| Literature DB >> 33939263 |
Jasmeet Sidhu1,2, Manash Pratim Gogoi2, Praveen Agarwal3, Tathagata Mukherjee3, Debparna Saha2, Priyanka Bose2, Prakriti Roy2, Yogesh Phadke3, Bhatu Sonawane3, Pritha Paul2,4, Vaskar Saha1,2,4, Shekhar Krishnan1,2,4.
Abstract
BACKGROUND: The biotherapeutic asparaginase is a cornerstone of therapy in acute lymphoblastic leukaemia (ALL). With limited access to the original native Escherichia coli-derived asparaginase (EcASNase), a variety of EcASNase biogenerics are used in low-middle-income countries (LMICs). The variable quality of these biogenerics potentially influences clinical outcomes. PROCEDURE: Seven biogeneric EcASNases (P1-P7) marketed widely in India were evaluated, with P2 as an exemplar for in vivo monitoring. Therapeutic activity of P2 (10,000 IU/m2 /dose, intramuscular, every 72 hours) was monitored during induction therapy, and drug-related toxicities recorded. Molecular identity, purity and in vitro drug activity of seven biogenerics were characterised using multimodal analyses, and findings compared with reference EcASNase (R).Entities:
Keywords: asparaginase; biogeneric; outcomes; quality
Mesh:
Substances:
Year: 2021 PMID: 33939263 PMCID: PMC7613163 DOI: 10.1002/pbc.29046
Source DB: PubMed Journal: Pediatr Blood Cancer ISSN: 1545-5009 Impact factor: 3.838
Clinical characteristics of the P2 EcASNase patient cohort (N = 62)
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| Median (IQR) | 2.8 (3.9–6.1) | |
| Range | 1.4–18.2 | |
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| Male | 41 | 66 |
| Female | 21 | 34 |
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| Precursor B | 62 | 100 |
| <50 | 45 | 73 |
| ≥50 | 17 | 27 |
| Median (IQR) | 22.3(7.1–51.5) | |
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| Yes | 58 | 94 |
| No | 4 | 6 |
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| Low (<0.01%) | 44 | 71 |
| High (≥0.01%) | 18 | 29 |
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| Standard risk | 16 | 26 |
| Intermediate risk | 10 | 16 |
| High risk | 36 | 58 |
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| Hypersensitivity | 12 | 19 |
| Pancreatitis | 2 | 3 |
| Thrombosis | 0 | 0 |
Note: All hypersensitivity reactions were CTCAE grade 3. For pancreatitis, one patient each for CTCAE grade 3 and CTCAE grade 4.
Abbreviations: CTCAE, Common Terminology Criteria for Adverse Events; IQR, interquartile range.
Risk groups: Standard risk (SR) = age ≥1 to <10 years at diagnosis, presenting WBC <50 × 109/L, prednisolone good response, no high-risk cytogenetics, MRD <10-4 end of induction and no CNS disease. Intermediate risk (IR) = age ≥10 years at diagnosis or presenting WBC ≥50 × 109/L or bulky/testicular disease, prednisolone good response, no high-risk cytogenetics and no CNS disease. High risk (HR) = with high-risk cytogenetics or CNS disease or prednisolone poor response or MRD ≥10-4 end of induction.
Figure 1Subtherapeutic asparaginase activity in patients administered the P2 EcASNase biogeneric.
Box-plot representation of plasma asparaginase activity at trough (72-hour post-dose, n = 70 samples) and 48-hour post-dose timepoints (n = 47 samples) during the ALL induction treatment phase in patients (N = 62) administered P2 EcASNase intramuscularly at 10,000 IU/m2/dose every 72 hours. Adequate asparaginase activity (≥100 IU/L, horizontal dotted line) was observed in 34% (24/70) of trough timepoint samples and 70% (33/47) of 48-hour postdose samples (Mann–Whitney U test of significance, p =.00002).The interquartile ranges are indicated by boxes, whiskers indicate values 1.5 times the upper and lower quartiles, filled circles indicate outliers, median values are indicated by horizontal bold lines within boxes and ’+’ within the boxes indicate mean values
Analysis of critical quality attributes of native EcASNase biogenerics marketed in India
| Native | Reference | ||||||||
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| P1 | P2 | P3 | P4 | P5 | P6 | P7 | EcASNase | ||
| Manufacturing batches tested | 2 | 2 | 1 | 2 | 2 | 1 | 1 | 1 | |
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| Specific activity (IU/mg) | >220 | 220.2 | 243.2 |
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| 256.3 |
| Activity per 10,000 IU vial (IU) | 10,000 ± 1500 | 9381.1 |
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| 9215.5 |
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| 9556.4 |
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| Molecular weight, SEC (kDa) | 134-136 | 135.8 | 136.2 | 135.9 | 134.6 | 135.6 | 136.6 | 135.5 | 134.6 |
| Isoelectric point (pI) | 5·37 ± 0.30 |
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| 5.46 |
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| Aggregates by SEC (%) | <5% |
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| 0.8 |
| Purity by RP-HPLC (%) | >90% | 93.8 |
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| 92.0 |
| 91.8 | 92.6 | 99.2 |
| Host cell protein (ppm) | <100 | 9.0 |
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| 85.4 |
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| 2.6 |
| Bacterial endotoxin (EU/ml) | <50 | 2.0 | 1.3 | 5.1 | 1.2 | 0.4 | 11.0 | 41.0 | 0.2 |
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| Osmolality (mOsm/kg) | 250–600 | 178.5 |
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| 279 |
Note: Values outside acceptable limits are in bold font.
