Literature DB >> 33972644

Development of a Loop-mediated isothermal amplification (LAMP) technique for specific and early detection of Mycobacterium leprae in clinical samples.

Nupur Garg1, Upasana Sahu2, Sudeshna Kar3, Farhan J Ahmad4.   

Abstract

Leprosy, a progressive, mutilating and highly stigmatized disease caused by Mycobacterium leprae (ML), continues to prevail in the developing world. This is due to the absence of rapid, specific and sensitive diagnostic tools for its early detection since the disease gets notified only with the advent of physical scarring in patients. This study reports the development of a Loop-mediated isothermal amplification (LAMP) technique for fast, sensitive and specific amplification of 16S rRNA gene of ML DNA for early detection of leprosy in resource-limited areas. Various parameters were optimized to obtain robust and reliable amplification of ML DNA. Blind clinical validation studies were performed which showed that this technique had complete concurrence with conventional techniques. Total absence of amplification of negative control DNA confirmed the specificity of this test. Various visual detection methods viz. colorimetric, turbidity differentiation and bridge flocculation were standardized to establish easy-to-read and rapid diagnosis. This technique eliminates the lack of accuracy and sensitivity in skin smear tests in patients and the requirement for expensive lab equipments and trained technicians. The technique holds promise for further expansion and has the potential to cater to the unmet needs of society for a cheap, highly-sensitive and robust rapid diagnosis of ML.

Entities:  

Year:  2021        PMID: 33972644     DOI: 10.1038/s41598-021-89304-2

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  20 in total

1.  Accelerated reaction by loop-mediated isothermal amplification using loop primers.

Authors:  K Nagamine; T Hase; T Notomi
Journal:  Mol Cell Probes       Date:  2002-06       Impact factor: 2.365

Review 2.  Loop-mediated isothermal amplification (LAMP): A novel rapid detection platform for pathogens.

Authors:  Yanmei Li; Penghui Fan; Shishui Zhou; Li Zhang
Journal:  Microb Pathog       Date:  2017-03-18       Impact factor: 3.738

Review 3.  Leprosy now: epidemiology, progress, challenges, and research gaps.

Authors:  Laura C Rodrigues; Diana Nj Lockwood
Journal:  Lancet Infect Dis       Date:  2011-06       Impact factor: 25.071

4.  Use of the polymerase chain reaction in the diagnosis of leprosy.

Authors:  A R Santos; J C Nery; N C Duppre; M E Gallo; J T Filho; P N Suffys; W M Degrave
Journal:  J Med Microbiol       Date:  1997-02       Impact factor: 2.472

5.  LightCycler real-time PCR for rapid detection and quantitation of Mycobacterium leprae in skin specimens.

Authors:  Janisara Rudeeaneksin; Sopa Srisungngam; Pathom Sawanpanyalert; Thaverit Sittiwakin; Sirirat Likanonsakul; Supannee Pasadorn; Prasit Palittapongarnpim; Patrick J Brennan; Benjawan Phetsuksiri
Journal:  FEMS Immunol Med Microbiol       Date:  2008-09-08

6.  Detection of Mycobacterium leprae DNA by polymerase chain reaction in the blood and nasal secretion of Brazilian household contacts.

Authors:  Elza Carmen de Almeida; Alejandra Nóbrega Martinez; Viviane Câmara Maniero; Ana Maria Sales; Nádia C Duppre; Euzenir Nunes Sarno; Adalberto Rezende Santos; Milton Ozório Moraes
Journal:  Mem Inst Oswaldo Cruz       Date:  2004-11-03       Impact factor: 2.743

7.  Comparison of bacillary index on slit skin smear with bacillary index of granuloma in leprosy and its relevance to present therapeutic regimens.

Authors:  Sendhil M Kumaran; Ishwara P Bhat; J Madhukara; Pritilata Rout; J Elizabeth
Journal:  Indian J Dermatol       Date:  2015 Jan-Feb       Impact factor: 1.494

Review 8.  Recent Laboratory Advances in Diagnostics and Monitoring Response to Treatment in Leprosy.

Authors:  Utpal Sengupta
Journal:  Indian Dermatol Online J       Date:  2019 Mar-Apr

Review 9.  Loop-mediated isothermal amplification (LAMP): An advanced molecular point-of-care technique for the detection of Leishmania infection.

Authors:  Chukwunonso O Nzelu; Hirotomo Kato; Nathan C Peters
Journal:  PLoS Negl Trop Dis       Date:  2019-11-07

10.  Leprosy: a review of laboratory and therapeutic aspects--part 2.

Authors:  Joel Carlos Lastória; Marilda Aparecida Milanez Morgado de Abreu
Journal:  An Bras Dermatol       Date:  2014 May-Jun       Impact factor: 1.896

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  5 in total

1.  Polymerase chain reaction and loop-mediated isothermal amplification targeting lic13162, lic20239, and lipL32 genes for leptospirosis diagnosis.

Authors:  Violetta Dias Pacce; Margarida Neves Souza; Natasha Rodrigues de Oliveira; Frederico Schmitt Kremer; Sérgio Jorge; Nilo Ikuta; Vagner Ricardo Lunge; Odir Antônio Dellagostin
Journal:  Braz J Microbiol       Date:  2022-02-05       Impact factor: 2.214

Review 2.  A review of nutrition in neuropathic pain of leprosy.

Authors:  Michael Klowak; Andrea K Boggild
Journal:  Ther Adv Infect Dis       Date:  2022-06-01

3.  Development of Loop-Mediated Isothermal Amplification Rapid Diagnostic Assays for the Detection of Klebsiella pneumoniae and Carbapenemase Genes in Clinical Samples.

Authors:  Aurore C Poirier; Dai Kuang; Bianca S Siedler; Khushboo Borah; Jai W Mehat; Jialin Liu; Cui Tai; Xiaoli Wang; Arnoud H M van Vliet; Wei Ma; David R Jenkins; John Clark; Roberto M La Ragione; Jieming Qu; Johnjoe McFadden
Journal:  Front Mol Biosci       Date:  2022-02-09

Review 4.  Recent advances in loop-mediated isothermal amplification (LAMP) for rapid and efficient detection of pathogens.

Authors:  Nupur Garg; Farhan Jalees Ahmad; Sudeshna Kar
Journal:  Curr Res Microb Sci       Date:  2022-02-23

5.  Development of a Loop-Mediated Isothermal Amplification Assay Coupled With a Lateral Flow Dipstick Test for Detection of Myosin Binding Protein C3 A31P Mutation in Maine Coon Cats.

Authors:  Pratch Sukumolanan; Kanokwan Demeekul; Soontaree Petchdee
Journal:  Front Vet Sci       Date:  2022-03-07
  5 in total

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