Literature DB >> 33932337

Brainhack: Developing a culture of open, inclusive, community-driven neuroscience.

Rémi Gau1, Stephanie Noble2, Katja Heuer3, Katherine L Bottenhorn4, Isil P Bilgin5, Yu-Fang Yang6, Julia M Huntenburg7, Johanna M M Bayer8, Richard A I Bethlehem9, Shawn A Rhoads10, Christoph Vogelbacher11, Valentina Borghesani12, Elizabeth Levitis13, Hao-Ting Wang14, Sofie Van Den Bossche15, Xenia Kobeleva16, Jon Haitz Legarreta17, Samuel Guay18, Selim Melvin Atay19, Gael P Varoquaux20, Dorien C Huijser21, Malin S Sandström22, Peer Herholz23, Samuel A Nastase24, AmanPreet Badhwar25, Guillaume Dumas26, Simon Schwab27, Stefano Moia28, Michael Dayan29, Yasmine Bassil30, Paula P Brooks24, Matteo Mancini31, James M Shine32, David O'Connor33, Xihe Xie34, Davide Poggiali35, Patrick Friedrich36, Anibal S Heinsfeld37, Lydia Riedl38, Roberto Toro39, César Caballero-Gaudes40, Anders Eklund41, Kelly G Garner42, Christopher R Nolan43, Damion V Demeter44, Fernando A Barrios45, Junaid S Merchant46, Elizabeth A McDevitt24, Robert Oostenveld47, R Cameron Craddock48, Ariel Rokem49, Andrew Doyle50, Satrajit S Ghosh51, Aki Nikolaidis52, Olivia W Stanley53, Eneko Uruñuela28.   

Abstract

Brainhack is an innovative meeting format that promotes scientific collaboration and education in an open, inclusive environment. This NeuroView describes the myriad benefits for participants and the research community and how Brainhacks complement conventional formats to augment scientific progress.
Copyright © 2021 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Brainhack; best practices; collaboration; community building; hackathon; inclusivity; neuroscience; open science; reproducibility; training

Mesh:

Year:  2021        PMID: 33932337      PMCID: PMC9153215          DOI: 10.1016/j.neuron.2021.04.001

Source DB:  PubMed          Journal:  Neuron        ISSN: 0896-6273            Impact factor:   18.688


  8 in total

1.  Computational science: ...Error.

Authors:  Zeeya Merali
Journal:  Nature       Date:  2010-10-14       Impact factor: 49.962

2.  Atypical functional connectome hierarchy in autism.

Authors:  Seok-Jun Hong; Reinder Vos de Wael; Richard A I Bethlehem; Sara Lariviere; Casey Paquola; Sofie L Valk; Michael P Milham; Adriana Di Martino; Daniel S Margulies; Jonathan Smallwood; Boris C Bernhardt
Journal:  Nat Commun       Date:  2019-03-04       Impact factor: 14.919

3.  Everything Matters: The ReproNim Perspective on Reproducible Neuroimaging.

Authors:  David N Kennedy; Sanu A Abraham; Julianna F Bates; Albert Crowley; Satrajit Ghosh; Tom Gillespie; Mathias Goncalves; Jeffrey S Grethe; Yaroslav O Halchenko; Michael Hanke; Christian Haselgrove; Steven M Hodge; Dorota Jarecka; Jakub Kaczmarzyk; David B Keator; Kyle Meyer; Maryann E Martone; Smruti Padhy; Jean-Baptiste Poline; Nina Preuss; Troy Sincomb; Matt Travers
Journal:  Front Neuroinform       Date:  2019-02-07       Impact factor: 4.081

4.  The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments.

Authors:  Krzysztof J Gorgolewski; Tibor Auer; Vince D Calhoun; R Cameron Craddock; Samir Das; Eugene P Duff; Guillaume Flandin; Satrajit S Ghosh; Tristan Glatard; Yaroslav O Halchenko; Daniel A Handwerker; Michael Hanke; David Keator; Xiangrui Li; Zachary Michael; Camille Maumet; B Nolan Nichols; Thomas E Nichols; John Pellman; Jean-Baptiste Poline; Ariel Rokem; Gunnar Schaefer; Vanessa Sochat; William Triplett; Jessica A Turner; Gaël Varoquaux; Russell A Poldrack
Journal:  Sci Data       Date:  2016-06-21       Impact factor: 6.444

5.  Nighres: processing tools for high-resolution neuroimaging.

Authors:  Julia M Huntenburg; Christopher J Steele; Pierre-Louis Bazin
Journal:  Gigascience       Date:  2018-07-01       Impact factor: 6.524

6.  Combining Citizen Science and Deep Learning to Amplify Expertise in Neuroimaging.

Authors:  Anisha Keshavan; Jason D Yeatman; Ariel Rokem
Journal:  Front Neuroinform       Date:  2019-05-08       Impact factor: 4.081

7.  The Open Brain Consent: Informing research participants and obtaining consent to share brain imaging data.

Authors:  Elise Bannier; Gareth Barker; Valentina Borghesani; Nils Broeckx; Patricia Clement; Kyrre E Emblem; Satrajit Ghosh; Enrico Glerean; Krzysztof J Gorgolewski; Marko Havu; Yaroslav O Halchenko; Peer Herholz; Anne Hespel; Stephan Heunis; Yue Hu; Chuan-Peng Hu; Dorien Huijser; María de la Iglesia Vayá; Radim Jancalek; Vasileios K Katsaros; Marie-Luise Kieseler; Camille Maumet; Clara A Moreau; Henk-Jan Mutsaerts; Robert Oostenveld; Esin Ozturk-Isik; Nicolas Pascual Leone Espinosa; John Pellman; Cyril R Pernet; Francesca Benedetta Pizzini; Amira Šerifović Trbalić; Paule-Joanne Toussaint; Matteo Visconti di Oleggio Castello; Fengjuan Wang; Cheng Wang; Hua Zhu
Journal:  Hum Brain Mapp       Date:  2021-02-01       Impact factor: 5.038

Review 8.  Brainhack: a collaborative workshop for the open neuroscience community.

