| Literature DB >> 33962603 |
Behrooz Mamandipoor1, Fernando Frutos-Vivar2, Oscar Peñuelas2, Richard Rezar3, Konstantinos Raymondos4, Alfonso Muriel3,5, Bin Du6, Arnaud W Thille7, Fernando Ríos8, Marco González9, Lorenzo Del-Sorbo10, Maria Del Carmen Marín11, Bruno Valle Pinheiro12, Marco Antonio Soares13, Nicolas Nin14, Salvatore M Maggiore15, Andrew Bersten16, Malte Kelm17, Raphael Romano Bruno17, Pravin Amin18, Nahit Cakar19, Gee Young Suh20, Fekri Abroug21, Manuel Jibaja22, Dimitros Matamis23, Amine Ali Zeggwagh24, Yuda Sutherasan25, Antonio Anzueto26, Bernhard Wernly3, Andrés Esteban2, Christian Jung27, Venet Osmani1.
Abstract
BACKGROUND: Mechanical Ventilation (MV) is a complex and central treatment process in the care of critically ill patients. It influences acid-base balance and can also cause prognostically relevant biotrauma by generating forces and liberating reactive oxygen species, negatively affecting outcomes. In this work we evaluate the use of a Recurrent Neural Network (RNN) modelling to predict outcomes of mechanically ventilated patients, using standard mechanical ventilation parameters.Entities:
Keywords: Critical care medicine; ICU; Machine learning; Mechanical ventilation; Risk stratification
Mesh:
Year: 2021 PMID: 33962603 PMCID: PMC8102841 DOI: 10.1186/s12911-021-01506-w
Source DB: PubMed Journal: BMC Med Inform Decis Mak ISSN: 1472-6947 Impact factor: 2.796
Fig. 1Linear correlation of variables and the outcome (indicated by Discharge ICU). Note the correlation scale is in the interval − 0.2 to 0.2
(a) Baseline demographics of survivors versus non-survivors for all patients, (b) Baseline demographics of survivors versus non-survivors for patients admitted with respiratory disorders
| Variables | Survivors | Non-survivors | p-value |
|---|---|---|---|
| Female sex n (%) | 3298 (37) | 1452 (37) | |
| Age | 58.87 ± 17.55 | 63.65 ± 16.16 | < 0.01 |
| Weight | 75.36 ± 19.56 | 74.42 ± 19.32 | 0.01 |
| PBW | 62.17 ± 9.29 | 61.76 ± 9.31 | 0.02 |
| BMI | 26.56 ± 6.37 | 26.42 ± 6.29 | 0.25 |
| Creatinine | 1.38 ± 1.38 | 1.87 ± 1.66 | < 0.01 |
| Bilirubin | 1.51 ± 3.39 | 2.55 ± 5.32 | < 0.01 |
| pH | 7.40 ± 0.09 | 7.36 ± 0.12 | < 0.01 |
| PaCO2 | 39.96 ± 10.20 | 40.41 ± 11.81 | 0.15 |
| PaO2_FiO2 | 257.99 ± 106.03 | 220.47 ± 107.66 | < 0.01 |
| peakPressure | 23.98 ± 7.41 | 26.50 ± 7.89 | < 0.01 |
| plateauPressure | 19.40 ± 5.65 | 21.03 ± 6.46 | < 0.01 |
| drivingPressure | 12.64 ± 5.37 | 13.83 ± 6.13 | < 0.01 |
| appliedPEEP | 6.66 ± 3.13 | 7.19 ± 3.60 | < 0.01 |
| tidalVolume | 509.42 ± 118.72 | 498.82 ± 115.99 | < 0.01 |
| tidalvolume/PBW | 8.30 ± 1.99 | 8.21 ± 2.13 | < 0.01 |
| SAPS_II | 42.71 ± 17.04 | 55.08 ± 19.05 | < 0.01 |
| Propensity test | 0.63 ± 0.03 | 0.63 ± 0.03 | < 0.01 |
| LOS in ICU | 13.02 ± 13.45 | 11.70 ± 14.27 | < 0.01 |
| MV_days | 8.41 ± 8.56 | 9.08 ± 10.10 | < 0.01 |
| Female sex n (%) | 653 (38) | 340 (35) | |
| Age | 61.16 ± 17.19 | 63.94 ± 15.47 | < 0.01 |
| Weight | 74.58 ± 23.13 | 71.80 ± 21.28 | < 0.01 |
| PBW | 61.06 ± 9.33 | 61.32 ± 9.36 | 0.49 |
| BMI | 26.64 ± 7.80 | 25.58 ± 6.94 | < 0.01 |
| Creatinine | 1.27 ± 1.14 | 1.75 ± 1.58 | < 0.01 |
| Bilirubin | 1.44 ± 2.99 | 2.13 ± 4.66 | 0.01 |
| pH | 7.39 ± 0.09 | 7.35 ± 0.12 | < 0.01 |
| PaCO2 | 44.62 ± 13.13 | 45.14 ± 13.88 | 0.12 |
