DNN),

A detailed information of used AI-models to detect and Classified COVID- 19 by Compressed Chest CT Image. False Positive (FP), False Negative (FN), True Negative (TN), True Positive (TP), Area Under the Curve (AUC), Deep Learning (DL), Machine Learning (ML), convolution neural network (CNN), artificial neural network (ANN), Decision tree (DT), and random forest (RF), artificial neural network (ANN), Tree-based pipeline optimization tool (TPOT), ensemble of bagged tree (EBT), support vector machine (SVM), Gaussian Naive Bayes (GNB), Logistic Regression (LR), Deep Neural Network (DNN), The lesions could explain AI's excellent performance in detecting COVID-19 with the handle, bronchial vascularization, or lower extremities in bilateral lungs [59]. In contrast, AUC of ML detecting COVID-19 patients was 0.97 (95% CI, 0.96–0.99). However, the AUC of DL on detecting of COVID-19 patients was 0.96 (95% CI, 0.93–0.97). Thus, it may increase the AI, ML, and DL models' close diagnosis to detect COVID-19. The AI system demonstrated performance comparable to senior practicing radiologists and can help to diagnose COVID-19 patients rapidly with 0.97 and 0.95 AUC [23,55]. Consequently, AI software expressing objective evaluations of the percentage of ventilated lung parenchyma compared to the affected one and can readily identify CT-scans with COVID-19 associated pneumonia [58,60]. Ilker Ozsahin et al., 2020, in the review study, showed that AI to be used in the clinic as a supportive system for physicians in detecting COVID-19 [61]. Also, pooled AUC in this study was 0.96 (95% CI, 0.91–0.98). Lin Li et al., 2020, showed that the DL model with 0.96 AUC could accurately detect COVID-19 and differentiate it from Community-Acquired Pneumonia (CAP) and other lung conditions [35]. In contrast, Xiangjun Wu et al., 2020, Xueyan Mei et al., 2020, and Shuo Wang et al., 2020, showed that DL model with 0.732, 0.86, and 0.87 AUC could accurately detect COVID-19, respectively [51,53,62]. However, one study was showed that chest CT-Scan with AI could not replace molecular diagnostic tests with a nasopharyngeal swab (RT-PCR) or suspected for COVID-19 patients [63]. Overall, analysis shows that the DL model can classify the chest CT-Scan at a high accuracy rate and AUC values ranging from 0.90 to 1.00 [33,52,64,65]. At the same time, this study showed that the AUC of DL on detecting COVID-19 patients was 0.96 (95% CI, 0.93–0.97), which was near the same results with the research studies. Daowei Li et al., 2020, showed that the AUR score of ML was 0.93 [34]. However, in our study, pooled AUC in ML was higher, 0.97 (95% CI, 0.96–0.99). Overall, ML's accuracy is almost achieved over 0.90 for COVID-19 classification [66], and Chenglong Liu et al., 2020, showed that AUC was 0.99 [38]. This meta-analysis has several limitations. 1. All studies were retrospective based on static images. 2. The selection bias of studies cannot be eliminated (shown in the QUADAS-2). 3. There were some heterogeneities in the CT-Scans equipment, images, and algorithm of AI, DL, and ML used. 4. Also, two studies used some algorithms and methods for AI, which was effect bias for this analysis.

Conclusion

Our findings revealed that AI-platforms based on the ResNet-50, ResNet101, an ensemble of the bagged tree, Tree-based pipeline optimization tool, Gaussian Naive Bayes, random forest, and convolution neural network algorithms perform well for CT-based COVID-19 detection. To confirm AI's role for rapid and accurate COVID-19 diagnosis, more prospective real-time trials are required due to reduce the possibility of selection bias and to compare with currently available studies.

Funding source, financial disclosures

Not have funding.

Contribute

Study concept and design: F.R, K.SH. Acquisition of data: F.R, K.SH. Analysis and interpretation of data. F.R. Drafting of the manuscript: K.SH, B.A. Critical review of manuscript: F.R, K.SH, H.K.SH.

Declaration of competing interest

The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.
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4.  Deep learning-based multi-view fusion model for screening 2019 novel coronavirus pneumonia: A multicentre study.

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Journal:  Eur J Radiol       Date:  2020-05-05       Impact factor: 3.528

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6.  Frequency and Distribution of Chest Radiographic Findings in Patients Positive for COVID-19.

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10.  Artificial intelligence for the detection of COVID-19 pneumonia on chest CT using multinational datasets.

Authors:  Stephanie A Harmon; Thomas H Sanford; Sheng Xu; Evrim B Turkbey; Holger Roth; Ziyue Xu; Dong Yang; Andriy Myronenko; Victoria Anderson; Amel Amalou; Maxime Blain; Michael Kassin; Dilara Long; Nicole Varble; Stephanie M Walker; Ulas Bagci; Anna Maria Ierardi; Elvira Stellato; Guido Giovanni Plensich; Giuseppe Franceschelli; Cristiano Girlando; Giovanni Irmici; Dominic Labella; Dima Hammoud; Ashkan Malayeri; Elizabeth Jones; Ronald M Summers; Peter L Choyke; Daguang Xu; Mona Flores; Kaku Tamura; Hirofumi Obinata; Hitoshi Mori; Francesca Patella; Maurizio Cariati; Gianpaolo Carrafiello; Peng An; Bradford J Wood; Baris Turkbey
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