Authors:  R Cameron Craddock; Daniel S Margulies; Pierre Bellec; B Nolan Nichols; Sarael Alcauter; Fernando A Barrios; Yves Burnod; Christopher J Cannistraci; Julien Cohen-Adad; Benjamin De Leener; Sebastien Dery; Jonathan Downar; Katharine Dunlop; Alexandre R Franco; Caroline Seligman Froehlich; Andrew J Gerber; Satrajit S Ghosh; Thomas J Grabowski; Sean Hill; Anibal Sólon Heinsfeld; R Matthew Hutchison; Prantik Kundu; Angela R Laird; Sook-Lei Liew; Daniel J Lurie; Donald G McLaren; Felipe Meneguzzi; Maarten Mennes; Salma Mesmoudi; David O'Connor; Erick H Pasaye; Scott Peltier; Jean-Baptiste Poline; Gautam Prasad; Ramon Fraga Pereira; Pierre-Olivier Quirion; Ariel Rokem; Ziad S Saad; Yonggang Shi; Stephen C Strother; Roberto Toro; Lucina Q Uddin; John D Van Horn; John W Van Meter; Robert C Welsh; Ting Xu
Journal:  Gigascience       Date:  2016-03-31       Impact factor: 6.524

  8 in total
  5 in total

1.  A large, curated, open-source stroke neuroimaging dataset to improve lesion segmentation algorithms.

Authors:  Sook-Lei Liew; Bethany P Lo; Miranda R Donnelly; Artemis Zavaliangos-Petropulu; Jessica N Jeong; Giuseppe Barisano; Alexandre Hutton; Julia P Simon; Julia M Juliano; Anisha Suri; Zhizhuo Wang; Aisha Abdullah; Jun Kim; Tyler Ard; Nerisa Banaj; Michael R Borich; Lara A Boyd; Amy Brodtmann; Cathrin M Buetefisch; Lei Cao; Jessica M Cassidy; Valentina Ciullo; Adriana B Conforto; Steven C Cramer; Rosalia Dacosta-Aguayo; Ezequiel de la Rosa; Martin Domin; Adrienne N Dula; Wuwei Feng; Alexandre R Franco; Fatemeh Geranmayeh; Alexandre Gramfort; Chris M Gregory; Colleen A Hanlon; Brenton G Hordacre; Steven A Kautz; Mohamed Salah Khlif; Hosung Kim; Jan S Kirschke; Jingchun Liu; Martin Lotze; Bradley J MacIntosh; Maria Mataró; Feroze B Mohamed; Jan E Nordvik; Gilsoon Park; Amy Pienta; Fabrizio Piras; Shane M Redman; Kate P Revill; Mauricio Reyes; Andrew D Robertson; Na Jin Seo; Surjo R Soekadar; Gianfranco Spalletta; Alison Sweet; Maria Telenczuk; Gregory Thielman; Lars T Westlye; Carolee J Winstein; George F Wittenberg; Kristin A Wong; Chunshui Yu
Journal:  Sci Data       Date:  2022-06-16       Impact factor: 8.501

Review 2.  The normative modeling framework for computational psychiatry.

Authors:  Henricus G Ruhe; Christian F Beckmann; Andre F Marquand; Saige Rutherford; Seyed Mostafa Kia; Thomas Wolfers; Charlotte Fraza; Mariam Zabihi; Richard Dinga; Pierre Berthet; Amanda Worker; Serena Verdi
Journal:  Nat Protoc       Date:  2022-06-01       Impact factor: 17.021

Review 3.  Cross disorder comparisons of brain structure in schizophrenia, bipolar disorder, major depressive disorder, and 22q11.2 deletion syndrome: A review of ENIGMA findings.

Authors:  Eun-Jin Cheon; Carrie E Bearden; Daqiang Sun; Christopher R K Ching; Ole A Andreassen; Lianne Schmaal; Dick J Veltman; Sophia I Thomopoulos; Peter Kochunov; Neda Jahanshad; Paul M Thompson; Jessica A Turner; Theo G M van Erp
Journal:  Psychiatry Clin Neurosci       Date:  2022-02-26       Impact factor: 12.145

4.  A protocol for working with open-source neuroimaging datasets.

Authors:  Corey Horien; Kangjoo Lee; Margaret L Westwater; Stephanie Noble; Link Tejavibulya; Teimur Kayani; R Todd Constable; Dustin Scheinost
Journal:  STAR Protoc       Date:  2022-01-08

Review 5.  Recent Technical Advances in Accelerating the Clinical Translation of Small Animal Brain Imaging: Hybrid Imaging, Deep Learning, and Transcriptomics.

Authors:  Wuwei Ren; Bin Ji; Yihui Guan; Lei Cao; Ruiqing Ni
Journal:  Front Med (Lausanne)       Date:  2022-03-24
  5 in total

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