Literature DB >> 33924582

Gamma-Glutamyl Transferase (GGT) Is the Leading External Quality Assurance Predictor of ISO15189 Compliance for Pathology Laboratories.

Brett A Lidbury1, Gus Koerbin2, Alice M Richardson1,3, Tony Badrick1,4.   

Abstract

Pathology results are central to modern medical practice, informing diagnosis and patient management. To ensure high standards from pathology laboratories, regulators require compliance with international and local standards. In Australia, the monitoring and regulation of medical laboratories are achieved by conformance to ISO15189-National Pathology Accreditation Advisory Council standards, as assessed by the National Association of Testing Authorities (NATA), and an external quality assurance (EQA) assessment via the Royal College of Pathologists of Australasia Quality Assurance Program (RCPAQAP). While effective individually, integration of data collected by NATA and EQA testing promises advantages for the early detection of technical or management problems in the laboratory, and enhanced ongoing quality assessment. Random forest (RF) machine learning (ML) previously identified gamma-glutamyl transferase (GGT) as a leading predictor of NATA compliance condition reporting. In addition to further RF investigations, this study also deployed single decision trees and support vector machines (SVM) models that included creatinine, electrolytes and liver function test (LFT) EQA results. Across all analyses, GGT was consistently the top-ranked predictor variable, validating previous observations from Australian laboratories. SVM revealed broad patterns of predictive EQA marker interactions with NATA outcomes, and the distribution of GGT relative deviation suggested patterns by which to identify other strong EQA predictors of NATA outcomes. An integrated model of pathology quality assessment was successfully developed, via the prediction of NATA outcomes by EQA results. GGT consistently ranked as the best predictor variable, identified by combining recursive partitioning and SVM ML strategies.

Entities:  

Keywords:  ISO 15189; external quality assurance; machine learning and prediction; pathology

Year:  2021        PMID: 33924582      PMCID: PMC8069573          DOI: 10.3390/diagnostics11040692

Source DB:  PubMed          Journal:  Diagnostics (Basel)        ISSN: 2075-4418


  19 in total

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2.  Patient-Based Real-Time Quality Control: Review and Recommendations.

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3.  Once upon a time: a tale of ISO 15189 accreditation.

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4.  Maintaining quality diagnosis with digital pathology: a practical guide to ISO 15189 accreditation.

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Review 5.  Digital pathology: semper ad meliora.

Authors:  Simone L Van Es
Journal:  Pathology       Date:  2018-12-03       Impact factor: 5.306

6.  Integrated Pathology Informatics Enables High-Quality Personalized and Precision Medicine: Digital Pathology and Beyond.

Authors:  Zoya Volynskaya; Hung Chow; Andrew Evans; Alan Wolff; Cecilia Lagmay-Traya; Sylvia L Asa
Journal:  Arch Pathol Lab Med       Date:  2017-08-29       Impact factor: 5.534

7.  A computer model for professional competence assessment according to ISO 15189.

Authors:  Claudia Bellini; Francesca Cinci; Carlo Scapellato; Roberto Guerranti
Journal:  Clin Chem Lab Med       Date:  2020-07-28       Impact factor: 3.694

8.  Infection status outcome, machine learning method and virus type interact to affect the optimised prediction of hepatitis virus immunoassay results from routine pathology laboratory assays in unbalanced data.

Authors:  Alice M Richardson; Brett A Lidbury
Journal:  BMC Bioinformatics       Date:  2013-06-25       Impact factor: 3.169

9.  Enhancement of hepatitis virus immunoassay outcome predictions in imbalanced routine pathology data by data balancing and feature selection before the application of support vector machines.

Authors:  Alice M Richardson; Brett A Lidbury
Journal:  BMC Med Inform Decis Mak       Date:  2017-08-14       Impact factor: 2.796

Review 10.  Computational pathology definitions, best practices, and recommendations for regulatory guidance: a white paper from the Digital Pathology Association.

Authors:  Esther Abels; Liron Pantanowitz; Famke Aeffner; Mark D Zarella; Jeroen van der Laak; Marilyn M Bui; Venkata Np Vemuri; Anil V Parwani; Jeff Gibbs; Emmanuel Agosto-Arroyo; Andrew H Beck; Cleopatra Kozlowski
Journal:  J Pathol       Date:  2019-09-03       Impact factor: 7.996

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