Abbreviations: EcASNase, Escherichia coli L-asparaginase; EU/ml, endotoxin Units/ml; kDa, kilodalton; ppm, parts per million; RP-HPLC, reversed phase high-performance liquid chromatography; SEC, size exclusion chromatography.
Figure 2Multimodal analyses indicate impurities and amino acid sequence variations in EcASNase biogenerics.
Examination of EcASNase biogenerics P1–P7 and the reference EcASNase (R) using multimodal analytical techniques, including sodium dodecyl sulphate polyacrylamide gel electrophoresis (SDS-PAGE, A), size exclusion chromatography (SEC, B) and reversed phase high-performance liquid chromatography (RP-HPLC, C). (A) Image of Coomassie-stained SDS-PAGE analysis of EcASNase products examined in reducing (‘+’) and nonreducing (‘-’) conditions confirms presence of the ~36 kDa EcASNase subunit in all products, and shows additional higher and lower molecular weight bands in the biogenerics, suggesting presence of protein impurities (M, molecular weight marker). (B) Overlay of chromatograms from SEC analyses of EcASNase products indicates that in addition to the primary peak of EcASNase, biogeneric products are characterised by additional smaller peaks with shorter retention times (inset, magnified view), suggesting the presence of higher molecular weight impurities, likely multimer aggregates of EcASNase (mAU, milli-absorbance unit). (C) Overlay of chromatograms from RP-HPLC analyses of EcASNase products indicate difference in retention times (~1 minute) between EcASNase biogenerics and the reference product, likely related to differences in hydropathicity owing to amino acid sequence variations in the biogeneric EcASNases. Additional smaller peaks with varying retention times are also observed in the biogeneric products, suggesting impurities (inset, magnified view). (AU, absorbance unit)
Protein identification by peptide mass fingerprinting
| EcASNase | Sequence coverage (%)[ | Missing sequence regions |
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| P1 | 91.1 | |
| P2 | 97.9 | 92–95;302–303 |
| P3 | 97.9 | 92–95; 302–303 |
| P4 | 94.5 | 92–95; |
| P5 | 97.9 | 92–95; 302–303 |
| P6 | 94.5 | 92–95; |
| P7 | 97.9 | 92–95; 302–303 |
| R | 98.2 | 92–95;302–303 |
Note: Protein identification by peptide mass fingerprinting indicates presence of isoforms of EcASNase in biogeneric products, suggested both by the reduced sequence coverage and distinct missing amino acid sequences (highlighted in bold, P1, P4, P6) in these products. Amino acid sequence regions 92–95 and 302–303 were not detected in all samples, indicating technical limitations in the analysis
Abbreviations: EcASNase, E. coli L-asparaginase; P1–P7, biogeneric native EcASNases; R, reference EcASNase.
With respect to the theoretical reference amino acid sequence of E. coli L-asparaginase.
Figure 3Unsatisfactory quality of EcASNase biogenerics is not identified by standard in vitro cytotoxicity studies.
Drug response profile of malignant lymphoblast cell lines with relatively high (SUP-B15) and low (REH) sensitivity in vitro to EcASNase, treated for 72 hours with EcASNase products (biogenerics P1–P6; reference product R) at serial 10-fold dilutions (0.001–1000 IU/ml) and assayed for viability using the WST-1 assay. Graph depicts pooled results from three separate experiments. Error bars represent standard errors of mean. ANOVA was used as the test for significance. Four-parameter logistic regression was used to obtain the dose response curve with the x-axis indicating log EcASNase concentration (log(U/ml)) and the y-axis indicating residual live cells as a percentage of untreated controls. 95% CI, 95% confidence interval; ANOVA, one-way analysis of variance; IC50, half maximal inhibitory concentration (IU/ml)