Literature DB >> 33951597

Personalising left-ventricular biophysical models of the heart using parametric physics-informed neural networks.

Stefano Buoso1, Thomas Joyce2, Sebastian Kozerke2.   

Abstract

We present a parametric physics-informed neural network for the simulation of personalised left-ventricular biomechanics. The neural network is constrained to the biophysical problem in two ways: (i) the network output is restricted to a subspace built from radial basis functions capturing characteristic deformations of left ventricles and (ii) the cost function used for training is the energy potential functional specifically tailored for hyperelastic, anisotropic, nearly-incompressible active materials. The radial bases are generated from the results of a nonlinear Finite Element model coupled with an anatomical shape model derived from high-resolution cardiac images. We show that, by coupling the neural network with a simplified circulation model, we can efficiently generate computationally inexpensive estimations of cardiac mechanics. Our model is 30 times faster than the reference Finite Element model used, including training time, while yielding satisfactory average errors in the predictions of ejection fraction (-3%), peak systolic pressure (7%), stroke work (4%) and myocardial strains (14%). This physics-informed neural network is well suited to efficiently augment cardiac images with functional data and to generate large sets of synthetic cases for training deep network classifiers while it provides efficient personalization to the specific patient of interest with a high level of detail.
Copyright © 2021 The Author(s). Published by Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Finite elements; Machine learning; Personalised cardiac mechanics; Physics informed neural networks; Reduced-order models; Shape model

Year:  2021        PMID: 33951597     DOI: 10.1016/j.media.2021.102066

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  5 in total

Review 1.  Machine Learning for Cardiovascular Biomechanics Modeling: Challenges and Beyond.

Authors:  Amirhossein Arzani; Jian-Xun Wang; Michael S Sacks; Shawn C Shadden
Journal:  Ann Biomed Eng       Date:  2022-04-20       Impact factor: 3.934

2.  Bayesian optimisation for efficient parameter inference in a cardiac mechanics model of the left ventricle.

Authors:  Agnieszka Borowska; Hao Gao; Alan Lazarus; Dirk Husmeier
Journal:  Int J Numer Method Biomed Eng       Date:  2022-04-07       Impact factor: 2.648

Review 3.  Multiscale simulations of left ventricular growth and remodeling.

Authors:  Hossein Sharifi; Charles K Mann; Alexus L Rockward; Mohammad Mehri; Joy Mojumder; Lik-Chuan Lee; Kenneth S Campbell; Jonathan F Wenk
Journal:  Biophys Rev       Date:  2021-08-25

4.  Calibration of Cohorts of Virtual Patient Heart Models Using Bayesian History Matching.

Authors:  Cristobal Rodero; Stefano Longobardi; Christoph Augustin; Marina Strocchi; Gernot Plank; Pablo Lamata; Steven A Niederer
Journal:  Ann Biomed Eng       Date:  2022-10-21       Impact factor: 4.219

5.  Synthesis of patient-specific multipoint 4D flow MRI data of turbulent aortic flow downstream of stenotic valves.

Authors:  Pietro Dirix; Stefano Buoso; Eva S Peper; Sebastian Kozerke
Journal:  Sci Rep       Date:  2022-09-26       Impact factor: 4.996

  5 in total

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