Literature DB >> 33949190

Macrocyclic Peptides that Selectively Inhibit the Mycobacterium tuberculosis Proteasome.

Hao Zhang1, Hao-Chi Hsu2, Shoshanna C Kahne3, Ryoma Hara4, Wenhu Zhan1, Xiuju Jiang1, Kristin Burns-Huang1, Tierra Ouellette1, Toshihiro Imaeda4, Rei Okamoto4, Masanori Kawasaki4, Mayako Michino4, Tzu-Tshin Wong4, Akinori Toita4, Takafumi Yukawa4, Francesca Moraca5, Jeremie Vendome5, Priya Saha1, Kenjiro Sato4, Kazuyoshi Aso4, John Ginn4, Peter T Meinke4, Michael Foley4, Carl F Nathan1, K Heran Darwin3, Huilin Li2, Gang Lin1.   

Abstract

Treatment of tuberculosis (TB) currently takes at least 6 months. Latent Mycobacterium tuberculosis (Mtb) is phenotypically tolerant to most anti-TB drugs. A key hypothesis is that drugs that kill nonreplicating (NR) Mtb may shorten treatment when used in combination with conventional drugs. The Mtb proteasome (Mtb20S) could be such a target because its pharmacological inhibition kills NR Mtb and its genetic deletion renders Mtb unable to persist in mice. Here, we report a series of macrocyclic peptides that potently and selectively target the Mtb20S over human proteasomes, including macrocycle 6. The cocrystal structure of macrocycle 6 with Mtb20S revealed structural bases for the species selectivity. Inhibition of 20S within Mtb by 6 dose dependently led to the accumulation of Pup-tagged GFP that is degradable but resistant to depupylation and death of nonreplicating Mtb under nitrosative stress. These results suggest that compounds of this class have the potential to develop as anti-TB therapeutics.

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Year:  2021        PMID: 33949190      PMCID: PMC8194371          DOI: 10.1021/acs.jmedchem.1c00296

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   7.446


  46 in total

1.  Prokaryotic ubiquitin-like protein (Pup) is coupled to substrates via the side chain of its C-terminal glutamate.

Authors:  Markus Sutter; Fred F Damberger; Frank Imkamp; Frédéric H-T Allain; Eilika Weber-Ban
Journal:  J Am Chem Soc       Date:  2010-04-28       Impact factor: 15.419

2.  TMC-95A analogues with endocyclic biphenyl ether group as proteasome inhibitors.

Authors:  Markus Kaiser; Alexander G Milbradt; Carlo Siciliano; Irmgard Assfalg-Machleidt; Werner Machleidt; Michael Groll; Christian Renner; Luis Moroder
Journal:  Chem Biodivers       Date:  2004-01       Impact factor: 2.408

3.  Proteasome substrate capture and gate opening by the accessory factor PafE from Mycobacterium tuberculosis.

Authors:  Kuan Hu; Jordan B Jastrab; Susan Zhang; Amanda Kovach; Gongpu Zhao; K Heran Darwin; Huilin Li
Journal:  J Biol Chem       Date:  2018-02-05       Impact factor: 5.157

4.  Dop functions as a depupylase in the prokaryotic ubiquitin-like modification pathway.

Authors:  Frank Imkamp; Frank Striebel; Markus Sutter; Dennis Ozcelik; Natalie Zimmermann; Peter Sander; Eilika Weber-Ban
Journal:  EMBO Rep       Date:  2010-08-27       Impact factor: 8.807

5.  Molecular analysis of the prokaryotic ubiquitin-like protein (Pup) conjugation pathway in Mycobacterium tuberculosis.

Authors:  Francisca A Cerda-Maira; Michael J Pearce; Michele Fuortes; William R Bishai; Stevan R Hubbard; K Heran Darwin
Journal:  Mol Microbiol       Date:  2010-09       Impact factor: 3.501

6.  Structural insights on the Mycobacterium tuberculosis proteasomal ATPase Mpa.

Authors:  Tao Wang; Hua Li; Gang Lin; Chunyan Tang; Dongyang Li; Carl Nathan; K Heran Darwin; Huilin Li
Journal:  Structure       Date:  2009-10-14       Impact factor: 5.006

7.  Ubiquitin-like protein involved in the proteasome pathway of Mycobacterium tuberculosis.

Authors:  Michael J Pearce; Julian Mintseris; Jessica Ferreyra; Steven P Gygi; K Heran Darwin
Journal:  Science       Date:  2008-10-02       Impact factor: 47.728

8.  N,C-Capped dipeptides with selectivity for mycobacterial proteasome over human proteasomes: role of S3 and S1 binding pockets.

Authors:  Gang Lin; Tamutenda Chidawanyika; Christopher Tsu; Thulasi Warrier; Julien Vaubourgeix; Christopher Blackburn; Kenneth Gigstad; Michael Sintchak; Lawrence Dick; Carl Nathan
Journal:  J Am Chem Soc       Date:  2013-06-25       Impact factor: 15.419

9.  Development of a Highly Selective Plasmodium falciparum Proteasome Inhibitor with Anti-malaria Activity in Humanized Mice.

Authors:  Wenhu Zhan; Hao Zhang; John Ginn; Annie Leung; Yi J Liu; Mayako Michino; Akinori Toita; Rei Okamoto; Tzu-Tshin Wong; Toshihiro Imaeda; Ryoma Hara; Takafumi Yukawa; Sevil Chelebieva; Patrick K Tumwebaze; Maria Jose Lafuente-Monasterio; Maria Santos Martinez-Martinez; Jeremie Vendome; Thijs Beuming; Kenjiro Sato; Kazuyoshi Aso; Philip J Rosenthal; Roland A Cooper; Peter T Meinke; Carl F Nathan; Laura A Kirkman; Gang Lin
Journal:  Angew Chem Int Ed Engl       Date:  2021-03-11       Impact factor: 15.336

10.  Inhibitors selective for mycobacterial versus human proteasomes.

Authors:  Gang Lin; Dongyang Li; Luiz Pedro Sorio de Carvalho; Haiteng Deng; Hui Tao; Guillaume Vogt; Kangyun Wu; Jean Schneider; Tamutenda Chidawanyika; J David Warren; Huilin Li; Carl Nathan
Journal:  Nature       Date:  2009-09-16       Impact factor: 49.962

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  3 in total

1.  Susceptibilities of Ugandan Plasmodium falciparum Isolates to Proteasome Inhibitors.

Authors:  Shreeya Garg; Oriana Kreutzfeld; Sevil Chelebieva; Patrick K Tumwebaze; Oswald Byaruhanga; Martin Okitwi; Stephen Orena; Thomas Katairo; Samuel L Nsobya; Melissa D Conrad; Ozkan Aydemir; Jennifer Legac; Alexandra E Gould; Brett R Bayles; Jeffrey A Bailey; Maelle Duffey; Gang Lin; Laura A Kirkman; Roland A Cooper; Philip J Rosenthal
Journal:  Antimicrob Agents Chemother       Date:  2022-09-12       Impact factor: 5.938

2.  Structural basis of prokaryotic ubiquitin-like protein engagement and translocation by the mycobacterial Mpa-proteasome complex.

Authors:  Mikhail Kavalchuk; Ahmad Jomaa; Andreas U Müller; Eilika Weber-Ban
Journal:  Nat Commun       Date:  2022-01-12       Impact factor: 14.919

Review 3.  Microbial proteasomes as drug targets.

Authors:  Hao Zhang; Gang Lin
Journal:  PLoS Pathog       Date:  2021-12-09       Impact factor: 6.823

  3 in total

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