Literature DB >> 33961099

A deep dive into the RecQ interactome: something old and something new.

Robert H Simmons1, Cody M Rogers1,2, Matthew L Bochman3.   

Abstract

RecQ family helicases are found in all domains of life and play roles in multiple processes that underpin genomic integrity. As such, they are often referred to as guardians or caretakers of the genome. Despite their importance, however, there is still much we do not know about their basic functions in vivo, nor do we fully understand how they interact in organisms that encode more than one RecQ family member. We recently took a multi-omics approach to better understand the Saccharomyces cerevisiae Hrq1 helicase and its interaction with Sgs1, with these enzymes being the functional homologs of the disease-linked RECQL4 and BLM helicases, respectively. Using synthetic genetic array analyses, immuno-precipitation coupled to mass spectrometry, and RNA-seq, we found that Hrq1 and Sgs1 likely participate in many pathways outside of the canonical DNA recombination and repair functions for which they are already known. For instance, connections to transcription, ribosome biogenesis, and chromatin/chromosome organization were uncovered. These recent results are briefly detailed with respect to current knowledge in the field, and possible follow-up experiments are suggested. In this way, we hope to gain a wholistic understanding of these RecQ helicases and how their mutation leads to genomic instability.
© 2021. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

Entities:  

Keywords:  BLM; DNA helicase; Hrq1; RECQL4; RecQ; Sgs1

Mesh:

Substances:

Year:  2021        PMID: 33961099      PMCID: PMC9274705          DOI: 10.1007/s00294-021-01190-3

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   2.695


  59 in total

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Authors:  R Wolter; W Siede; M Brendel
Journal:  Mol Gen Genet       Date:  1996-02-05

2.  RECQL4, the protein mutated in Rothmund-Thomson syndrome, functions in telomere maintenance.

Authors:  Avik K Ghosh; Marie L Rossi; Dharmendra Kumar Singh; Christopher Dunn; Mahesh Ramamoorthy; Deborah L Croteau; Yie Liu; Vilhelm A Bohr
Journal:  J Biol Chem       Date:  2011-10-28       Impact factor: 5.157

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Authors:  S W Matson; D W Bean; J W George
Journal:  Bioessays       Date:  1994-01       Impact factor: 4.345

4.  Selective ploidy ablation, a high-throughput plasmid transfer protocol, identifies new genes affecting topoisomerase I-induced DNA damage.

Authors:  Robert J D Reid; Sergio González-Barrera; Ivana Sunjevaric; David Alvaro; Samantha Ciccone; Marisa Wagner; Rodney Rothstein
Journal:  Genome Res       Date:  2010-12-20       Impact factor: 9.043

5.  RECQL4 localizes to mitochondria and preserves mitochondrial DNA integrity.

Authors:  Deborah L Croteau; Marie L Rossi; Chandrika Canugovi; Jane Tian; Peter Sykora; Mahesh Ramamoorthy; Zheng Ming Wang; Dharmendra Kumar Singh; Mansour Akbari; Rajesh Kasiviswanathan; William C Copeland; Vilhelm A Bohr
Journal:  Aging Cell       Date:  2012-03-02       Impact factor: 9.304

Review 6.  Human RECQ helicases: roles in DNA metabolism, mutagenesis and cancer biology.

Authors:  Raymond J Monnat
Journal:  Semin Cancer Biol       Date:  2010-10-08       Impact factor: 15.707

Review 7.  DNA secondary structures: stability and function of G-quadruplex structures.

Authors:  Matthew L Bochman; Katrin Paeschke; Virginia A Zakian
Journal:  Nat Rev Genet       Date:  2012-10-03       Impact factor: 53.242

8.  Y'-Help1, a DNA helicase encoded by the yeast subtelomeric Y' element, is induced in survivors defective for telomerase.

Authors:  M Yamada; N Hayatsu; A Matsuura; F Ishikawa
Journal:  J Biol Chem       Date:  1998-12-11       Impact factor: 5.157

9.  Genome-wide requirements for resistance to functionally distinct DNA-damaging agents.

Authors:  William Lee; Robert P St Onge; Michael Proctor; Patrick Flaherty; Michael I Jordan; Adam P Arkin; Ronald W Davis; Corey Nislow; Guri Giaever
Journal:  PLoS Genet       Date:  2005-08-19       Impact factor: 5.917

10.  Atomic structures and functional implications of the archaeal RecQ-like helicase Hjm.

Authors:  Takuji Oyama; Hayato Oka; Kouta Mayanagi; Tsuyoshi Shirai; Kyoko Matoba; Ryosuke Fujikane; Yoshizumi Ishino; Kosuke Morikawa
Journal:  BMC Struct Biol       Date:  2009-01-22
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  1 in total

1.  Bulk phase biochemistry of PIF1 and RecQ4 family helicases.

Authors:  Prasangi Rajapaksha; Robert H Simmons; Spencer J Gray; David J Sun; Phoebe Nguyen; David G Nickens; Matthew L Bochman
Journal:  Methods Enzymol       Date:  2022-04-09       Impact factor: 1.682

  1 in total

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