| Literature DB >> 33926960 |
Octavian C Ioachimescu1,2, José A Ramos3, Michael Hoffman3, James K Stoller4.
Abstract
BACKGROUND: In spirometry, the area under expiratory flow-volume curve (AEX-FV) was found to perform well in diagnosing and stratifying physiologic impairments, potentially lessening the need for complex lung volume testing. Expanding on prior work, this study assesses the accuracy and the utility of several models of estimating AEX-FV based on forced vital capacity (FVC) and several instantaneous flows. These models could be incorporated in regular spirometry reports, especially when actual AEX-FV measurements are not available.Entities:
Keywords: lung physiology; respiratory measurement
Year: 2021 PMID: 33926960 PMCID: PMC8094381 DOI: 10.1136/bmjresp-2021-000925
Source DB: PubMed Journal: BMJ Open Respir Res ISSN: 2052-4439
Figure 1Two examples of how AEX-FV4 reconstruction or approximation by the triangle-and-trapezoid method using PEF, FEF25, FEF50 and FEF75 could overestimate (A) or underestimate (B) the actual AEX-FV. AEX-FV, area under expiratory flow-volume curve; FVC, forced vital capacity; FEF25, FEF50 and FEF75, forced expiratory flows at 25%, 50% and 75%; PEF, peak expiratory flow.
Figure 2Distribution of the variable square root of AEX-FV (Sqrt AEX-FV) illustrated as a shadowgram and main quantiles; estimates of the distribution and dispersion, and the PP plot for a normal distribution fit. Which shows the relationship between the empirical cumulative distribution function (CDF) and the fitted CDF obtained using the estimated parameters. AEX-FV, area under expiratory flow-volume curve; PP plot, percentile-percentile plot.
Simple linear regression model without interactions for predicting square root AEX-FV
| Term | Estimate | SE | T ratio | Prob >|T| | VIF | Main effect | R2 | RASE |
| Intercept | −0.070 | 0.007 | −10.027 | <0.0001 | – | – | T: 0.993 | |
| FVC | 0.501 | 0.002 | 218.464 | <0.0001 | 2.48 | 0.24 | ||
| PEF | 0.062 | 0.002 | 37.790 | <0.0001 | 5.24 | 0.21 | ||
| FEF25 | 0.097 | 0.002 | 51.527 | <0.0001 | 5.88 | 0.20 | V: 0.993 | V: 0.077 |
| FEF50 | 0.118 | 0.002 | 47.515 | <0.0001 | 4.98 | 0.19 | ||
| FEF75 | 0.168 | 0.005 | 35.138 | <0.0001 | 3.19 | 0.16 |
In both training (T, n=2577) and validation (V, n=1057) sets, model’s R2 was 0.993 and RASE was 0.078–0.077.
AEX-FV, area under expiratory flow-volume curve; FEF25, forced expiratory flow at 25%; FVC, forced vital capacity; PEF, peak expiratory flow; RASE, root average square error; VIF, variance inflation factor.
Linear regression model with interactions for predicting square root AEX-FV
| Term | Estimate | Std error | T ratio | Prob >|T| | VIF | Main effect | R2 | RASE |
| Intercept | −0.084 | 0.007 | −11.598 | <0.0001 | – | – | T: 0.994 | T: 0.074 |
| FVC | 0.497 | 0.002 | 220.145 | <0.0001 | 2.63 | 0.24 | ||
| PEF | 0.065 | 0.002 | 37.790 | <0.0001 | 6.33 | 0.20 | ||
| FEF25 | 0.096 | 0.002 | 47.751 | <0.0001 | 7.41 | 0.20 | ||
| FEF50 | 0.118 | 0.003 | 45.661 | <0.0001 | 5.90 | 0.19 | ||
| FEF75 | 0.182 | 0.005 | 33.196 | <0.0001 | 4.57 | 0.16 | ||
| (PEF-8.75238)·(FEF25-7.10942) | −0.003 | 0.001 | −5.385 | <0.0001 | 5.40 | |||
| (PEF-8.75238)·(FVC-4.11503) | −0.002 | 0.002 | −1.448 | 0.1476 | 6.74 | V: 0.994 | V: 0.075 | |
| (PEF-8.75238)·(FEF50-3.71047) | −0.006 | 0.002 | −2.660 | 0.0079 | 22.28 | |||
| (PEF-8.75238)·(FEF75-1.0233) | 0.014 | 0.005 | 2.870 | 0.0041 | 17.35 | |||
| (FEF25-7.10942)·(FVC-4.11503) | 0.012 | 0.002 | 5.441 | <0.0001 | 12.33 | |||
| (FEF25-7.10942)·(FEF50-3.71047) | 0.002 | 0.002 | 1.148 | 0.2510 | 16.86 | |||
| (FEF25-7.10942)·(FEF75-1.0233) | −0.004 | 0.005 | −0.754 | 0.4506 | 20.73 | |||
| (FVC-4.11503)·(FEF50-3.71047) | 0.014 | 0.003 | 4.513 | <0.0001 | 11.07 | |||
| (FVC-4.11503)·(FEF75-1.0233) | −0.021 | 0.005 | −3.875 | 0.0001 | 6.57 | |||
| (FEF50-3.71047)·(FEF75-1.0233) | −0.019 | 0.003 | −6.096 | <0.0001 | 5.39 |
In both training (T, n=2577) and validation (V, n=1057) sets, model’s R2 was ~0.994 and RASE was 0.074–0.075.