| PaO2_FiO2 | 218.65 ± 94.10 | 178.84 ± 92.50 | < 0.01 |
| peakPressure | 26.49 ± 8.13 | 29.07 ± 8.27 | < 0.01 |
| plateauPressure | 21.41 ± 6.18 | 23.03 ± 6.75 | < 0.01 |
| drivingPressure | 13.77 ± 5.80 | 14.70 ± 6.73 | < 0.01 |
| appliedPEEP | 7.52 ± 3.77 | 8.27 ± 4.02 | < 0.01 |
| tidalVolume | 478.62 ± 122.74 | 481.34 ± 121.99 | < 0.01 |
| tidalvolume/PBW | 7.95 ± 2.15 | 7.97 ± 2.09 | < 0.01 |
| SAPS_II | 43.37 ± 16.27 | 51.02 ± 18.30 | < 0.01 |
| Propensity test | 0.64 ± 0.03 | 0.64 ± 0.03 | < 0.01 |
| LOS in ICU | 15.72 ± 15.93 | 13.78 ± 15.74 | < 0.01 |
| MV_days | 10.20 ± 10.51 | 10.48 ± 10.77 | 0.52 |
Fig. 2Panel a. Predictive performance (AUC and AUPRC) of our LSTM-based model versus Random Forrest (RF) and Logistic Regression (LR) for the overall patient dataset using six standard mechanical ventilation parameters. Panel b. Predictive performance of our LSTM-based model versus Random Forrest (RF) and Logistic Regression (LR) for the subgroup of patients admitted with respiratory disorders using six standard mechanical ventilation parameters. Confidence intervals are shown in grey for both panels
(a) Performance of the models for the overall patient dataset using six standard mechanical ventilation parameters, (b) Performance of the models for the subgroup of patients admitted with respiratory disorders using six standard mechanical ventilation parameters
| AUC | AP | PPV | NPV | MCC | |
|---|---|---|---|---|---|
| LR | 0.65 ± 0.01 | 0.46 ± 0.01 | 0.50 ± 0.02 | 0.74 ± 0.01 | 0.21 ± 0.01 |
| RF | 0.69 ± 0.01 | 0.52 ± 0.01 | 0.51 ± 0.02 | 0.76 ± 0.01 | 0.26 ± 0.01 |
| LSTM | |||||
| LR | 0.67 ± 0.02 | 0.54 ± 0.03 | 0.54 ± 0.03 | 0.74 ± 0.01 | 0.28 ± 0.03 |
| RF | 0.71 ± 0.02 | 0.60 ± 0.02 | 0.54 ± 0.04 | 0.76 ± 0.02 | 0.31 ± 0.06 |
| LSTM | |||||
Highest performance is shown in bold
Fig. 3Panel a. Predictive performance (AUC and AUPRC) of our LSTM-based model versus Random Forrest (RF) and Logistic Regression (LR) for the overall patient dataset, including also variables related to kidney and liver function. Panel b. Predictive performance of our LSTM-based model versus Random Forrest (RF) and Logistic Regression (LR) for the subgroup of patients admitted with respiratory disorders, including also variables related to kidney and liver function. Confidence intervals are shown in grey for both panels
(a) Performance of the models for the overall patient dataset, by also including variables related to kidney and liver function, (b) Performance of the models for the subgroup of patients admitted with respiratory disorders, by also including variables related to kidney and liver function
| AUC | AP | PPV | NPV | MCC | |
|---|---|---|---|---|---|
| LR | 0.72 ± 0.02 | 0.57 ± 0.03 | 0.58 ± 0.03 | 0.78 ± 0.01 | 0.34 ± 0.03 |
| RF | 0.76 ± 0.02 | 0.63 ± 0.02 | 0.80 ± 0.01 | 0.38 ± 0.03 | |
| LSTM | |||||
| LR | 0.73 ± 0.01 | 0.61 ± 0.01 | 0.58 ± 0.03 | 0.77 ± 0.02 | 0.35 ± 0.03 |
| RF | 0.69 ± 0.04 | 0.61 ± 0.05 | 0.41 ± 0.06 | ||
| LSTM | |||||
Highest performance is shown in bold
Fig. 4Variable importance ranking for each LSTM model: a) All patients, and b) patients admitted with respiratory disorders
Fig. 5Calibration plots for each LSTM model: All patients (left) and patients admitted with respiratory disorders (right)