Literature DB >> 33950397

Protein and Small Molecule Structure Determination by the Cryo-EM Method MicroED.

Emma Danelius1,2,3, Tamir Gonen4,5,6.   

Abstract

Microcrystal Electron Diffraction (MicroED) is the newest cryo-electron microscopy (cryo-EM) method, with over 70 protein, peptide, and several small organic molecule structures already determined. In MicroED, micro- or nanocrystalline samples in solution are deposited on electron microscopy grids and examined in a cryo-electron microscope, ideally under cryogenic conditions. Continuous rotation diffraction data are collected and then processed using conventional X-ray crystallography programs. The protocol outlined here details how to obtain and identify the nanocrystals, how to set up the microscope for screening and for MicroED data collection, and how to collect and process data to complete high-resolution structures. For well-behaving crystals with high-resolution diffraction in cryo-EM, the entire process can be achieved in less than an hour.

Entities:  

Keywords:  3D Electron Crystallography; Cryo-EM; Electron Diffraction; Grid Preparation; MicroED; Microcrystal; Nanocrystal; Protein Structure; Transmission Electron Microscopy

Mesh:

Substances:

Year:  2021        PMID: 33950397     DOI: 10.1007/978-1-0716-1406-8_16

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  21 in total

1.  Electron cryotomography sample preparation using the Vitrobot.

Authors:  Cristina V Iancu; William F Tivol; Jordan B Schooler; D Prabha Dias; Gregory P Henderson; Gavin E Murphy; Elizabeth R Wright; Zhuo Li; Zhiheng Yu; Ariane Briegel; Lu Gan; Yongning He; Grant J Jensen
Journal:  Nat Protoc       Date:  2006       Impact factor: 13.491

2.  Version 1.2 of the Crystallography and NMR system.

Authors:  Axel T Brunger
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

Review 3.  How Good Can Single-Particle Cryo-EM Become? What Remains Before It Approaches Its Physical Limits?

Authors:  Robert M Glaeser
Journal:  Annu Rev Biophys       Date:  2019-02-20       Impact factor: 12.981

Review 4.  X-Ray Free-Electron Lasers for the Structure and Dynamics of Macromolecules.

Authors:  Henry N Chapman
Journal:  Annu Rev Biochem       Date:  2019-01-02       Impact factor: 23.643

Review 5.  Advances in cryo-electron tomography for biology and medicine.

Authors:  Roman I Koning; Abraham J Koster; Thomas H Sharp
Journal:  Ann Anat       Date:  2018-03-08       Impact factor: 2.698

6.  Use of a scaffold peptide in the biosynthesis of amino acid-derived natural products.

Authors:  Chi P Ting; Michael A Funk; Steve L Halaby; Zhengan Zhang; Tamir Gonen; Wilfred A van der Donk
Journal:  Science       Date:  2019-07-19       Impact factor: 47.728

7.  iMOSFLM: a new graphical interface for diffraction-image processing with MOSFLM.

Authors:  T Geoff G Battye; Luke Kontogiannis; Owen Johnson; Harold R Powell; Andrew G W Leslie
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

8.  The CryoEM Method MicroED as a Powerful Tool for Small Molecule Structure Determination.

Authors:  Christopher G Jones; Michael W Martynowycz; Johan Hattne; Tyler J Fulton; Brian M Stoltz; Jose A Rodriguez; Hosea M Nelson; Tamir Gonen
Journal:  ACS Cent Sci       Date:  2018-11-02       Impact factor: 14.553

9.  Retrieving high-resolution information from disordered 2D crystals by single-particle cryo-EM.

Authors:  Ricardo D Righetto; Nikhil Biyani; Julia Kowal; Mohamed Chami; Henning Stahlberg
Journal:  Nat Commun       Date:  2019-04-12       Impact factor: 14.919

10.  High-resolution structure determination by continuous-rotation data collection in MicroED.

Authors:  Brent L Nannenga; Dan Shi; Andrew G W Leslie; Tamir Gonen
Journal:  Nat Methods       Date:  2014-08-03       Impact factor: 28.547

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