| Literature DB >> 33937077 |
Na Fang1, Guo-Wen Ding2, Hao Ding3, Juan Li1, Chao Liu2, Lu Lv2, Yi-Jun Shi2.
Abstract
circular RNA (circRNA) is a closed ring structure formed by cyclic covalent bonds connecting the 5'-end and 3'-end of pre-mRNA. circRNA is widely distributed in eukaryotic cells. Recent studies have shown that circRNA is involved in the pathogenesis and development of multiple types of diseases, including tumors. circRNA is specifically expressed in tissues. And the stability of circRNA is higher than that of linear RNA, which can play biological roles through sponge adsorption of miRNA, interaction with RNA binding protein, regulation of gene transcription, the mRNA and protein translation brake, and translation of protein and peptides. These characteristics render circRNAs as biomarkers and therapeutic targets of tumors. Gastrointestinal tumors are common malignancies worldwide, which seriously threaten human health. In this review, we summarize the generation and biological characteristics of circRNA, molecular regulation mechanism and related effects of circRNA in gastrointestinal tumors.Entities:
Keywords: circRNA; circular RNA; gastrointestinal tumors; miRNA; pre-mRNA
Year: 2021 PMID: 33937077 PMCID: PMC8082141 DOI: 10.3389/fonc.2021.665246
Source DB: PubMed Journal: Front Oncol ISSN: 2234-943X Impact factor: 6.244
Figure 1Different splicing sites and compositions form different circRNAs. (A) The splicing sites of pre-mRNA during the formation of intron circRNA (ciRNA) by intron circularization. (B) The splicing sites of pre-mRNA during exon and intron cyclization to form exon-intro circRNA (EIciRNA). (C-F) The splicing sites of pre-mRNA in the process exon cyclization to form exonic circRNA (ecircRNA).
Figure 2The formation modes of circRNA. (A, B) CircRNAs with intronic complementary sequence (ICS) of pre-mRNA can make the distal intron splicing sites closer in space to promote reverse splicing and ICS pair-driven cyclization. (C, D) CircRNAs with double-stranded RNA binding domain (dsRBD) can bind and pair with ICS to make the splice site closer, as well as facilitate reverse splicing to increase circRNAs formation. (E) In the exon skipping event, the exon lariat formed by the covalently combined splice acceptor and splice donor provided by the exon. (F) Intronic lariat-driven cyclization was caused by intron removal during the pre-mRNA splicing process.
Figure 3The mechanism of circRNA in gastrointestinal tumors. (A) CircRNAs can act as miRNA sponge or decoys as well as regulate the function of downstream mRNA. (B) CircRNAs with RNA binding protein (RBP) binding motifs may sponge or decoy the RBPs and regulate their functions. (C) A few circRNAs can combine with several RBPs and function as protein scaffolds to affect the tumor progressions. (D) Some circRNAs are involved in gene transcription regulation by recruiting the transcription regulators to influence promoters. (E, F) CircRNAs containing internal ribosome entry site (IRES) elements and AUG sites may act as templates as well as be translated.