AEX-FV, area under expiratory flow-volume curve; FEF25, forced expiratory flow at 25%; FVC, forced vital capacity; PEF, peak expiratory flow; RASE, root average square error; VIF, variance inflation factor.
Model Comparisons between linear regression (standard least squares) and various techniques of optimisation (generalised regression) for predicting square root AEX-FV
| Response distribution | Estimation method | AICc | BIC | Generalised R2 (T) | Generalised R2 (V) | RASE (T) | RASE (V) | Lambda (penalty, T) |
| Normal | Standard Least Squares | −5843.0 | −5802.1 | 0.993 | 0.993 | 0.078 | 0.077 | – |
| Normal | Ridge | −5843.0 | −5802.1 | 0.993 | 0.993 | 0.078 | 0.077 | 0.000 |
| Normal | Lasso | −5841.8 | −5800.9 | 0.993 | 0.993 | 0.078 | 0.077 | 0.071 |
| Normal | Adaptive Lasso | −5843.0 | −5802.1 | 0.993 | 0.993 | 0.078 | 0.077 | 0.000 |
| Normal | Elastic Net | −5842.2 | −5801.3 | 0.993 | 0.993 | 0.078 | 0.077 | 0.050 |
| Normal | Adaptive Elastic Net | −5843.0 | −5802.1 | 0.993 | 0.993 | 0.078 | 0.077 | 0.000 |
| Normal | Double Lasso | −5841.8 | −5800.9 | 0.993 | 0.993 | 0.078 | 0.077 | 0.071 |
| Normal | Adaptive Double Lasso | −5843.0 | −5802.1 | 0.993 | 0.993 | 0.078 | 0.077 | 0.000 |
| Gamma | Maximum Likelihood | −1812.5 | −1771.5 | 0.969 | 0.968 | – | – | – |
| Gamma | Ridge | −1793.6 | −1752.7 | 0.969 | 0.969 | – | – | 10.708 |
| Gamma | Lasso | −1808.3 | −1767.4 | 0.969 | 0.968 | – | – | 38.550 |
| Gamma | Adaptive Lasso | −1812.5 | −1771.5 | 0.969 | 0.968 | – | – | 0.000 |
| Gamma | Elastic Net | −1807.2 | −1766.3 | 0.969 | 0.968 | – | – | 42.452 |
| Gamma | Adaptive Elastic Net | −1812.5 | −1771.5 | 0.969 | 0.968 | – | – | 0.000 |
| Gamma | Double Lasso | −1808.3 | −1767.4 | 0.969 | 0.968 | – | – | 38.550 |
| Gamma | Adaptive Double Lasso | −1812.5 | −1771.5 | 0.969 | 0.968 | – | – | 0.000 |
| LogNormal | Maximum Likelihood | −1355.9 | −1315.0 | 0.965 | 0.966 | – | – | – |
| LogNormal | Ridge | −1339.8 | −1298.9 | 0.965 | 0.966 | – | – | 8.279 |
| LogNormal | Lasso | −1353.4 | −1312.5 | 0.965 | 0.966 | – | – | 26.082 |
| LogNormal | Adaptive Lasso | −1355.9 | −1315.0 | 0.965 | 0.966 | – | – | 0.000 |
| LogNormal | Elastic Net | −1352.4 | −1311.5 | 0.965 | 0.966 | – | – | 30.105 |
| LogNormal | Adaptive Elastic Net | −1355.9 | −1315.0 | 0.965 | 0.966 | – | – | 0.000 |
| LogNormal | Double Lasso | −1353.4 | −1312.5 | 0.965 | 0.966 | – | – | 26.082 |
| LogNormal | Adaptive Double Lasso | −1355.9 | −1315.0 | 0.965 | 0.966 | – | – | 0.000 |
In both training (T, n=2577) and validation (V, n=1057) sets, the models’ R2 was between 0.993 and 0.965 and RASE between 0.078 and 0.077. The lambda penalty coefficient was included, where appropriate.
AEX-FV, area under expiratory flow-volume curve; AICc, Akaike Information Criterion; BIC, Bayesian Information Criterion; RASE, root average square error.
Figure 3(A) Neural network architecture, model performance and variable importance. The average of the absolute values of the differences between the response and the predicted response. (B) Prediction and contour profilers for the neural network model. (C) Actual and residual Sqrt AEX values versus predicted Sqrt AEX. AEX-FV, area under expiratory flow-volume curve; FVC, forced vital capacity; FEF25, FEF50 and FEF75, forced expiratory flows at 25%, 50% and 75%; mean abs dev, mean absolute deviance; PEF, peak expiratory flow; RMSE, root mean square error; SSE, sum of squares error.